version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2783 65.58 0 3076441..3077265 + 274 115352839 queF Bamb_2788 - 7-cyano-7-deazaguanine reductase 2784 64.86 0 3077392..3077778 - 128 115352840 - Bamb_2789 - endoribonuclease L-PSP 2785 70.72 0 3077901..3079382 - 493 115352841 - Bamb_2790 - N-acyl-D-amino-acid deacylase 2786 69.54 0 3079385..3080359 - 324 115352842 - Bamb_2791 - RpiR family transcriptional regulator 2787 68.54 0 3080438..3081718 + 426 115352843 - Bamb_2792 - amino acid aldolase or racemase-like protein 2788 68.04 0 3081883..3082464 + 193 115352844 - Bamb_2793 - PfpI family intracellular peptidase 2789 66.24 0 3082586..3083059 - 157 115352845 - Bamb_2794 - MarR family transcriptional regulator 2790 67.73 0 3083068..3084663 - 531 115352846 - Bamb_2795 - major facilitator transporter 2791 68.09 0 3084771..3085613 + 280 115352847 - Bamb_2796 - hypothetical protein 2792 71.55 +1 3085583..3086545 - 320 115352848 - Bamb_2797 - alpha/beta hydrolase domain-containing protein 2793 70.57 0 3086648..3087082 - 144 115352849 - Bamb_2798 - CHRD domain-containing protein 2794 69.06 0 3087497..3088498 + 333 115352850 - Bamb_2799 - hypothetical protein 2795 65.76 0 3088518..3089291 - 257 115352851 - Bamb_2800 - hypothetical protein 2796 68.52 0 3089572..3091194 - 540 115352852 - Bamb_2801 - phospholipase D/transphosphatidylase 2797 71.57 +1 3091429..3092142 - 237 115352853 - Bamb_2802 - GntR domain-containing protein 2798 70.29 0 3092284..3093084 + 266 115352854 - Bamb_2803 - hypothetical protein 2799 75.07 +1 3093081..3093806 + 241 115352855 - Bamb_2804 - hypothetical protein 2800 70.26 0 3093803..3095248 + 481 115352856 - Bamb_2805 - iron-sulfur cluster binding protein 2801 69.37 0 3095300..3097000 + 566 115352857 - Bamb_2806 - L-lactate transport 2802 62.73 0 3097112..3097873 - 253 115352858 - Bamb_2807 - peptidase M48, Ste24p 2803 71.38 +1 3098023..3098829 - 268 115352859 - Bamb_2808 - glycosyl transferase family protein 2804 71.77 +1 3098955..3100247 - 430 115352860 - Bamb_2809 - endoribonuclease L-PSP 2805 69.74 0 3100345..3101061 - 238 115352861 - Bamb_2810 - short chain dehydrogenase 2806 61.40 -1 3101169..3101453 - 94 115352862 - Bamb_2811 - acyl carrier protein 2807 72.56 +1 3102019..3102663 + 214 115352863 - Bamb_2812 - membrane protein-like protein 2808 72.02 +1 3102660..3104489 + 609 115352864 - Bamb_2813 - Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases-like protein 2809 71.08 0 3104486..3105460 + 324 115352865 - Bamb_2814 - acyltransferase-like protein 2810 69.92 0 3105457..3106101 + 214 115352866 - Bamb_2815 - hypothetical protein 2811 73.60 +1 3106101..3108581 + 826 115352867 - Bamb_2816 - exporter-like protein 2812 73.64 +1 3108578..3109480 + 300 115352868 - Bamb_2817 - polysaccharide deacetylase 2813 71.24 +1 3109544..3110767 + 407 115352869 - Bamb_2818 - 3-oxoacyl-(acyl carrier protein) synthase I 2814 72.65 +1 3110764..3111582 + 272 115352870 - Bamb_2819 - hypothetical protein 2815 71.54 +1 3111579..3112112 + 177 115352871 - Bamb_2820 - 3-hydroxylacyl-(acyl carrier protein) dehydratase-like protein 2816 62.54 -1 3112135..3112425 + 96 115352872 - Bamb_2821 - hypothetical protein 2817 72.31 +1 3112506..3112877 - 123 115352873 - Bamb_2822 - hypothetical protein 2818 62.77 0 3112906..3113649 - 247 115352874 - Bamb_2823 - acetoacetyl-CoA reductase 2819 69.88 0 3113867..3115048 - 393 115352875 - Bamb_2824 - acetyl-CoA acetyltransferase 2820 68.04 0 3115325..3115906 - 193 115352876 - Bamb_2825 - phasin family protein 2821 64.58 0 3116383..3117147 - 254 115352877 - Bamb_2826 - cobyrinic acid a,c-diamide synthase 2822 64.86 0 3117363..3117584 + 73 115352878 - Bamb_2827 - hypothetical protein 2823 63.49 0 3118059..3118310 + 83 115352879 - Bamb_2828 - hypothetical protein 2824 66.46 0 3118284..3119228 - 314 115352880 - Bamb_2829 - pili assembly chaperone 2825 67.58 0 3119218..3120642 - 474 115352881 - Bamb_2830 - hypothetical protein 2826 67.79 0 3120738..3123401 - 887 115352882 - Bamb_2831 - fimbrial biogenesis outer membrane usher protein 2827 63.77 0 3123527..3124285 - 252 115352883 - Bamb_2832 - pili assembly chaperone 2828 63.88 0 3124396..3125004 - 202 115352884 - Bamb_2833 - fimbrial protein 2829 66.34 0 3125272..3127698 - 808 115352885 - Bamb_2834 - Hpt sensor hybrid histidine kinase 2830 61.97 -1 3127705..3128385 - 226 115352886 - Bamb_2835 - two component LuxR family transcriptional regulator 2831 56.90 -2 3128996..3129343 + 115 115352887 - Bamb_2836 - transposase IS3/IS911 family protein 2832 68.62 0 3129875..3130438 - 187 115352888 - Bamb_2837 - single-strand DNA-binding protein 2833 66.58 0 3130542..3131729 - 395 115352889 - Bamb_2838 - major facilitator transporter 2834 66.63 0 3131982..3134867 + 961 115352890 - Bamb_2839 - excinuclease ABC, A subunit 2835 64.64 0 3135125..3136207 + 360 115352891 - Bamb_2840 - putative transporter 2836 65.08 0 3136313..3137197 - 294 115352892 purU Bamb_2841 - formyltetrahydrofolate deformylase 2837 70.98 0 3137248..3138105 - 285 115352893 - Bamb_2842 - NUDIX hydrolase 2838 68.78 0 3138111..3138725 - 204 115352894 - Bamb_2843 - lysine exporter protein LysE/YggA 2839 68.43 0 3138752..3139318 - 188 115352895 - Bamb_2844 - adenine phosphoribosyltransferase 2840 68.50 0 3139397..3141409 - 670 115352896 - Bamb_2845 - sodium/hydrogen exchanger 2841 69.92 0 3141529..3142512 + 327 115352897 - Bamb_2846 - KpsF/GutQ family protein 2842 70.58 0 3142512..3143048 + 178 115352898 - Bamb_2847 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 2843 65.85 0 3143052..3143666 + 204 115352899 - Bamb_2848 - hypothetical protein 2844 68.17 0 3143687..3144352 + 221 115352900 - Bamb_2849 - OstA family protein 2845 65.77 0 3144349..3145125 + 258 115352901 - Bamb_2850 - ABC transporter related 2846 64.61 0 3145296..3146801 + 501 115352902 - Bamb_2851 - RNA polymerase factor sigma-54 2847 55.56 -2 3146959..3147318 + 119 115352903 - Bamb_2852 - sigma 54 modulation protein/ribosomal protein S30EA 2848 62.41 -1 3147488..3148027 + 179 115352904 - Bamb_2853 - putative PTS IIA-like nitrogen-regulatory protein PtsN 2849 66.67 0 3148157..3149125 + 322 115352905 - Bamb_2854 - HPr kinase/phosphorylase 2850 64.74 0 3149174..3150109 + 311 115352906 - Bamb_2855 - hypothetical protein 2851 66.19 0 3150136..3150771 + 211 115352907 - Bamb_2856 - peptidase S16, lon domain-containing protein 2852 71.45 +1 3150908..3152014 - 368 115352908 - Bamb_2857 - A/G-specific adenine glycosylase 2853 69.71 0 3152050..3152904 - 284 115352909 - Bamb_2858 - formamidopyrimidine-DNA glycosylase 2854 68.86 0 3152964..3154787 + 607 115352910 - Bamb_2859 - TPR repeat-containing protein 2855 70.37 0 3154787..3155407 + 206 115352911 lolB Bamb_2860 - outer membrane lipoprotein LolB 2856 59.98 -1 3155435..3156316 + 293 115352912 - Bamb_2861 - 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 2857 62.82 0 3156491..3157453 + 320 115352913 - Bamb_2862 - ribose-phosphate pyrophosphokinase 2858 62.07 -1 3157615..3158223 + 202 115352914 - Bamb_2863 - 50S ribosomal protein L25/general stress protein Ctc 2859 68.00 0 3158353..3158952 + 199 115352915 - Bamb_2864 - peptidyl-tRNA hydrolase 2860 66.85 0 3159078..3160145 + 355 115352916 - Bamb_2865 - histidinol-phosphate aminotransferase 2861 60.30 -1 3160250..3160516 - 88 115352917 - Bamb_2866 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2862 60.04 -1 3160576..3161073 - 165 115352918 coaD Bamb_2867 - phosphopantetheine adenylyltransferase 2863 72.81 +1 3161185..3161868 - 227 115352919 - Bamb_2868 - putative methyltransferase 2864 66.93 0 3162001..3163161 + 386 115352920 - Bamb_2869 - signal recognition particle-docking protein FtsY 2865 64.06 0 3163271..3163960 - 229 115352921 - Bamb_2870 - maleylacetoacetate isomerase 2866 72.27 +1 3164081..3165079 + 332 115352922 - Bamb_2871 - hypothetical protein 2867 68.06 0 3165470..3167116 + 548 115352923 - Bamb_2872 - 2-isopropylmalate synthase 2868 65.36 0 3167260..3167643 - 127 115352924 - Bamb_2873 - hypothetical protein 2869 61.58 -1 3167689..3168258 - 189 115352925 - Bamb_2874 - hypothetical protein 2870 65.38 0 3168619..3169554 + 311 115352926 - Bamb_2875 - RNA polymerase factor sigma-32 2871 64.16 0 3169894..3170172 + 92 115352927 - Bamb_2876 - hypothetical protein 2872 63.62 0 3170162..3171739 + 525 115352928 - Bamb_2877 - cytochrome bd ubiquinol oxidase, subunit I 2873 67.19 0 3171771..3172907 + 378 115352929 - Bamb_2878 - cytochrome d ubiquinol oxidase, subunit II 2874 64.23 0 3172963..3173085 + 40 115352930 - Bamb_2879 - cyd operon protein YbgT 2875 70.81 0 3173679..3176162 + 827 115352931 - Bamb_2880 - Beta-N-acetylhexosaminidase 2876 69.00 0 3176473..3178230 - 585 115352932 - Bamb_2881 - PTS system, N-acetylglucosamine-specific IIBC subunit 2877 72.20 +1 3178318..3180900 - 860 115352933 - Bamb_2882 - phosphoenolpyruvate-protein phosphotransferase 2878 71.53 +1 3180916..3181923 - 335 115352934 - Bamb_2883 - glutamine--fructose-6-phosphate transaminase (isomerizing) 2879 69.38 0 3181916..3183019 - 367 115352935 - Bamb_2884 - N-acetylglucosamine-6-phosphate deacetylase 2880 70.88 0 3183137..3183871 - 244 115352936 - Bamb_2885 - GntR family transcriptional regulator 2881 67.69 0 3184200..3187415 - 1071 115352937 dnaE2 Bamb_2886 - error-prone DNA polymerase 2882 75.20 +1 3187422..3188909 - 495 115352938 - Bamb_2887 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0