version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2695 66.31 0 2974022..2974870 + 282 115352751 - Bamb_2700 - two component transcriptional regulator 2696 71.69 +1 2974887..2976440 + 517 115352752 - Bamb_2701 - periplasmic sensor signal transduction histidine kinase 2697 65.04 0 2976681..2978339 + 552 115352753 - Bamb_2702 - major facilitator transporter 2698 66.46 0 2978643..2979614 - 323 115352754 - Bamb_2703 - LysR family transcriptional regulator 2699 72.34 +1 2979802..2980770 - 322 115352755 - Bamb_2704 - AraC family transcriptional regulator 2700 71.35 +1 2980885..2981568 + 227 115352756 - Bamb_2705 - ThiJ/PfpI domain-containing protein 2701 64.74 0 2981628..2981939 + 103 115352757 - Bamb_2706 - cupin 2 domain-containing protein 2702 66.32 0 2981983..2982267 - 94 115352758 - Bamb_2707 - hypothetical protein 2703 68.99 0 2982395..2983597 - 400 115352759 - Bamb_2708 - porin 2704 71.15 0 2983711..2985183 - 490 115352760 - Bamb_2709 - amidase 2705 69.17 0 2985216..2986532 - 438 115352761 - Bamb_2710 - major facilitator transporter 2706 67.86 0 2986754..2987674 + 306 115352762 - Bamb_2711 - LysR family transcriptional regulator 2707 63.29 0 2987964..2988851 + 295 115352763 - Bamb_2712 - LysR family transcriptional regulator 2708 59.62 -1 2988918..2989442 + 174 115352764 - Bamb_2713 - HMG-I and HMG-Y, DNA-binding domain-containing protein 2709 57.95 -2 2989442..2990278 + 278 115352765 - Bamb_2714 - integrase catalytic subunit 2710 68.53 0 2990545..2993652 + 1035 115352766 - Bamb_2715 - glycosyl transferase family protein 2711 63.22 0 2993687..2994034 - 115 115352767 - Bamb_2716 - glutathione-dependent formaldehyde-activating, GFA 2712 70.28 0 2994188..2994436 + 82 115352768 - Bamb_2717 - hypothetical protein 2713 69.43 0 2994464..2995222 - 252 115352769 - Bamb_2718 - GntR domain-containing protein 2714 66.75 0 2995302..2996450 + 382 115352770 - Bamb_2719 - mandelate racemase/muconate lactonizing protein 2715 72.35 +1 2996611..2997543 - 310 115352771 - Bamb_2720 - copper resistance D domain-containing protein 2716 68.99 0 2997999..2998688 + 229 115352772 - Bamb_2721 - cytochrome c, class I 2717 64.67 0 2998708..3000006 + 432 115352773 - Bamb_2722 - cytochrome c, class I 2718 68.61 0 3000136..3001578 + 480 115352774 - Bamb_2723 - DEAD/DEAH box helicase domain-containing protein 2719 70.20 0 3001572..3002081 - 169 115352775 - Bamb_2724 - hypothetical protein 2720 62.44 -1 3002148..3002975 - 275 115352776 - Bamb_2725 - hypothetical protein 2721 69.65 0 3003290..3004930 - 546 115352777 - Bamb_2726 - gamma-glutamyltransferase 2722 67.81 0 3005062..3005934 + 290 115352778 - Bamb_2727 - DeoR family transcriptional regulator 2723 57.58 -2 3006240..3006437 + 65 115352779 - Bamb_2728 - hypothetical protein 2724 69.65 0 3006527..3006895 - 122 115352780 - Bamb_2729 - hypothetical protein 2725 69.55 0 3007058..3008581 + 507 115352781 glpD Bamb_2730 - glycerol-3-phosphate dehydrogenase 2726 67.07 0 3008687..3010189 + 500 115352782 glpK Bamb_2731 - glycerol kinase 2727 67.78 0 3010274..3010990 + 238 115352783 - Bamb_2732 - MIP family channel protein 2728 73.86 +1 3011120..3012370 - 416 115352784 - Bamb_2733 - FAD-dependent pyridine nucleotide-disulphide oxidoreductase 2729 65.70 0 3012375..3012683 - 102 115352785 - Bamb_2734 - Rieske (2Fe-2S) domain-containing protein 2730 68.72 0 3012720..3013742 - 340 115352786 - Bamb_2735 - fatty acid desaturase 2731 72.16 +1 3013951..3015042 + 363 115352787 - Bamb_2736 - LacI family transcription regulator 2732 69.47 0 3015185..3016219 + 344 115352788 - Bamb_2737 - hypothetical protein 2733 67.99 0 3016255..3017085 + 276 115352789 - Bamb_2738 - xylose isomerase domain-containing protein 2734 62.12 -1 3017190..3017321 + 43 115352790 - Bamb_2739 - hypothetical protein 2735 69.60 0 3017366..3018352 + 328 115352791 - Bamb_2740 - inositol 2-dehydrogenase 2736 67.08 0 3018474..3019196 + 240 115352792 - Bamb_2741 - HAD family hydrolase 2737 69.62 0 3019287..3019997 - 236 115352793 - Bamb_2742 - 3,4-dihydroxy-2-butanone 4-phosphate synthase 2738 72.51 +1 3020475..3021158 - 227 115352794 - Bamb_2743 - XRE family transcriptional regulator 2739 71.17 0 3021359..3022534 - 391 115352795 - Bamb_2744 - major facilitator transporter 2740 70.74 0 3022682..3023614 + 310 115352796 - Bamb_2745 - LysR family transcriptional regulator 2741 65.21 0 3023892..3025265 + 457 115352797 - Bamb_2746 - tRNA-i(6)A37 thiotransferase enzyme MiaB 2742 69.34 0 3025299..3026345 + 348 115352798 - Bamb_2747 - PhoH family protein 2743 67.68 0 3026498..3027283 + 261 115352799 - Bamb_2748 - putative metalloprotease 2744 71.41 +1 3027298..3027930 + 210 115352800 - Bamb_2749 - ChaC family protein 2745 63.63 0 3028450..3029337 + 295 115352801 - Bamb_2750 - transporter-associated region 2746 70.46 0 3029390..3031078 + 562 115352802 lnt Bamb_2751 - apolipoprotein N-acyltransferase 2747 72.95 +1 3031095..3032732 - 545 115352803 - Bamb_2752 - TPR repeat-containing protein 2748 65.67 0 3033078..3034082 + 334 115352804 glyQ Bamb_2753 - glycyl-tRNA synthetase subunit alpha 2749 69.10 0 3034105..3036204 + 699 115352805 glyS Bamb_2754 - glycyl-tRNA synthetase subunit beta 2750 67.38 0 3036215..3036778 + 187 115352806 - Bamb_2755 - D,D-heptose 1,7-bisphosphate phosphatase 2751 64.71 0 3036822..3037586 + 254 115352807 - Bamb_2756 - phospholipid/glycerol acyltransferase 2752 68.86 0 3037633..3038544 + 303 115352808 - Bamb_2757 - hypothetical protein 2753 60.51 -1 3038653..3039042 - 129 115352809 - Bamb_2758 - lactoylglutathione lyase 2754 71.93 +1 3039431..3040342 + 303 115352810 - Bamb_2759 - hypothetical protein 2755 66.79 0 3040461..3041291 - 276 115352811 ksgA Bamb_2760 - dimethyladenosine transferase 2756 72.83 +1 3041347..3042336 - 329 115352812 pdxA Bamb_2761 - 4-hydroxythreonine-4-phosphate dehydrogenase 2757 68.21 0 3042348..3043706 - 452 115352813 - Bamb_2762 - PpiC-type peptidyl-prolyl cis-trans isomerase 2758 66.45 0 3043758..3046118 - 786 115352814 - Bamb_2763 - organic solvent tolerance protein 2759 69.52 0 3046344..3047393 + 349 115352815 - Bamb_2764 - aminoglycoside phosphotransferase 2760 71.39 +1 3047428..3048147 + 239 115352816 - Bamb_2765 - nucleotidyl transferase 2761 67.36 0 3048253..3050124 - 623 115352817 - Bamb_2766 - ABC transporter related 2762 65.94 0 3050286..3050696 + 136 115352818 - Bamb_2767 - thioesterase superfamily protein 2763 64.80 0 3050746..3051228 - 160 115352819 - Bamb_2768 - hypothetical protein 2764 70.91 0 3051349..3052173 + 274 115352820 - Bamb_2769 - formate dehydrogenase family accessory protein FdhD 2765 68.49 0 3052233..3053000 - 255 115352821 - Bamb_2770 - enoyl-CoA hydratase 2766 68.75 0 3053092..3054291 - 399 115352822 - Bamb_2771 - acetyl-CoA acetyltransferase 2767 66.79 0 3054367..3056802 - 811 115352823 - Bamb_2772 - 3-hydroxyacyl-CoA dehydrogenase, NAD-binding 2768 63.83 0 3058760..3059359 - 199 115352824 - Bamb_2773 - TetR family transcriptional regulator 2769 67.92 0 3059548..3060822 - 424 115352825 - Bamb_2774 - phospholipase D/transphosphatidylase 2770 66.08 0 3060819..3061331 - 170 115352826 ntpA Bamb_2775 - dATP pyrophosphohydrolase 2771 64.56 0 3061471..3063273 - 600 115352827 aspS Bamb_2776 - aspartyl-tRNA synthetase 2772 65.59 0 3063341..3063991 - 216 115352828 - Bamb_2777 - hypothetical protein 2773 71.43 +1 3064053..3064388 - 111 115352829 - Bamb_2778 - FmdB family regulatory protein 2774 70.81 0 3064485..3065111 - 208 115352830 - Bamb_2779 - thiopurine S-methyltransferase 2775 65.27 0 3065129..3066706 - 525 115352831 ubiB Bamb_2780 - putative ubiquinone biosynthesis protein UbiB 2776 69.86 0 3066719..3067345 - 208 115352832 - Bamb_2781 - hypothetical protein 2777 69.66 0 3067508..3068542 - 344 115352833 - Bamb_2782 - import inner membrane translocase, subunit Tim44 2778 58.33 -2 3068584..3069315 - 243 115352834 ubiE Bamb_2783 - ubiquinone/menaquinone biosynthesis methyltransferase 2779 66.91 0 3069368..3069781 - 137 115352835 - Bamb_2784 - hypothetical protein 2780 68.02 0 3069778..3070221 - 147 115352836 - Bamb_2785 - histidine triad (HIT) protein 2781 66.57 0 3070307..3074329 - 1340 115352837 - Bamb_2786 - FAD linked oxidase domain-containing protein 2782 66.80 0 3074905..3076428 + 507 115352838 - Bamb_2787 - threonine dehydratase 2783 65.58 0 3076441..3077265 + 274 115352839 queF Bamb_2788 - 7-cyano-7-deazaguanine reductase 2784 64.86 0 3077392..3077778 - 128 115352840 - Bamb_2789 - endoribonuclease L-PSP 2785 70.72 0 3077901..3079382 - 493 115352841 - Bamb_2790 - N-acyl-D-amino-acid deacylase 2786 69.54 0 3079385..3080359 - 324 115352842 - Bamb_2791 - RpiR family transcriptional regulator 2787 68.54 0 3080438..3081718 + 426 115352843 - Bamb_2792 - amino acid aldolase or racemase-like protein 2788 68.04 0 3081883..3082464 + 193 115352844 - Bamb_2793 - PfpI family intracellular peptidase 2789 66.24 0 3082586..3083059 - 157 115352845 - Bamb_2794 - MarR family transcriptional regulator 2790 67.73 0 3083068..3084663 - 531 115352846 - Bamb_2795 - major facilitator transporter 2791 68.09 0 3084771..3085613 + 280 115352847 - Bamb_2796 - hypothetical protein 2792 71.55 +1 3085583..3086545 - 320 115352848 - Bamb_2797 - alpha/beta hydrolase domain-containing protein 2793 70.57 0 3086648..3087082 - 144 115352849 - Bamb_2798 - CHRD domain-containing protein 2794 69.06 0 3087497..3088498 + 333 115352850 - Bamb_2799 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0