version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2627 71.01 0 2896502..2897422 + 306 115352683 - Bamb_2632 - LysR family transcriptional regulator 2628 71.97 +1 2897598..2898992 + 464 115352684 - Bamb_2633 - mannitol dehydrogenase domain-containing protein 2629 72.74 +1 2899123..2900604 + 493 115352685 - Bamb_2634 - xylulokinase 2630 69.99 0 2900651..2901673 + 340 115352686 - Bamb_2635 - DeoR family transcriptional regulator 2631 73.84 +1 2901687..2902913 - 408 115352687 - Bamb_2636 - major facilitator transporter 2632 73.43 +1 2902910..2904106 - 398 115352688 - Bamb_2637 - beta-lactamase 2633 68.93 0 2904220..2905104 + 294 115352689 - Bamb_2638 - LysR family transcriptional regulator 2634 67.93 0 2905118..2906227 - 369 115352690 - Bamb_2639 - ABC transporter related 2635 75.07 +1 2906302..2907015 - 237 115352691 - Bamb_2640 - HAD family hydrolase 2636 65.73 0 2907012..2907863 - 283 115352692 - Bamb_2641 - binding-protein-dependent transport systems inner membrane component 2637 66.46 0 2907860..2908807 - 315 115352693 - Bamb_2642 - binding-protein-dependent transport systems inner membrane component 2638 67.19 0 2908910..2910235 - 441 115352694 - Bamb_2643 - extracellular solute-binding protein 2639 72.70 +1 2910331..2911689 - 452 115352695 - Bamb_2644 - tagatose-6-phosphate kinase 2640 72.81 +1 2911677..2912636 - 319 115352696 - Bamb_2645 - ribokinase-like domain-containing protein 2641 70.01 0 2912706..2913482 - 258 115352697 - Bamb_2646 - sorbitol dehydrogenase 2642 69.70 0 2913812..2914273 + 153 115352698 - Bamb_2647 - ferric uptake regulator family protein 2643 68.09 0 2914323..2915237 + 304 115352699 - Bamb_2648 - periplasmic solute binding protein 2644 70.26 0 2915251..2916141 + 296 115352700 - Bamb_2649 - ABC transporter related 2645 69.99 0 2916134..2916916 + 260 115352701 - Bamb_2650 - ABC-3 protein 2646 69.26 0 2917024..2917872 - 282 115352702 - Bamb_2651 - carboxylesterase 2647 75.32 +1 2918114..2919580 - 488 115352703 - Bamb_2652 - carbohydrate kinase, FGGY 2648 65.65 0 2920030..2921406 + 458 115352704 - Bamb_2653 - uracil-xanthine permease 2649 68.96 0 2921653..2923176 - 507 115352705 - Bamb_2654 - RND efflux system outer membrane lipoprotein 2650 64.01 0 2923176..2926376 - 1066 115352706 - Bamb_2655 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2651 69.05 0 2926392..2927690 - 432 115352707 - Bamb_2656 - RND family efflux transporter MFP subunit 2652 64.64 0 2928089..2928730 + 213 115352708 - Bamb_2657 - TetR family transcriptional regulator 2653 69.57 0 2928853..2929506 - 217 115352709 - Bamb_2658 - isochorismatase hydrolase 2654 73.85 +1 2929659..2930660 + 333 115352710 - Bamb_2659 - AraC family transcriptional regulator 2655 71.75 +1 2930717..2931424 - 235 115352711 - Bamb_2660 - carbon monoxide dehydrogenase subunit G 2656 65.83 0 2931454..2931813 - 119 115352712 - Bamb_2661 - hypothetical protein 2657 68.23 0 2931950..2932396 - 148 115352713 - Bamb_2662 - hypothetical protein 2658 68.62 0 2932491..2933975 - 494 115352714 - Bamb_2663 - protease Do 2659 72.12 +1 2934094..2935431 - 445 115352715 - Bamb_2664 - periplasmic sensor signal transduction histidine kinase 2660 69.83 0 2935435..2936097 - 220 115352716 - Bamb_2665 - two component transcriptional regulator 2661 70.32 0 2936201..2937817 + 538 115352717 - Bamb_2666 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2662 65.14 0 2938064..2938978 + 304 115352718 - Bamb_2667 - sterol desaturase-like protein 2663 68.34 0 2939074..2940210 + 378 115352719 - Bamb_2668 - phospholipase/lecithinase/hemolysin-like protein 2664 73.08 +1 2940300..2941328 - 342 115352720 - Bamb_2669 - Sua5/YciO/YrdC/YwlC family protein 2665 71.93 +1 2941340..2942536 - 398 115352721 - Bamb_2670 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2666 69.73 0 2942625..2943146 - 173 115352722 - Bamb_2671 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 2667 66.55 0 2943213..2944103 - 296 115352723 - Bamb_2672 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2668 64.79 0 2944325..2945389 - 354 115352724 - Bamb_2673 - fructose-1,6-bisphosphate aldolase 2669 67.50 0 2945686..2947122 - 478 115352725 - Bamb_2674 - pyruvate kinase 2670 68.42 0 2947407..2948603 - 398 115352726 pgk Bamb_2675 - phosphoglycerate kinase 2671 69.14 0 2948884..2949207 - 107 115352727 - Bamb_2676 - branched-chain amino acid transport 2672 67.33 0 2949204..2949959 - 251 115352728 - Bamb_2677 - AzlC family protein 2673 64.72 0 2950167..2951090 + 307 115352729 - Bamb_2678 - branched-chain amino acid aminotransferase 2674 64.32 0 2951123..2951335 + 70 115352730 - Bamb_2679 - hypothetical protein 2675 67.78 0 2951520..2952509 + 329 115352731 - Bamb_2680 - lipopolysaccharide heptosyltransferase II 2676 65.10 0 2952625..2953071 + 148 115352732 - Bamb_2681 - hypothetical protein 2677 69.75 0 2953105..2954142 + 345 115352733 - Bamb_2682 - alpha/beta hydrolase fold 2678 71.84 +1 2954135..2954752 + 205 115352734 - Bamb_2683 - hypothetical protein 2679 72.45 +1 2954783..2956477 - 564 115352735 - Bamb_2684 - peptidase M48, Ste24p 2680 68.30 0 2956718..2957206 + 162 115352736 moaC Bamb_2685 - molybdenum cofactor biosynthesis protein C 2681 64.69 0 2957332..2960007 + 891 115352737 - Bamb_2686 - Rhs element Vgr protein 2682 57.79 -2 2960000..2960866 + 288 115352738 - Bamb_2687 - hypothetical protein 2683 62.05 -1 2960907..2962097 + 396 115352739 - Bamb_2688 - BNR repeat-containing glycosyl hydrolase 2684 61.70 -1 2962108..2963475 + 455 115352740 - Bamb_2689 - hypothetical protein 2685 70.22 0 2963506..2964714 + 402 115352741 - Bamb_2690 - hypothetical protein 2686 68.66 0 2964790..2965140 - 116 115352742 - Bamb_2691 - TonB family protein 2687 69.08 0 2965557..2967335 - 592 115352743 - Bamb_2692 - O-antigen polymerase 2688 71.69 +1 2967498..2968094 - 198 115352744 - Bamb_2693 - general secretion pathway protein H 2689 69.18 0 2968192..2968947 - 251 115352745 - Bamb_2694 - integral membrane protein TerC 2690 62.81 0 2969055..2969936 - 293 115352746 - Bamb_2695 - succinyl-CoA synthetase subunit alpha 2691 62.47 -1 2970006..2971172 - 388 115352747 sucC Bamb_2696 - succinyl-CoA synthetase subunit beta 2692 67.49 0 2971241..2971849 - 202 115352748 - Bamb_2697 - hypothetical protein 2693 68.93 0 2971995..2972876 - 293 115352749 recX Bamb_2698 - recombination regulator RecX 2694 63.52 0 2972876..2973955 - 359 115352750 recA Bamb_2699 - recombinase A 2695 66.31 0 2974022..2974870 + 282 115352751 - Bamb_2700 - two component transcriptional regulator 2696 71.69 +1 2974887..2976440 + 517 115352752 - Bamb_2701 - periplasmic sensor signal transduction histidine kinase 2697 65.04 0 2976681..2978339 + 552 115352753 - Bamb_2702 - major facilitator transporter 2698 66.46 0 2978643..2979614 - 323 115352754 - Bamb_2703 - LysR family transcriptional regulator 2699 72.34 +1 2979802..2980770 - 322 115352755 - Bamb_2704 - AraC family transcriptional regulator 2700 71.35 +1 2980885..2981568 + 227 115352756 - Bamb_2705 - ThiJ/PfpI domain-containing protein 2701 64.74 0 2981628..2981939 + 103 115352757 - Bamb_2706 - cupin 2 domain-containing protein 2702 66.32 0 2981983..2982267 - 94 115352758 - Bamb_2707 - hypothetical protein 2703 68.99 0 2982395..2983597 - 400 115352759 - Bamb_2708 - porin 2704 71.15 0 2983711..2985183 - 490 115352760 - Bamb_2709 - amidase 2705 69.17 0 2985216..2986532 - 438 115352761 - Bamb_2710 - major facilitator transporter 2706 67.86 0 2986754..2987674 + 306 115352762 - Bamb_2711 - LysR family transcriptional regulator 2707 63.29 0 2987964..2988851 + 295 115352763 - Bamb_2712 - LysR family transcriptional regulator 2708 59.62 -1 2988918..2989442 + 174 115352764 - Bamb_2713 - HMG-I and HMG-Y, DNA-binding domain-containing protein 2709 57.95 -2 2989442..2990278 + 278 115352765 - Bamb_2714 - integrase catalytic subunit 2710 68.53 0 2990545..2993652 + 1035 115352766 - Bamb_2715 - glycosyl transferase family protein 2711 63.22 0 2993687..2994034 - 115 115352767 - Bamb_2716 - glutathione-dependent formaldehyde-activating, GFA 2712 70.28 0 2994188..2994436 + 82 115352768 - Bamb_2717 - hypothetical protein 2713 69.43 0 2994464..2995222 - 252 115352769 - Bamb_2718 - GntR domain-containing protein 2714 66.75 0 2995302..2996450 + 382 115352770 - Bamb_2719 - mandelate racemase/muconate lactonizing protein 2715 72.35 +1 2996611..2997543 - 310 115352771 - Bamb_2720 - copper resistance D domain-containing protein 2716 68.99 0 2997999..2998688 + 229 115352772 - Bamb_2721 - cytochrome c, class I 2717 64.67 0 2998708..3000006 + 432 115352773 - Bamb_2722 - cytochrome c, class I 2718 68.61 0 3000136..3001578 + 480 115352774 - Bamb_2723 - DEAD/DEAH box helicase domain-containing protein 2719 70.20 0 3001572..3002081 - 169 115352775 - Bamb_2724 - hypothetical protein 2720 62.44 -1 3002148..3002975 - 275 115352776 - Bamb_2725 - hypothetical protein 2721 69.65 0 3003290..3004930 - 546 115352777 - Bamb_2726 - gamma-glutamyltransferase 2722 67.81 0 3005062..3005934 + 290 115352778 - Bamb_2727 - DeoR family transcriptional regulator 2723 57.58 -2 3006240..3006437 + 65 115352779 - Bamb_2728 - hypothetical protein 2724 69.65 0 3006527..3006895 - 122 115352780 - Bamb_2729 - hypothetical protein 2725 69.55 0 3007058..3008581 + 507 115352781 glpD Bamb_2730 - glycerol-3-phosphate dehydrogenase 2726 67.07 0 3008687..3010189 + 500 115352782 glpK Bamb_2731 - glycerol kinase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0