version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2586 60.45 -1 2854372..2854950 - 192 115352642 - Bamb_2591 - superoxide dismutase 2587 72.60 +1 2855193..2856575 - 460 115352643 xseA Bamb_2592 - exodeoxyribonuclease VII large subunit 2588 73.96 +1 2857026..2858054 + 342 115352644 - Bamb_2593 - tetraacyldisaccharide 4'-kinase 2589 67.65 0 2858035..2858238 + 67 115352645 - Bamb_2594 - hypothetical protein 2590 68.94 0 2858360..2859151 + 263 115352646 - Bamb_2595 - 3-deoxy-manno-octulosonate cytidylyltransferase 2591 64.56 0 2859359..2860021 + 220 115352647 adk Bamb_2596 - adenylate kinase 2592 70.49 0 2860199..2860957 + 252 115352648 - Bamb_2597 - short-chain dehydrogenase/reductase SDR 2593 66.90 0 2861040..2861882 - 280 115352649 - Bamb_2598 - hypothetical protein 2594 66.60 0 2861891..2863441 - 516 115352650 - Bamb_2599 - integral membrane protein MviN 2595 62.27 -1 2863746..2864018 + 90 115352651 rpsT Bamb_2600 - 30S ribosomal protein S20 2596 63.28 0 2864142..2865824 + 560 115352652 - Bamb_2601 - ornithine carbamoyltransferase 2597 70.67 0 2865944..2866993 - 349 115352653 - Bamb_2602 - UDP-N-acetylenolpyruvoylglucosamine reductase 2598 60.08 -1 2867130..2867615 + 161 115352654 - Bamb_2603 - nucleotide-binding protein 2599 69.01 0 2867700..2868338 - 212 115352655 - Bamb_2604 - putative glycerol-3-phosphate acyltransferase PlsY 2600 67.28 0 2868503..2868994 - 163 115352656 - Bamb_2605 - ybaK/ebsC protein 2601 72.68 +1 2869259..2870821 + 520 115352657 - Bamb_2606 - AMP-dependent synthetase and ligase 2602 69.56 0 2870877..2871845 - 322 115352658 xerD Bamb_2607 - site-specific tyrosine recombinase XerD 2603 68.15 0 2871842..2872312 - 156 115352659 - Bamb_2608 - methylated-DNA--protein-cysteine methyltransferase 2604 69.74 0 2872376..2873482 - 368 115352660 - Bamb_2609 - putative iron-sulfur cluster binding protein 2605 65.49 0 2873584..2874180 + 198 115352661 - Bamb_2610 - hypothetical protein 2606 68.84 0 2874174..2875691 + 505 115352662 - Bamb_2611 - N-acetylmuramoyl-L-alanine amidase 2607 69.25 0 2875743..2876711 - 322 115352663 - Bamb_2612 - hypothetical protein 2608 70.41 0 2876875..2877756 + 293 115352664 - Bamb_2613 - pirin domain-containing protein 2609 68.90 0 2877809..2878657 + 282 115352665 - Bamb_2614 - thioredoxin 2610 68.88 0 2878766..2879623 - 285 115352666 - Bamb_2615 - UBA/THIF-type NAD/FAD binding protein 2611 66.98 0 2879751..2880395 + 214 115352667 - Bamb_2616 - pyridoxamine 5'-phosphate oxidase 2612 63.31 0 2880523..2881743 + 406 115352668 - Bamb_2617 - cyclopropane-fatty-acyl-phospholipid synthase 2613 72.03 +1 2881767..2883089 + 440 115352669 - Bamb_2618 - hypothetical protein 2614 64.17 0 2883138..2883698 - 186 115352670 - Bamb_2619 - peptide methionine sulfoxide reductase 2615 68.95 0 2883717..2884286 + 189 115352671 - Bamb_2620 - hypothetical protein 2616 66.95 0 2884270..2885676 + 468 115352672 - Bamb_2621 - selenium-binding protein 2617 72.37 +1 2885673..2886338 + 221 115352673 - Bamb_2622 - hypothetical protein 2618 66.67 0 2886623..2887132 + 169 115352674 - Bamb_2623 - flavin reductase domain-containing protein 2619 63.67 0 2887119..2887619 - 166 115352675 - Bamb_2624 - AsnC family transcriptional regulator 2620 71.81 +1 2887750..2888391 + 213 115352676 - Bamb_2625 - cyclase family protein 2621 70.10 0 2888417..2889670 + 417 115352677 - Bamb_2626 - kynureninase 2622 66.99 0 2889736..2890677 + 313 115352678 - Bamb_2627 - tryptophan 2,3-dioxygenase 2623 71.53 +1 2890699..2892096 - 465 115352679 - Bamb_2628 - major facilitator transporter 2624 71.43 +1 2892356..2893300 - 314 115352680 - Bamb_2629 - 2-dehydropantoate 2-reductase 2625 72.11 +1 2893314..2894765 - 483 115352681 - Bamb_2630 - aldehyde dehydrogenase 2626 72.89 +1 2894795..2896402 - 535 115352682 - Bamb_2631 - benzoylformate decarboxylase 2627 71.01 0 2896502..2897422 + 306 115352683 - Bamb_2632 - LysR family transcriptional regulator 2628 71.97 +1 2897598..2898992 + 464 115352684 - Bamb_2633 - mannitol dehydrogenase domain-containing protein 2629 72.74 +1 2899123..2900604 + 493 115352685 - Bamb_2634 - xylulokinase 2630 69.99 0 2900651..2901673 + 340 115352686 - Bamb_2635 - DeoR family transcriptional regulator 2631 73.84 +1 2901687..2902913 - 408 115352687 - Bamb_2636 - major facilitator transporter 2632 73.43 +1 2902910..2904106 - 398 115352688 - Bamb_2637 - beta-lactamase 2633 68.93 0 2904220..2905104 + 294 115352689 - Bamb_2638 - LysR family transcriptional regulator 2634 67.93 0 2905118..2906227 - 369 115352690 - Bamb_2639 - ABC transporter related 2635 75.07 +1 2906302..2907015 - 237 115352691 - Bamb_2640 - HAD family hydrolase 2636 65.73 0 2907012..2907863 - 283 115352692 - Bamb_2641 - binding-protein-dependent transport systems inner membrane component 2637 66.46 0 2907860..2908807 - 315 115352693 - Bamb_2642 - binding-protein-dependent transport systems inner membrane component 2638 67.19 0 2908910..2910235 - 441 115352694 - Bamb_2643 - extracellular solute-binding protein 2639 72.70 +1 2910331..2911689 - 452 115352695 - Bamb_2644 - tagatose-6-phosphate kinase 2640 72.81 +1 2911677..2912636 - 319 115352696 - Bamb_2645 - ribokinase-like domain-containing protein 2641 70.01 0 2912706..2913482 - 258 115352697 - Bamb_2646 - sorbitol dehydrogenase 2642 69.70 0 2913812..2914273 + 153 115352698 - Bamb_2647 - ferric uptake regulator family protein 2643 68.09 0 2914323..2915237 + 304 115352699 - Bamb_2648 - periplasmic solute binding protein 2644 70.26 0 2915251..2916141 + 296 115352700 - Bamb_2649 - ABC transporter related 2645 69.99 0 2916134..2916916 + 260 115352701 - Bamb_2650 - ABC-3 protein 2646 69.26 0 2917024..2917872 - 282 115352702 - Bamb_2651 - carboxylesterase 2647 75.32 +1 2918114..2919580 - 488 115352703 - Bamb_2652 - carbohydrate kinase, FGGY 2648 65.65 0 2920030..2921406 + 458 115352704 - Bamb_2653 - uracil-xanthine permease 2649 68.96 0 2921653..2923176 - 507 115352705 - Bamb_2654 - RND efflux system outer membrane lipoprotein 2650 64.01 0 2923176..2926376 - 1066 115352706 - Bamb_2655 - hydrophobe/amphiphile efflux-1 (HAE1) family protein 2651 69.05 0 2926392..2927690 - 432 115352707 - Bamb_2656 - RND family efflux transporter MFP subunit 2652 64.64 0 2928089..2928730 + 213 115352708 - Bamb_2657 - TetR family transcriptional regulator 2653 69.57 0 2928853..2929506 - 217 115352709 - Bamb_2658 - isochorismatase hydrolase 2654 73.85 +1 2929659..2930660 + 333 115352710 - Bamb_2659 - AraC family transcriptional regulator 2655 71.75 +1 2930717..2931424 - 235 115352711 - Bamb_2660 - carbon monoxide dehydrogenase subunit G 2656 65.83 0 2931454..2931813 - 119 115352712 - Bamb_2661 - hypothetical protein 2657 68.23 0 2931950..2932396 - 148 115352713 - Bamb_2662 - hypothetical protein 2658 68.62 0 2932491..2933975 - 494 115352714 - Bamb_2663 - protease Do 2659 72.12 +1 2934094..2935431 - 445 115352715 - Bamb_2664 - periplasmic sensor signal transduction histidine kinase 2660 69.83 0 2935435..2936097 - 220 115352716 - Bamb_2665 - two component transcriptional regulator 2661 70.32 0 2936201..2937817 + 538 115352717 - Bamb_2666 - D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 2662 65.14 0 2938064..2938978 + 304 115352718 - Bamb_2667 - sterol desaturase-like protein 2663 68.34 0 2939074..2940210 + 378 115352719 - Bamb_2668 - phospholipase/lecithinase/hemolysin-like protein 2664 73.08 +1 2940300..2941328 - 342 115352720 - Bamb_2669 - Sua5/YciO/YrdC/YwlC family protein 2665 71.93 +1 2941340..2942536 - 398 115352721 - Bamb_2670 - phosphoribosylaminoimidazole carboxylase ATPase subunit 2666 69.73 0 2942625..2943146 - 173 115352722 - Bamb_2671 - phosphoribosylaminoimidazole carboxylase, catalytic subunit 2667 66.55 0 2943213..2944103 - 296 115352723 - Bamb_2672 - phosphoribosylaminoimidazole-succinocarboxamide synthase 2668 64.79 0 2944325..2945389 - 354 115352724 - Bamb_2673 - fructose-1,6-bisphosphate aldolase 2669 67.50 0 2945686..2947122 - 478 115352725 - Bamb_2674 - pyruvate kinase 2670 68.42 0 2947407..2948603 - 398 115352726 pgk Bamb_2675 - phosphoglycerate kinase 2671 69.14 0 2948884..2949207 - 107 115352727 - Bamb_2676 - branched-chain amino acid transport 2672 67.33 0 2949204..2949959 - 251 115352728 - Bamb_2677 - AzlC family protein 2673 64.72 0 2950167..2951090 + 307 115352729 - Bamb_2678 - branched-chain amino acid aminotransferase 2674 64.32 0 2951123..2951335 + 70 115352730 - Bamb_2679 - hypothetical protein 2675 67.78 0 2951520..2952509 + 329 115352731 - Bamb_2680 - lipopolysaccharide heptosyltransferase II 2676 65.10 0 2952625..2953071 + 148 115352732 - Bamb_2681 - hypothetical protein 2677 69.75 0 2953105..2954142 + 345 115352733 - Bamb_2682 - alpha/beta hydrolase fold 2678 71.84 +1 2954135..2954752 + 205 115352734 - Bamb_2683 - hypothetical protein 2679 72.45 +1 2954783..2956477 - 564 115352735 - Bamb_2684 - peptidase M48, Ste24p 2680 68.30 0 2956718..2957206 + 162 115352736 moaC Bamb_2685 - molybdenum cofactor biosynthesis protein C 2681 64.69 0 2957332..2960007 + 891 115352737 - Bamb_2686 - Rhs element Vgr protein 2682 57.79 -2 2960000..2960866 + 288 115352738 - Bamb_2687 - hypothetical protein 2683 62.05 -1 2960907..2962097 + 396 115352739 - Bamb_2688 - BNR repeat-containing glycosyl hydrolase 2684 61.70 -1 2962108..2963475 + 455 115352740 - Bamb_2689 - hypothetical protein 2685 70.22 0 2963506..2964714 + 402 115352741 - Bamb_2690 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0