version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 211 69.90 0 247296..247976 - 226 115350267 - Bamb_0212 - hypothetical protein 212 71.26 +1 248056..249144 + 362 115350268 - Bamb_0213 - arginase/agmatinase/formiminoglutamase 213 59.97 -1 249373..250104 + 243 115350269 - Bamb_0214 - hypothetical protein 214 59.56 -1 250166..250531 + 121 115350270 - Bamb_0215 - hypothetical protein 215 71.03 0 250641..252038 - 465 115350271 - Bamb_0216 - glucarate dehydratase 216 66.67 0 252111..253451 - 446 115350272 - Bamb_0217 - d-galactonate transporter 217 73.30 +1 253751..254383 + 210 115350273 - Bamb_0218 - hypothetical protein 218 70.70 0 254380..255717 + 445 115350274 - Bamb_0219 - carotenoid oxygenase 219 67.69 0 255731..256897 - 388 115350275 - Bamb_0220 - hypothetical protein 220 68.48 0 256906..258060 - 384 115350276 - Bamb_0221 - hypothetical protein 221 67.95 0 258079..258777 - 232 115350277 - Bamb_0222 - ABC transporter related 222 71.31 +1 258788..259993 - 401 115350278 - Bamb_0223 - RND family efflux transporter MFP subunit 223 61.81 -1 260294..260602 + 102 115350279 - Bamb_0224 - hypothetical protein 224 74.35 +1 260677..261483 - 268 115350280 - Bamb_0225 - hypothetical protein 225 72.07 +1 261581..262450 + 289 115350281 - Bamb_0226 - 6-phosphogluconate dehydrogenase, NAD-binding 226 68.08 0 262522..263157 + 211 115350282 - Bamb_0227 - lysine exporter protein LysE/YggA 227 76.37 +2 263229..264506 - 425 115350283 - Bamb_0228 - major facilitator transporter 228 73.40 +1 264604..265524 + 306 115350284 - Bamb_0229 - LysR family transcriptional regulator 229 67.03 0 265738..266571 - 277 115350285 - Bamb_0230 - OmpW family protein 230 67.15 0 266588..267829 - 413 115350286 - Bamb_0231 - hypothetical protein 231 67.85 0 267984..269417 - 477 115350287 - Bamb_0232 - hypothetical protein 232 66.77 0 269847..270797 - 316 115350288 - Bamb_0233 - N-acetyl-gamma-glutamyl-phosphate reductase 233 68.24 0 270998..271570 - 190 115350289 - Bamb_0234 - flavodoxin/nitric oxide synthase 234 72.31 +1 271786..272388 - 200 115350290 - Bamb_0235 - YbhB and YbcL 235 62.88 0 272629..273315 - 228 115350291 pyrE Bamb_0236 - orotate phosphoribosyltransferase 236 65.96 0 273776..276046 + 756 115350292 - Bamb_0237 - malic enzyme 237 67.98 0 276182..279772 - 1196 115350293 - Bamb_0238 - indolepyruvate ferredoxin oxidoreductase 238 70.50 0 280027..280287 + 86 115350294 - Bamb_0239 - hypothetical protein 239 63.30 0 280402..281499 - 365 115350295 - Bamb_0240 - 4-hydroxyphenylpyruvate dioxygenase 240 66.67 0 281713..282237 + 174 115350296 - Bamb_0241 - AsnC family transcriptional regulator 241 65.12 0 282305..282952 - 215 115350297 - Bamb_0242 - GCN5-related N-acetyltransferase 242 64.52 0 283188..283793 - 201 115350298 - Bamb_0243 - TetR family transcriptional regulator 243 71.32 +1 283816..284631 - 271 115350299 - Bamb_0244 - hypothetical protein 244 65.66 0 284762..285850 - 362 115350300 - Bamb_0245 - phenylacetate-CoA oxygenase/reductase, PaaK subunit 245 70.74 0 285853..286416 - 187 115350301 - Bamb_0246 - phenylacetate-CoA oxygenase, PaaJ subunit 246 68.16 0 286442..287245 - 267 115350302 - Bamb_0247 - phenylacetate-CoA oxygenase, PaaI subunit 247 64.91 0 287256..287540 - 94 115350303 - Bamb_0248 - phenylacetate-CoA oxygenase subunit PaaB 248 66.77 0 287577..288575 - 332 115350304 - Bamb_0249 - phenylacetate-CoA oxygenase subunit PaaA 249 70.22 0 288772..290037 + 421 115350305 - Bamb_0250 - GDSL family lipase 250 70.44 0 296763..297239 + 158 115350306 - Bamb_0251 - hypothetical protein 251 61.63 -1 298436..299626 + 396 115350307 - Bamb_0252 - elongation factor Tu 252 57.48 -2 299805..300185 + 126 115350308 secE Bamb_0253 - preprotein translocase subunit SecE 253 58.60 -1 300187..300744 + 185 115350309 nusG Bamb_0254 - transcription antitermination protein NusG 254 60.65 -1 300885..301316 + 143 115350310 rplK Bamb_0255 - 50S ribosomal protein L11 255 62.37 -1 301317..302015 + 232 115350311 rplA Bamb_0256 - 50S ribosomal protein L1 256 58.73 -1 302254..302820 + 188 115350312 rplJ Bamb_0257 - 50S ribosomal protein L10 257 58.67 -1 302884..303258 + 124 115350313 rplL Bamb_0258 - 50S ribosomal protein L7/L12 258 61.75 -1 303636..307742 + 1368 115350314 rpoB Bamb_0259 - DNA-directed RNA polymerase subunit beta 259 62.78 0 307764..312005 + 1413 115350315 - Bamb_0260 - DNA-directed RNA polymerase subunit beta' 260 67.86 0 312249..314096 + 615 115350316 - Bamb_0261 - ATP-dependent DNA helicase RecQ 261 61.42 -1 314325..314705 + 126 115350317 rpsL Bamb_0262 - 30S ribosomal protein S12 262 60.30 -1 314878..315348 + 156 115350318 - Bamb_0263 - 30S ribosomal protein S7 263 60.25 -1 315472..317574 + 700 115350319 - Bamb_0264 - elongation factor G 264 61.54 -1 317614..318804 + 396 115350320 - Bamb_0265 - elongation factor Tu 265 58.97 -1 319089..319400 + 103 115350321 rpsJ Bamb_0266 - 30S ribosomal protein S10 266 61.62 -1 319575..320228 + 217 115350322 rplC Bamb_0267 - 50S ribosomal protein L3 267 59.58 -1 320228..320848 + 206 115350323 rplD Bamb_0268 - 50S ribosomal protein L4 268 55.56 -2 320845..321159 + 104 115350324 rplW Bamb_0269 - 50S ribosomal protein L23 269 63.77 0 321162..321989 + 275 115350325 rplB Bamb_0270 - 50S ribosomal protein L2 270 55.43 -2 322000..322275 + 91 115350326 rpsS Bamb_0271 - 30S ribosomal protein S19 271 57.88 -2 322288..322617 + 109 115350327 rplV Bamb_0272 - 50S ribosomal protein L22 272 61.17 -1 322629..323429 + 266 115350328 rpsC Bamb_0273 - 30S ribosomal protein S3 273 58.99 -1 323432..323848 + 138 115350329 rplP Bamb_0274 - 50S ribosomal protein L16 274 58.97 -1 323858..324052 + 64 115350330 - Bamb_0275 - 50S ribosomal protein L29 275 57.88 -2 324049..324321 + 90 115350331 rpsQ Bamb_0276 - 30S ribosomal protein S17 276 58.81 -1 324632..325000 + 122 115350332 rplN Bamb_0277 - 50S ribosomal protein L14 277 56.63 -2 325010..325318 + 102 115350333 rplX Bamb_0278 - 50S ribosomal protein L24 278 57.04 -2 325335..325874 + 179 115350334 rplE Bamb_0279 - 50S ribosomal protein L5 279 60.78 -1 325882..326187 + 101 115350335 rpsN Bamb_0280 - 30S ribosomal protein S14 280 60.35 -1 326202..326597 + 131 115350336 rpsH Bamb_0281 - 30S ribosomal protein S8 281 59.70 -1 326616..327146 + 176 115350337 rplF Bamb_0282 - 50S ribosomal protein L6 282 63.39 0 327159..327524 + 121 115350338 rplR Bamb_0283 - 50S ribosomal protein L18 283 62.62 -1 327539..328057 + 172 115350339 rpsE Bamb_0284 - 30S ribosomal protein S5 284 60.11 -1 328073..328255 + 60 115350340 rpmD Bamb_0285 - 50S ribosomal protein L30 285 63.45 0 328282..328716 + 144 115350341 rplO Bamb_0286 - 50S ribosomal protein L15 286 59.11 -1 328759..330108 + 449 115350342 secY Bamb_0287 - preprotein translocase subunit SecY 287 55.25 -2 330118..330336 + 72 115350343 infA Bamb_0288 - translation initiation factor IF-1 288 55.56 -2 330357..330473 + 38 115350344 rpmJ Bamb_0289 - 50S ribosomal protein L36 289 60.38 -1 330512..330877 + 121 115350345 rpsM Bamb_0290 - 30S ribosomal protein S13 290 62.19 -1 330906..331307 + 133 115350346 - Bamb_0291 - 30S ribosomal protein S11 291 61.06 -1 331446..332087 + 213 115350347 rpsD Bamb_0292 - 30S ribosomal protein S4 292 61.04 -1 332212..333189 + 325 115350348 - Bamb_0293 - DNA-directed RNA polymerase subunit alpha 293 60.86 -1 333326..333721 + 131 115350349 rplQ Bamb_0294 - 50S ribosomal protein L17 294 63.30 0 333922..334248 + 108 115350350 - Bamb_0295 - CutA1 divalent ion tolerance protein 295 67.37 0 334241..336076 + 611 115350351 - Bamb_0296 - protein-disulfide reductase 296 65.47 0 336186..337184 - 332 115350352 - Bamb_0297 - delta-aminolevulinic acid dehydratase 297 63.33 0 337438..338097 - 219 115350353 - Bamb_0298 - GTPase EngB 298 65.14 0 338315..338968 + 217 115350354 - Bamb_0299 - cytochrome c, class I 299 65.36 0 339170..341392 + 740 115350355 - Bamb_0300 - ResB family protein 300 64.15 0 341397..342587 + 396 115350356 - Bamb_0301 - cytochrome c assembly protein 301 64.35 0 342707..343741 + 344 115350357 - Bamb_0302 - putative sulfite oxidase subunit YedY 302 66.38 0 343750..344451 + 233 115350358 - Bamb_0303 - putative sulfite oxidase subunit YedZ 303 67.38 0 344537..344815 - 92 115350359 - Bamb_0304 - putative lipoprotein 304 63.30 0 344855..345181 + 108 115350360 cyaY Bamb_0305 - frataxin-like protein 305 66.58 0 345277..347670 - 797 115350361 - Bamb_0306 - 1A family penicillin-binding protein 306 75.43 +1 347891..348814 + 307 115350362 - Bamb_0307 - hypothetical protein 307 72.86 +1 348814..349443 + 209 115350363 - Bamb_0308 - hypothetical protein 308 72.28 +1 349440..350312 + 290 115350364 - Bamb_0309 - hypothetical protein 309 70.88 0 350309..351970 + 553 115350365 - Bamb_0310 - type IV pilus secretin PilQ 310 64.14 0 352011..352565 + 184 115350366 aroK Bamb_0311 - shikimate kinase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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