version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2525 71.94 +1 2787819..2788709 - 296 115352581 - Bamb_2530 - alpha/beta hydrolase fold 2526 73.27 +1 2788814..2789707 + 297 115352582 - Bamb_2531 - LysR family transcriptional regulator 2527 69.57 0 2789790..2790719 - 309 115352583 - Bamb_2532 - LysR family transcriptional regulator 2528 66.54 0 2790895..2791668 - 257 115352584 - Bamb_2533 - short chain dehydrogenase 2529 70.43 0 2791983..2792699 + 238 115352585 - Bamb_2534 - pseudouridine synthase, Rsu 2530 57.67 -2 2792808..2792996 + 62 115352586 - Bamb_2535 - hypothetical protein 2531 73.22 +1 2792979..2794016 - 345 115352587 - Bamb_2536 - NAD-dependent epimerase/dehydratase 2532 67.34 0 2794123..2795154 + 343 115352588 - Bamb_2537 - CDP-6-deoxy-delta-3,4-glucoseen reductase 2533 65.38 0 2795236..2796633 + 465 115352589 argD Bamb_2538 - bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein 2534 69.44 0 2796647..2797114 + 155 115352590 - Bamb_2539 - putative acetyltransferase 2535 65.62 0 2797136..2797807 - 223 115352591 - Bamb_2540 - hypothetical protein 2536 63.18 0 2798042..2798758 - 238 115352592 - Bamb_2541 - ABC transporter related 2537 64.35 0 2798758..2799534 - 258 115352593 - Bamb_2542 - ABC transporter related 2538 64.19 0 2799559..2800728 - 389 115352594 - Bamb_2543 - inner-membrane translocator 2539 64.88 0 2800748..2801698 - 316 115352595 - Bamb_2544 - inner-membrane translocator 2540 67.75 0 2801910..2802740 - 276 115352596 - Bamb_2545 - hypothetical protein 2541 66.87 0 2803012..2803992 - 326 115352597 ispH Bamb_2546 - 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2542 62.94 0 2803995..2804450 - 151 115352598 - Bamb_2547 - peptidylprolyl isomerase, FKBP-type 2543 72.33 +1 2804586..2805362 + 258 115352599 - Bamb_2548 - DNA repair protein RadC 2544 61.97 -1 2805600..2805833 + 77 115352600 rpmB Bamb_2549 - 50S ribosomal protein L28 2545 51.19 -2 2805851..2806018 + 55 115352601 rpmG Bamb_2550 - 50S ribosomal protein L33 2546 67.93 0 2806179..2807765 + 528 115352602 - Bamb_2551 - L-aspartate oxidase 2547 68.59 0 2807860..2808741 - 293 115352603 - Bamb_2552 - nicotinate-nucleotide pyrophosphorylase 2548 66.14 0 2808873..2810009 - 378 115352604 - Bamb_2553 - quinolinate synthetase 2549 62.32 -1 2810298..2811494 - 398 115352605 - Bamb_2554 - fatty acid desaturase 2550 69.05 0 2811729..2813111 - 460 115352606 - Bamb_2555 - MscS mechanosensitive ion channel 2551 70.55 0 2813130..2814392 - 420 115352607 - Bamb_2556 - Fmu (Sun) domain-containing protein 2552 69.23 0 2814389..2815051 - 220 115352608 purN Bamb_2557 - phosphoribosylglycinamide formyltransferase 2553 70.71 0 2815130..2816167 + 345 115352609 - Bamb_2558 - bifunctional riboflavin kinase/FMN adenylyltransferase 2554 65.75 0 2816270..2819107 + 945 115352610 ileS Bamb_2559 - isoleucyl-tRNA synthetase 2555 66.07 0 2819110..2819610 + 166 115352611 - Bamb_2560 - lipoprotein signal peptidase 2556 69.22 0 2819678..2820889 + 403 115352612 - Bamb_2561 - bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 2557 66.89 0 2820945..2821391 + 148 115352613 dut Bamb_2562 - deoxyuridine 5'-triphosphate nucleotidohydrolase 2558 59.62 -1 2821472..2821996 + 174 115352614 - Bamb_2563 - HMG-I and HMG-Y, DNA-binding domain-containing protein 2559 57.95 -2 2821996..2822832 + 278 115352615 - Bamb_2564 - integrase catalytic subunit 2560 67.17 0 2822993..2824372 - 459 115352616 - Bamb_2565 - amino acid permease-associated region 2561 63.84 0 2824475..2826775 - 766 115352617 - Bamb_2566 - ATP-dependent Clp protease, ATP-binding subunit clpA 2562 58.41 -1 2826772..2827086 - 104 115352618 clpS Bamb_2567 - ATP-dependent Clp protease adaptor protein ClpS 2563 56.86 -2 2827635..2827838 + 67 115352619 - Bamb_2568 - cold-shock DNA-binding domain-containing protein 2564 69.99 0 2828015..2829610 - 531 115352620 - Bamb_2569 - multicopper oxidase, type 3 2565 63.56 0 2830274..2830498 + 74 115352621 - Bamb_2570 - hypothetical protein 2566 65.95 0 2830616..2832844 - 742 115352622 - Bamb_2571 - isocitrate dehydrogenase, NADP-dependent 2567 62.45 -1 2833127..2834383 - 418 115352623 - Bamb_2572 - isocitrate dehydrogenase 2568 71.33 +1 2834658..2835236 + 192 115352624 - Bamb_2573 - pseudouridine synthase, Rsu 2569 60.56 -1 2835527..2835739 + 70 115352625 - Bamb_2574 - hypothetical protein 2570 67.07 0 2835899..2836399 + 166 115352626 - Bamb_2575 - hypothetical protein 2571 64.54 0 2836615..2838726 + 703 115352627 - Bamb_2576 - elongation factor G 2572 68.39 0 2838866..2839909 + 347 115352628 - Bamb_2577 - high-affinity nickel-transporter 2573 74.15 +1 2840196..2841785 + 529 115352629 - Bamb_2578 - hypothetical protein 2574 68.44 0 2841811..2842656 - 281 115352630 - Bamb_2579 - aldo/keto reductase 2575 66.67 0 2842793..2843569 + 258 115352631 - Bamb_2580 - GntR family transcriptional regulator 2576 72.77 +1 2843591..2844982 - 463 115352632 - Bamb_2581 - L-carnitine dehydratase/bile acid-inducible protein F 2577 75.26 +1 2845122..2846354 + 410 115352633 - Bamb_2582 - citrate synthase 2578 74.69 +1 2846327..2846650 - 107 115352634 - Bamb_2583 - hypothetical protein 2579 67.41 0 2846915..2848384 + 489 115352635 - Bamb_2584 - EmrB/QacA family drug resistance transporter 2580 70.43 0 2848574..2849848 + 424 115352636 - Bamb_2585 - diguanylate phosphodiesterase 2581 71.06 0 2849864..2850478 - 204 115352637 - Bamb_2586 - methyltransferase type 11 2582 73.48 +1 2850571..2851626 - 351 115352638 - Bamb_2587 - 2-dehydropantoate 2-reductase 2583 69.71 0 2851619..2852143 - 174 115352639 - Bamb_2588 - hypothetical protein 2584 71.33 +1 2852225..2852932 + 235 115352640 - Bamb_2589 - Crp/FNR family transcriptional regulator 2585 71.99 +1 2852984..2854261 + 425 115352641 - Bamb_2590 - chromate transporter 2586 60.45 -1 2854372..2854950 - 192 115352642 - Bamb_2591 - superoxide dismutase 2587 72.60 +1 2855193..2856575 - 460 115352643 xseA Bamb_2592 - exodeoxyribonuclease VII large subunit 2588 73.96 +1 2857026..2858054 + 342 115352644 - Bamb_2593 - tetraacyldisaccharide 4'-kinase 2589 67.65 0 2858035..2858238 + 67 115352645 - Bamb_2594 - hypothetical protein 2590 68.94 0 2858360..2859151 + 263 115352646 - Bamb_2595 - 3-deoxy-manno-octulosonate cytidylyltransferase 2591 64.56 0 2859359..2860021 + 220 115352647 adk Bamb_2596 - adenylate kinase 2592 70.49 0 2860199..2860957 + 252 115352648 - Bamb_2597 - short-chain dehydrogenase/reductase SDR 2593 66.90 0 2861040..2861882 - 280 115352649 - Bamb_2598 - hypothetical protein 2594 66.60 0 2861891..2863441 - 516 115352650 - Bamb_2599 - integral membrane protein MviN 2595 62.27 -1 2863746..2864018 + 90 115352651 rpsT Bamb_2600 - 30S ribosomal protein S20 2596 63.28 0 2864142..2865824 + 560 115352652 - Bamb_2601 - ornithine carbamoyltransferase 2597 70.67 0 2865944..2866993 - 349 115352653 - Bamb_2602 - UDP-N-acetylenolpyruvoylglucosamine reductase 2598 60.08 -1 2867130..2867615 + 161 115352654 - Bamb_2603 - nucleotide-binding protein 2599 69.01 0 2867700..2868338 - 212 115352655 - Bamb_2604 - putative glycerol-3-phosphate acyltransferase PlsY 2600 67.28 0 2868503..2868994 - 163 115352656 - Bamb_2605 - ybaK/ebsC protein 2601 72.68 +1 2869259..2870821 + 520 115352657 - Bamb_2606 - AMP-dependent synthetase and ligase 2602 69.56 0 2870877..2871845 - 322 115352658 xerD Bamb_2607 - site-specific tyrosine recombinase XerD 2603 68.15 0 2871842..2872312 - 156 115352659 - Bamb_2608 - methylated-DNA--protein-cysteine methyltransferase 2604 69.74 0 2872376..2873482 - 368 115352660 - Bamb_2609 - putative iron-sulfur cluster binding protein 2605 65.49 0 2873584..2874180 + 198 115352661 - Bamb_2610 - hypothetical protein 2606 68.84 0 2874174..2875691 + 505 115352662 - Bamb_2611 - N-acetylmuramoyl-L-alanine amidase 2607 69.25 0 2875743..2876711 - 322 115352663 - Bamb_2612 - hypothetical protein 2608 70.41 0 2876875..2877756 + 293 115352664 - Bamb_2613 - pirin domain-containing protein 2609 68.90 0 2877809..2878657 + 282 115352665 - Bamb_2614 - thioredoxin 2610 68.88 0 2878766..2879623 - 285 115352666 - Bamb_2615 - UBA/THIF-type NAD/FAD binding protein 2611 66.98 0 2879751..2880395 + 214 115352667 - Bamb_2616 - pyridoxamine 5'-phosphate oxidase 2612 63.31 0 2880523..2881743 + 406 115352668 - Bamb_2617 - cyclopropane-fatty-acyl-phospholipid synthase 2613 72.03 +1 2881767..2883089 + 440 115352669 - Bamb_2618 - hypothetical protein 2614 64.17 0 2883138..2883698 - 186 115352670 - Bamb_2619 - peptide methionine sulfoxide reductase 2615 68.95 0 2883717..2884286 + 189 115352671 - Bamb_2620 - hypothetical protein 2616 66.95 0 2884270..2885676 + 468 115352672 - Bamb_2621 - selenium-binding protein 2617 72.37 +1 2885673..2886338 + 221 115352673 - Bamb_2622 - hypothetical protein 2618 66.67 0 2886623..2887132 + 169 115352674 - Bamb_2623 - flavin reductase domain-containing protein 2619 63.67 0 2887119..2887619 - 166 115352675 - Bamb_2624 - AsnC family transcriptional regulator 2620 71.81 +1 2887750..2888391 + 213 115352676 - Bamb_2625 - cyclase family protein 2621 70.10 0 2888417..2889670 + 417 115352677 - Bamb_2626 - kynureninase 2622 66.99 0 2889736..2890677 + 313 115352678 - Bamb_2627 - tryptophan 2,3-dioxygenase 2623 71.53 +1 2890699..2892096 - 465 115352679 - Bamb_2628 - major facilitator transporter 2624 71.43 +1 2892356..2893300 - 314 115352680 - Bamb_2629 - 2-dehydropantoate 2-reductase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0