version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2220 60.96 -1 2453672..2456179 + 835 115352276 - Bamb_2225 - Rhs element Vgr protein 2221 55.15 -2 2456231..2459200 + 989 115352277 - Bamb_2226 - EF hand domain-containing protein 2222 61.51 -1 2460281..2460532 + 83 115352278 - Bamb_2227 - PAAR repeat-containing protein 2223 66.72 0 2460679..2462694 - 671 115352279 - Bamb_2228 - Na+/solute symporter 2224 69.28 0 2462698..2463042 - 114 115352280 - Bamb_2229 - membrane protein-like protein 2225 67.17 0 2463128..2465110 - 660 115352281 - Bamb_2230 - acetyl-CoA synthetase 2226 68.21 0 2465433..2466341 + 302 115352282 - Bamb_2231 - hypothetical protein 2227 62.71 0 2466456..2467061 + 201 115352283 - Bamb_2232 - hypothetical protein 2228 65.88 0 2467096..2468619 + 507 115352284 - Bamb_2233 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 2229 56.18 -2 2468813..2469289 + 158 115352285 - Bamb_2234 - bacterioferritin 2230 70.49 0 2469336..2470199 + 287 115352286 - Bamb_2235 - glutamate racemase 2231 65.40 0 2470349..2470585 + 78 115352287 - Bamb_2236 - BFD/(2Fe-2S)-binding domain-containing protein 2232 68.99 0 2470803..2471534 + 243 115352288 - Bamb_2237 - TonB family protein 2233 65.98 0 2471569..2472300 + 243 115352289 - Bamb_2238 - MotA/TolQ/ExbB proton channel 2234 63.12 0 2472320..2472742 + 140 115352290 - Bamb_2239 - biopolymer transport protein ExbD/TolR 2235 66.77 0 2473108..2474085 - 325 115352291 - Bamb_2240 - LysR family transcriptional regulator 2236 68.96 0 2474208..2475080 + 290 115352292 - Bamb_2241 - pirin domain-containing protein 2237 62.76 0 2475180..2475665 + 161 115352293 - Bamb_2242 - hypothetical protein 2238 65.04 0 2475804..2476049 + 81 115352294 - Bamb_2243 - hypothetical protein 2239 67.45 0 2476368..2477765 - 465 115352295 - Bamb_2244 - polyferredoxin-like protein 2240 65.60 0 2477762..2478604 - 280 115352296 - Bamb_2245 - iron permease FTR1 2241 64.26 0 2478663..2478995 - 110 115352297 - Bamb_2246 - hypothetical protein 2242 63.41 0 2479051..2479602 - 183 115352298 - Bamb_2247 - hypothetical protein 2243 64.85 0 2479822..2481912 - 696 115352299 - Bamb_2248 - excinuclease ABC subunit B 2244 66.08 0 2482161..2483360 + 399 115352300 - Bamb_2249 - aromatic amino acid aminotransferase 2245 64.51 0 2483510..2484298 - 262 115352301 - Bamb_2250 - 3-hydroxybutyrate dehydrogenase 2246 65.43 0 2484463..2485434 + 323 115352302 - Bamb_2251 - aldo/keto reductase 2247 61.70 -1 2485545..2486390 + 281 115352303 - Bamb_2252 - hypothetical protein 2248 66.37 0 2486406..2486741 - 111 115352304 - Bamb_2253 - hypothetical protein 2249 57.82 -2 2486889..2487035 - 48 115352305 - Bamb_2254 - hypothetical protein 2250 62.22 -1 2487250..2487654 - 134 115352306 - Bamb_2255 - MerR family transcriptional regulator 2251 65.51 0 2493561..2494859 + 432 115352307 - Bamb_2256 - hypothetical protein 2252 67.15 0 2495076..2495906 + 276 115352308 - Bamb_2257 - two component LuxR family transcriptional regulator 2253 67.70 0 2495982..2496656 + 224 115352309 - Bamb_2258 - membrane protein-like protein 2254 62.30 -1 2496824..2497441 + 205 115352310 - Bamb_2259 - hypothetical protein 2255 65.28 0 2497526..2498680 - 384 115352311 - Bamb_2260 - peptidase M14, carboxypeptidase A 2256 64.11 0 2498815..2499597 - 260 115352312 - Bamb_2261 - hypothetical protein 2257 69.88 0 2499655..2500152 + 165 115352313 - Bamb_2262 - hypothetical protein 2258 65.90 0 2500184..2501356 + 390 115352314 - Bamb_2263 - putative aminotransferase 2259 62.71 0 2501405..2502061 - 218 115352315 - Bamb_2264 - glutathione S-transferase-like protein 2260 68.81 0 2502273..2503064 + 263 115352316 - Bamb_2265 - enoyl-CoA hydratase 2261 63.64 0 2503238..2503930 + 230 115352317 - Bamb_2266 - glutathione S-transferase domain-containing protein 2262 67.30 0 2503982..2504458 - 158 115352318 - Bamb_2267 - dehydratase 2263 62.99 0 2504455..2504916 - 153 115352319 - Bamb_2268 - dehydratase 2264 69.93 0 2504951..2506084 - 377 115352320 - Bamb_2269 - acyl-CoA dehydrogenase domain-containing protein 2265 66.83 0 2506104..2507300 - 398 115352321 - Bamb_2270 - acyl-CoA dehydrogenase domain-containing protein 2266 65.48 0 2507355..2507777 - 140 115352322 - Bamb_2271 - hypothetical protein 2267 63.45 0 2507916..2508506 - 196 115352323 - Bamb_2272 - NUDIX hydrolase 2268 60.94 -1 2508674..2508970 - 98 115352324 - Bamb_2273 - hypothetical protein 2269 64.62 0 2508970..2510436 - 488 115352325 - Bamb_2274 - NADH dehydrogenase subunit N 2270 61.97 -1 2510461..2511951 - 496 115352326 - Bamb_2275 - NADH dehydrogenase subunit M 2271 62.82 0 2511970..2514024 - 684 115352327 - Bamb_2276 - NADH dehydrogenase subunit L 2272 56.54 -2 2514042..2514347 - 101 115352328 - Bamb_2277 - NADH dehydrogenase subunit K 2273 62.52 -1 2514365..2515015 - 216 115352329 - Bamb_2278 - NADH dehydrogenase subunit J 2274 61.15 -1 2515130..2515618 - 162 115352330 - Bamb_2279 - NADH dehydrogenase subunit I 2275 64.04 0 2515634..2516701 - 355 115352331 - Bamb_2280 - NADH dehydrogenase subunit H 2276 66.92 0 2516702..2519032 - 776 115352332 - Bamb_2281 - NADH dehydrogenase subunit G 2277 64.61 0 2519117..2520427 - 436 115352333 - Bamb_2282 - NADH-quinone oxidoreductase, F subunit 2278 60.70 -1 2520424..2520909 - 161 115352334 - Bamb_2283 - NADH dehydrogenase subunit E 2279 62.36 -1 2521078..2522331 - 417 115352335 - Bamb_2284 - NADH dehydrogenase subunit D 2280 63.35 0 2522341..2522943 - 200 115352336 - Bamb_2285 - NADH dehydrogenase subunit C 2281 65.00 0 2522965..2523444 - 159 115352337 - Bamb_2286 - NADH dehydrogenase subunit B 2282 55.83 -2 2523508..2523867 - 119 115352338 - Bamb_2287 - NADH dehydrogenase subunit A 2283 68.78 0 2524217..2524594 - 125 115352339 secG Bamb_2288 - preprotein translocase subunit SecG 2284 69.44 0 2524667..2525422 - 251 115352340 tpiA Bamb_2289 - triosephosphate isomerase 2285 68.43 0 2525564..2526583 - 339 115352341 - Bamb_2290 - alcohol dehydrogenase 2286 64.76 0 2526727..2528871 - 714 115352342 - Bamb_2291 - polynucleotide phosphorylase/polyadenylase 2287 60.74 -1 2529163..2529432 - 89 115352343 rpsO Bamb_2292 - 30S ribosomal protein S15 2288 69.76 0 2529549..2530808 - 419 115352344 - Bamb_2293 - branched chain amino acid ABC transporter periplasmic ligand-binding protein 2289 64.33 0 2530997..2531509 + 170 115352345 - Bamb_2294 - hypothetical protein 2290 52.87 -2 2531540..2531800 + 86 115352346 - Bamb_2295 - hypothetical protein 2291 71.34 +1 2531903..2532544 + 213 115352347 - Bamb_2296 - carbonate dehydratase 2292 70.02 0 2532582..2534132 + 516 115352348 - Bamb_2297 - sulphate transporter 2293 63.95 0 2534204..2535748 - 514 115352349 - Bamb_2298 - 2-isopropylmalate synthase 2294 68.16 0 2536068..2536937 - 289 115352350 - Bamb_2299 - CDP-diacylglycerol--serine O-phosphatidyltransferase 2295 65.89 0 2536953..2537597 - 214 115352351 - Bamb_2300 - phosphatidylserine decarboxylase 2296 63.82 0 2537725..2538741 - 338 115352352 - Bamb_2301 - ketol-acid reductoisomerase 2297 59.76 -1 2538838..2539329 - 163 115352353 ilvH Bamb_2302 - acetolactate synthase 3 regulatory subunit 2298 62.93 0 2539442..2541205 - 587 115352354 - Bamb_2303 - acetolactate synthase 3 catalytic subunit 2299 61.70 -1 2541560..2542123 + 187 115352355 - Bamb_2304 - RNA polymerase factor sigma-70 2300 71.88 +1 2542120..2542560 + 146 115352356 - Bamb_2305 - hypothetical protein 2301 70.98 0 2542587..2543351 + 254 115352357 - Bamb_2306 - hypothetical protein 2302 72.94 +1 2543358..2543867 + 169 115352358 - Bamb_2307 - RDD domain-containing protein 2303 65.86 0 2544056..2545048 + 330 115352359 - Bamb_2308 - metallophosphoesterase 2304 67.25 0 2545078..2546112 + 344 115352360 - Bamb_2309 - glycosyl transferase, group 1 2305 67.60 0 2546109..2546645 + 178 115352361 - Bamb_2310 - diacylglycerol kinase 2306 61.24 -1 2546839..2547594 + 251 115352362 - Bamb_2311 - TetR family transcriptional regulator 2307 67.35 0 2547591..2548175 + 194 115352363 - Bamb_2312 - hypothetical protein 2308 72.97 +1 2548198..2548959 + 253 115352364 - Bamb_2313 - glucose-1-dehydrogenase 2309 70.95 0 2549149..2551086 + 645 115352365 - Bamb_2314 - glycosyltransferase 2310 69.09 0 2551167..2551784 - 205 115352366 - Bamb_2315 - hypothetical protein 2311 70.90 0 2551781..2552512 - 243 115352367 - Bamb_2316 - threonyl/alanyl tRNA synthetase, SAD 2312 67.88 0 2552617..2553027 - 136 115352368 - Bamb_2317 - globin 2313 73.17 +1 2553071..2555686 - 871 115352369 - Bamb_2318 - hypothetical protein 2314 71.52 +1 2555683..2556300 - 205 115352370 - Bamb_2319 - hypothetical protein 2315 65.42 0 2556523..2556843 - 106 115352371 - Bamb_2320 - small multidrug resistance protein 2316 70.21 0 2557005..2557286 - 93 115352372 - Bamb_2321 - hypothetical protein 2317 68.53 0 2557448..2558146 - 232 115352373 - Bamb_2322 - two component transcriptional regulator 2318 71.21 +1 2558139..2560976 - 945 115352374 - Bamb_2323 - osmosensitive K+ channel signal transduction histidine kinase 2319 70.96 0 2561122..2561703 - 193 115352375 - Bamb_2324 - potassium-transporting ATPase, C subunit 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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