version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2177 65.81 0 2400486..2401301 + 271 115352233 - Bamb_2182 - exodeoxyribonuclease III Xth 2178 71.14 0 2401328..2403451 - 707 115352234 - Bamb_2183 - peptidase S9 prolyl oligopeptidase 2179 69.88 0 2403532..2405058 - 508 115352235 - Bamb_2184 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 2180 66.32 0 2405104..2406246 - 380 115352236 - Bamb_2185 - signal transduction histidine kinase, nitrogen specific, NtrB 2181 62.22 -1 2406408..2407823 - 471 115352237 - Bamb_2186 - glutamine synthetase, type I 2182 68.31 0 2408149..2408697 + 182 115352238 - Bamb_2187 - rhodanese domain-containing protein 2183 67.28 0 2408825..2409640 - 271 115352239 - Bamb_2188 - molybdopterin binding domain-containing protein 2184 67.87 0 2409637..2410464 - 275 115352240 - Bamb_2189 - hypothetical protein 2185 65.54 0 2410576..2411550 - 324 115352241 - Bamb_2190 - sterol desaturase-like protein 2186 65.56 0 2411567..2412556 - 329 115352242 - Bamb_2191 - hypothetical protein 2187 69.23 0 2412737..2416405 - 1222 115352243 - Bamb_2192 - ATP-dependent helicase HrpA 2188 66.88 0 2416966..2418345 + 459 115352244 - Bamb_2193 - N-acetylglutamate synthase 2189 62.68 0 2418395..2418670 + 91 115352245 - Bamb_2194 - hypothetical protein 2190 68.95 0 2418828..2420273 - 481 115352246 - Bamb_2195 - major facilitator transporter 2191 71.72 +1 2420361..2421665 - 434 115352247 - Bamb_2196 - L-carnitine dehydratase/bile acid-inducible protein F 2192 70.94 0 2421662..2423416 - 584 115352248 - Bamb_2197 - acyl-CoA dehydrogenase domain-containing protein 2193 68.99 0 2423589..2424491 + 300 115352249 - Bamb_2198 - LysR family transcriptional regulator 2194 62.96 0 2424502..2424690 - 62 115352250 - Bamb_2199 - hypothetical protein 2195 65.80 0 2425086..2426471 - 461 115352251 - Bamb_2200 - putative aminotransferase 2196 65.40 0 2426500..2427837 - 445 115352252 - Bamb_2201 - glutamate--ammonia ligase 2197 73.11 +1 2427850..2428656 - 268 115352253 - Bamb_2202 - peptidase C26 2198 67.74 0 2428804..2428896 - 30 115352254 - Bamb_2203 - hypothetical protein 2199 67.46 0 2428943..2429194 - 83 115352255 - Bamb_2204 - hypothetical protein 2200 68.30 0 2429385..2430182 - 265 115352256 - Bamb_2205 - N-formylglutamate amidohydrolase 2201 70.81 0 2430242..2431618 - 458 115352257 - Bamb_2206 - N-formimino-L-glutamate deiminase 2202 70.02 0 2431642..2432865 - 407 115352258 - Bamb_2207 - imidazolonepropionase 2203 72.80 +1 2432870..2433472 - 200 115352259 - Bamb_2208 - hypothetical protein 2204 66.61 0 2433511..2435199 - 562 115352260 - Bamb_2209 - urocanate hydratase 2205 65.66 0 2435238..2435933 - 231 115352261 - Bamb_2210 - histidine utilization repressor 2206 69.49 0 2435938..2437461 - 507 115352262 - Bamb_2211 - histidine ammonia-lyase 2207 65.66 0 2437616..2438608 + 330 115352263 - Bamb_2212 - extracellular solute-binding protein 2208 73.41 +1 2438630..2439385 - 251 115352264 - Bamb_2213 - 4'-phosphopantetheinyl transferase 2209 72.25 +1 2439528..2440601 - 357 115352265 - Bamb_2214 - alpha/beta hydrolase 2210 72.51 +1 2440720..2441661 + 313 115352266 - Bamb_2215 - LysR family transcriptional regulator 2211 71.21 +1 2442043..2443275 + 410 115352267 - Bamb_2216 - major facilitator transporter 2212 72.37 +1 2443398..2444975 - 525 115352268 - Bamb_2217 - deoxyribodipyrimidine photo-lyase 2213 69.93 0 2445167..2446147 - 326 115352269 - Bamb_2218 - phosphoesterase, DHHA1 2214 65.10 0 2446165..2446674 - 169 115352270 - Bamb_2219 - short chain dehydrogenase 2215 67.33 0 2447031..2448392 + 453 115352271 - Bamb_2220 - major facilitator transporter 2216 72.95 +1 2448379..2449428 + 349 115352272 - Bamb_2221 - 3-carboxymuconate cyclase-like protein 2217 68.59 0 2449503..2450540 - 345 115352273 - Bamb_2222 - AraC family transcriptional regulator 2218 64.15 0 2450767..2451879 + 370 115352274 - Bamb_2223 - hypothetical protein 2219 68.42 0 2451914..2452597 - 227 115352275 - Bamb_2224 - HAD family hydrolase 2220 60.96 -1 2453672..2456179 + 835 115352276 - Bamb_2225 - Rhs element Vgr protein 2221 55.15 -2 2456231..2459200 + 989 115352277 - Bamb_2226 - EF hand domain-containing protein 2222 61.51 -1 2460281..2460532 + 83 115352278 - Bamb_2227 - PAAR repeat-containing protein 2223 66.72 0 2460679..2462694 - 671 115352279 - Bamb_2228 - Na+/solute symporter 2224 69.28 0 2462698..2463042 - 114 115352280 - Bamb_2229 - membrane protein-like protein 2225 67.17 0 2463128..2465110 - 660 115352281 - Bamb_2230 - acetyl-CoA synthetase 2226 68.21 0 2465433..2466341 + 302 115352282 - Bamb_2231 - hypothetical protein 2227 62.71 0 2466456..2467061 + 201 115352283 - Bamb_2232 - hypothetical protein 2228 65.88 0 2467096..2468619 + 507 115352284 - Bamb_2233 - tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit 2229 56.18 -2 2468813..2469289 + 158 115352285 - Bamb_2234 - bacterioferritin 2230 70.49 0 2469336..2470199 + 287 115352286 - Bamb_2235 - glutamate racemase 2231 65.40 0 2470349..2470585 + 78 115352287 - Bamb_2236 - BFD/(2Fe-2S)-binding domain-containing protein 2232 68.99 0 2470803..2471534 + 243 115352288 - Bamb_2237 - TonB family protein 2233 65.98 0 2471569..2472300 + 243 115352289 - Bamb_2238 - MotA/TolQ/ExbB proton channel 2234 63.12 0 2472320..2472742 + 140 115352290 - Bamb_2239 - biopolymer transport protein ExbD/TolR 2235 66.77 0 2473108..2474085 - 325 115352291 - Bamb_2240 - LysR family transcriptional regulator 2236 68.96 0 2474208..2475080 + 290 115352292 - Bamb_2241 - pirin domain-containing protein 2237 62.76 0 2475180..2475665 + 161 115352293 - Bamb_2242 - hypothetical protein 2238 65.04 0 2475804..2476049 + 81 115352294 - Bamb_2243 - hypothetical protein 2239 67.45 0 2476368..2477765 - 465 115352295 - Bamb_2244 - polyferredoxin-like protein 2240 65.60 0 2477762..2478604 - 280 115352296 - Bamb_2245 - iron permease FTR1 2241 64.26 0 2478663..2478995 - 110 115352297 - Bamb_2246 - hypothetical protein 2242 63.41 0 2479051..2479602 - 183 115352298 - Bamb_2247 - hypothetical protein 2243 64.85 0 2479822..2481912 - 696 115352299 - Bamb_2248 - excinuclease ABC subunit B 2244 66.08 0 2482161..2483360 + 399 115352300 - Bamb_2249 - aromatic amino acid aminotransferase 2245 64.51 0 2483510..2484298 - 262 115352301 - Bamb_2250 - 3-hydroxybutyrate dehydrogenase 2246 65.43 0 2484463..2485434 + 323 115352302 - Bamb_2251 - aldo/keto reductase 2247 61.70 -1 2485545..2486390 + 281 115352303 - Bamb_2252 - hypothetical protein 2248 66.37 0 2486406..2486741 - 111 115352304 - Bamb_2253 - hypothetical protein 2249 57.82 -2 2486889..2487035 - 48 115352305 - Bamb_2254 - hypothetical protein 2250 62.22 -1 2487250..2487654 - 134 115352306 - Bamb_2255 - MerR family transcriptional regulator 2251 65.51 0 2493561..2494859 + 432 115352307 - Bamb_2256 - hypothetical protein 2252 67.15 0 2495076..2495906 + 276 115352308 - Bamb_2257 - two component LuxR family transcriptional regulator 2253 67.70 0 2495982..2496656 + 224 115352309 - Bamb_2258 - membrane protein-like protein 2254 62.30 -1 2496824..2497441 + 205 115352310 - Bamb_2259 - hypothetical protein 2255 65.28 0 2497526..2498680 - 384 115352311 - Bamb_2260 - peptidase M14, carboxypeptidase A 2256 64.11 0 2498815..2499597 - 260 115352312 - Bamb_2261 - hypothetical protein 2257 69.88 0 2499655..2500152 + 165 115352313 - Bamb_2262 - hypothetical protein 2258 65.90 0 2500184..2501356 + 390 115352314 - Bamb_2263 - putative aminotransferase 2259 62.71 0 2501405..2502061 - 218 115352315 - Bamb_2264 - glutathione S-transferase-like protein 2260 68.81 0 2502273..2503064 + 263 115352316 - Bamb_2265 - enoyl-CoA hydratase 2261 63.64 0 2503238..2503930 + 230 115352317 - Bamb_2266 - glutathione S-transferase domain-containing protein 2262 67.30 0 2503982..2504458 - 158 115352318 - Bamb_2267 - dehydratase 2263 62.99 0 2504455..2504916 - 153 115352319 - Bamb_2268 - dehydratase 2264 69.93 0 2504951..2506084 - 377 115352320 - Bamb_2269 - acyl-CoA dehydrogenase domain-containing protein 2265 66.83 0 2506104..2507300 - 398 115352321 - Bamb_2270 - acyl-CoA dehydrogenase domain-containing protein 2266 65.48 0 2507355..2507777 - 140 115352322 - Bamb_2271 - hypothetical protein 2267 63.45 0 2507916..2508506 - 196 115352323 - Bamb_2272 - NUDIX hydrolase 2268 60.94 -1 2508674..2508970 - 98 115352324 - Bamb_2273 - hypothetical protein 2269 64.62 0 2508970..2510436 - 488 115352325 - Bamb_2274 - NADH dehydrogenase subunit N 2270 61.97 -1 2510461..2511951 - 496 115352326 - Bamb_2275 - NADH dehydrogenase subunit M 2271 62.82 0 2511970..2514024 - 684 115352327 - Bamb_2276 - NADH dehydrogenase subunit L 2272 56.54 -2 2514042..2514347 - 101 115352328 - Bamb_2277 - NADH dehydrogenase subunit K 2273 62.52 -1 2514365..2515015 - 216 115352329 - Bamb_2278 - NADH dehydrogenase subunit J 2274 61.15 -1 2515130..2515618 - 162 115352330 - Bamb_2279 - NADH dehydrogenase subunit I 2275 64.04 0 2515634..2516701 - 355 115352331 - Bamb_2280 - NADH dehydrogenase subunit H 2276 66.92 0 2516702..2519032 - 776 115352332 - Bamb_2281 - NADH dehydrogenase subunit G 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0