version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2117 57.21 -2 2332948..2333349 - 133 115352173 - Bamb_2122 - hypothetical protein 2118 61.14 -1 2333421..2334542 - 373 115352174 - Bamb_2123 - histidine kinase 2119 68.81 0 2335237..2337897 + 886 115352175 - Bamb_2124 - DNA mismatch repair protein 2120 68.40 0 2337878..2339089 + 403 115352176 - Bamb_2125 - hypothetical protein 2121 61.88 -1 2339117..2339659 - 180 115352177 - Bamb_2126 - FKBP-type peptidyl-prolyl cis-trans isomerases 2-like protein 2122 66.09 0 2339692..2340915 + 407 115352178 - Bamb_2127 - cupin 4 family protein 2123 52.03 -2 2340970..2341215 + 81 115352179 - Bamb_2128 - hypothetical protein 2124 67.21 0 2341236..2341418 - 60 115352180 - Bamb_2129 - hypothetical protein 2125 68.73 0 2341530..2342306 - 258 115352181 - Bamb_2130 - beta-lactamase domain-containing protein 2126 67.72 0 2342311..2343453 - 380 115352182 - Bamb_2131 - NlpB/DapX family lipoprotein 2127 66.56 0 2343562..2344467 - 301 115352183 - Bamb_2132 - dihydrodipicolinate synthase 2128 71.31 +1 2344514..2345116 - 200 115352184 - Bamb_2133 - methyltransferase type 12 2129 65.75 0 2345126..2346328 - 400 115352185 - Bamb_2134 - tryptophanyl-tRNA synthetase 2130 66.82 0 2346337..2346999 - 220 115352186 - Bamb_2135 - peptidase M50 2131 68.25 0 2347049..2347681 - 210 115352187 - Bamb_2136 - Sua5/YciO/YrdC/YwlC family protein 2132 69.07 0 2347755..2348585 - 276 115352188 - Bamb_2137 - phosphotransferase domain-containing protein 2133 69.92 0 2348668..2349558 - 296 115352189 - Bamb_2138 - alpha/beta hydrolase fold 2134 72.18 +1 2349756..2350607 - 283 115352190 - Bamb_2139 - hypothetical protein 2135 63.24 0 2350764..2351288 + 174 115352191 - Bamb_2140 - hexapaptide repeat-containing transferase 2136 66.77 0 2351313..2352263 + 316 115352192 - Bamb_2141 - Hsp33 protein 2137 70.56 0 2352399..2352758 + 119 115352193 - Bamb_2142 - hypothetical protein 2138 65.26 0 2352865..2353290 - 141 115352194 ftsB Bamb_2143 - cell division protein FtsB 2139 63.63 0 2353372..2354655 - 427 115352195 eno Bamb_2144 - phosphopyruvate hydratase 2140 65.15 0 2354762..2355616 - 284 115352196 - Bamb_2145 - 2-dehydro-3-deoxyphosphooctonate aldolase 2141 62.45 -1 2355613..2357271 - 552 115352197 - Bamb_2146 - CTP synthetase 2142 69.98 0 2357444..2358289 - 281 115352198 - Bamb_2147 - hypothetical protein 2143 73.37 +1 2358312..2360801 - 829 115352199 - Bamb_2148 - DNA internalization-related competence protein ComEC/Rec2 2144 67.68 0 2360859..2361647 - 262 115352200 - Bamb_2149 - TatD-related deoxyribonuclease 2145 67.72 0 2361712..2362470 - 252 115352201 - Bamb_2150 - lipoprotein releasing system, ATP-binding protein 2146 66.43 0 2362463..2363716 - 417 115352202 - Bamb_2151 - LolC/E family lipoprotein releasing system, transmembrane protein 2147 73.35 +1 2363869..2364945 + 358 115352203 - Bamb_2152 - hypothetical protein 2148 71.38 +1 2364956..2366653 + 565 115352204 - Bamb_2153 - single-stranded-DNA-specific exonuclease RecJ 2149 63.80 0 2366689..2367909 + 406 115352205 - Bamb_2154 - peptide chain release factor 2 2150 65.88 0 2367985..2369511 + 508 115352206 lysS Bamb_2155 - lysyl-tRNA synthetase 2151 70.77 0 2369855..2370610 + 251 115352207 - Bamb_2156 - 17 kDa surface antigen 2152 57.62 -2 2370743..2370952 - 69 115352208 - Bamb_2157 - hypothetical protein 2153 60.82 -1 2371029..2371370 - 113 115352209 - Bamb_2158 - ferredoxin, 2Fe-2S type, ISC system 2154 68.22 0 2371459..2373327 - 622 115352210 hscA Bamb_2159 - chaperone protein HscA 2155 67.16 0 2373382..2373987 - 201 115352211 hscB Bamb_2160 - co-chaperone HscB 2156 62.33 -1 2374007..2374375 - 122 115352212 - Bamb_2161 - iron-sulfur cluster assembly protein IscA 2157 61.76 -1 2374393..2374800 - 135 115352213 - Bamb_2162 - scaffold protein 2158 64.05 0 2374869..2376092 - 407 115352214 - Bamb_2163 - cysteine desulfurase IscS 2159 66.48 0 2376166..2376705 - 179 115352215 - Bamb_2164 - BadM/Rrf2 family transcriptional regulator 2160 69.77 0 2376823..2377305 - 160 115352216 - Bamb_2165 - protein tyrosine phosphatase 2161 67.87 0 2377407..2377655 - 82 115352217 - Bamb_2166 - hypothetical protein 2162 68.15 0 2377762..2379174 - 470 115352218 - Bamb_2167 - 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 2163 67.63 0 2379209..2379931 - 240 115352219 - Bamb_2168 - hypothetical protein 2164 67.78 0 2380114..2380923 + 269 115352220 - Bamb_2169 - IclR family transcriptional regulator 2165 66.32 0 2381026..2382180 - 384 115352221 - Bamb_2170 - peptidase S11, D-alanyl-D-alanine carboxypeptidase 1 2166 61.02 -1 2382838..2383404 + 188 115352222 - Bamb_2171 - phasin family protein 2167 64.91 0 2383603..2385369 - 588 115352223 - Bamb_2172 - dihydrolipoamide dehydrogenase 2168 67.81 0 2385640..2387295 - 551 115352224 - Bamb_2173 - dihydrolipoamide acetyltransferase 2169 64.40 0 2387366..2390062 - 898 115352225 aceE Bamb_2174 - pyruvate dehydrogenase subunit E1 2170 66.07 0 2390336..2392852 + 838 115352226 - Bamb_2175 - multi-sensor signal transduction histidine kinase 2171 64.32 0 2392849..2393487 + 212 115352227 - Bamb_2176 - two component LuxR family transcriptional regulator 2172 68.07 0 2393729..2394586 + 285 115352228 - Bamb_2177 - methenyltetrahydrofolate cyclohydrolase 2173 67.86 0 2394843..2396930 + 695 115352229 - Bamb_2178 - oligopeptidase A 2174 68.31 0 2396991..2398208 - 405 115352230 - Bamb_2179 - DNA polymerase IV 2175 67.10 0 2398346..2399038 + 230 115352231 - Bamb_2180 - aspartate racemase 2176 65.17 0 2399366..2400169 + 267 115352232 - Bamb_2181 - hypothetical protein 2177 65.81 0 2400486..2401301 + 271 115352233 - Bamb_2182 - exodeoxyribonuclease III Xth 2178 71.14 0 2401328..2403451 - 707 115352234 - Bamb_2183 - peptidase S9 prolyl oligopeptidase 2179 69.88 0 2403532..2405058 - 508 115352235 - Bamb_2184 - nitrogen metabolism transcriptional regulator, NtrC, Fis family 2180 66.32 0 2405104..2406246 - 380 115352236 - Bamb_2185 - signal transduction histidine kinase, nitrogen specific, NtrB 2181 62.22 -1 2406408..2407823 - 471 115352237 - Bamb_2186 - glutamine synthetase, type I 2182 68.31 0 2408149..2408697 + 182 115352238 - Bamb_2187 - rhodanese domain-containing protein 2183 67.28 0 2408825..2409640 - 271 115352239 - Bamb_2188 - molybdopterin binding domain-containing protein 2184 67.87 0 2409637..2410464 - 275 115352240 - Bamb_2189 - hypothetical protein 2185 65.54 0 2410576..2411550 - 324 115352241 - Bamb_2190 - sterol desaturase-like protein 2186 65.56 0 2411567..2412556 - 329 115352242 - Bamb_2191 - hypothetical protein 2187 69.23 0 2412737..2416405 - 1222 115352243 - Bamb_2192 - ATP-dependent helicase HrpA 2188 66.88 0 2416966..2418345 + 459 115352244 - Bamb_2193 - N-acetylglutamate synthase 2189 62.68 0 2418395..2418670 + 91 115352245 - Bamb_2194 - hypothetical protein 2190 68.95 0 2418828..2420273 - 481 115352246 - Bamb_2195 - major facilitator transporter 2191 71.72 +1 2420361..2421665 - 434 115352247 - Bamb_2196 - L-carnitine dehydratase/bile acid-inducible protein F 2192 70.94 0 2421662..2423416 - 584 115352248 - Bamb_2197 - acyl-CoA dehydrogenase domain-containing protein 2193 68.99 0 2423589..2424491 + 300 115352249 - Bamb_2198 - LysR family transcriptional regulator 2194 62.96 0 2424502..2424690 - 62 115352250 - Bamb_2199 - hypothetical protein 2195 65.80 0 2425086..2426471 - 461 115352251 - Bamb_2200 - putative aminotransferase 2196 65.40 0 2426500..2427837 - 445 115352252 - Bamb_2201 - glutamate--ammonia ligase 2197 73.11 +1 2427850..2428656 - 268 115352253 - Bamb_2202 - peptidase C26 2198 67.74 0 2428804..2428896 - 30 115352254 - Bamb_2203 - hypothetical protein 2199 67.46 0 2428943..2429194 - 83 115352255 - Bamb_2204 - hypothetical protein 2200 68.30 0 2429385..2430182 - 265 115352256 - Bamb_2205 - N-formylglutamate amidohydrolase 2201 70.81 0 2430242..2431618 - 458 115352257 - Bamb_2206 - N-formimino-L-glutamate deiminase 2202 70.02 0 2431642..2432865 - 407 115352258 - Bamb_2207 - imidazolonepropionase 2203 72.80 +1 2432870..2433472 - 200 115352259 - Bamb_2208 - hypothetical protein 2204 66.61 0 2433511..2435199 - 562 115352260 - Bamb_2209 - urocanate hydratase 2205 65.66 0 2435238..2435933 - 231 115352261 - Bamb_2210 - histidine utilization repressor 2206 69.49 0 2435938..2437461 - 507 115352262 - Bamb_2211 - histidine ammonia-lyase 2207 65.66 0 2437616..2438608 + 330 115352263 - Bamb_2212 - extracellular solute-binding protein 2208 73.41 +1 2438630..2439385 - 251 115352264 - Bamb_2213 - 4'-phosphopantetheinyl transferase 2209 72.25 +1 2439528..2440601 - 357 115352265 - Bamb_2214 - alpha/beta hydrolase 2210 72.51 +1 2440720..2441661 + 313 115352266 - Bamb_2215 - LysR family transcriptional regulator 2211 71.21 +1 2442043..2443275 + 410 115352267 - Bamb_2216 - major facilitator transporter 2212 72.37 +1 2443398..2444975 - 525 115352268 - Bamb_2217 - deoxyribodipyrimidine photo-lyase 2213 69.93 0 2445167..2446147 - 326 115352269 - Bamb_2218 - phosphoesterase, DHHA1 2214 65.10 0 2446165..2446674 - 169 115352270 - Bamb_2219 - short chain dehydrogenase 2215 67.33 0 2447031..2448392 + 453 115352271 - Bamb_2220 - major facilitator transporter 2216 72.95 +1 2448379..2449428 + 349 115352272 - Bamb_2221 - 3-carboxymuconate cyclase-like protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0