version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2054 68.88 0 2257625..2261053 - 1142 115352110 - Bamb_2059 - chromosome segregation protein SMC 2055 71.23 +1 2261277..2262218 - 313 115352111 - Bamb_2060 - hypothetical protein 2056 68.81 0 2262478..2263641 + 387 115352112 - Bamb_2061 - hypothetical protein 2057 65.46 0 2263687..2264514 + 275 115352113 dapD Bamb_2062 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 2058 65.58 0 2264514..2264882 + 122 115352114 - Bamb_2063 - hypothetical protein 2059 69.12 0 2264973..2266112 + 379 115352115 - Bamb_2064 - succinyl-diaminopimelate desuccinylase 2060 68.21 0 2266124..2267032 + 302 115352116 - Bamb_2065 - N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2061 67.36 0 2267147..2268586 + 479 115352117 cls Bamb_2066 - cardiolipin synthetase 2062 63.33 0 2268707..2269186 - 159 115352118 - Bamb_2067 - glutathione peroxidase 2063 67.44 0 2269323..2271254 + 643 115352119 - Bamb_2068 - ABC transporter related 2064 66.67 0 2271435..2271701 - 88 115352120 - Bamb_2069 - hypothetical protein 2065 69.06 0 2271848..2273224 - 458 115352121 - Bamb_2070 - DNA repair protein RadA 2066 69.09 0 2273236..2274306 - 356 115352122 alr Bamb_2071 - alanine racemase 2067 64.76 0 2274525..2275832 + 435 115352123 - Bamb_2072 - hypothetical protein 2068 71.85 +1 2275891..2276700 + 269 115352124 - Bamb_2073 - phosphomethylpyrimidine kinase 2069 72.60 +1 2276719..2277678 - 319 115352125 - Bamb_2074 - hypothetical protein 2070 71.38 +1 2277675..2278778 - 367 115352126 - Bamb_2075 - phage SPO1 DNA polymerase-related protein 2071 66.67 0 2278765..2279265 - 166 115352127 - Bamb_2076 - ribosomal-protein-alanine acetyltransferase 2072 73.83 +1 2279262..2280029 - 255 115352128 - Bamb_2077 - peptidase M22, glycoprotease 2073 62.96 0 2280177..2280446 + 89 115352129 - Bamb_2078 - acyl-CoA-binding protein 2074 70.57 0 2280807..2282345 + 512 115352130 - Bamb_2079 - DEAD/DEAH box helicase domain-containing protein 2075 64.76 0 2282734..2284041 + 435 115352131 - Bamb_2080 - isocitrate lyase 2076 67.59 0 2284264..2284698 - 144 115352132 - Bamb_2081 - UspA domain-containing protein 2077 70.31 0 2284858..2285763 - 301 115352133 - Bamb_2082 - LysR family transcriptional regulator 2078 70.34 0 2285918..2286679 + 253 115352134 - Bamb_2083 - haloacid dehalogenase, type II 2079 64.97 0 2286747..2288339 + 530 115352135 - Bamb_2084 - malate synthase 2080 69.32 0 2288526..2288939 - 137 115352136 - Bamb_2085 - hypothetical protein 2081 70.29 0 2289248..2290129 + 293 115352137 - Bamb_2086 - AraC family transcriptional regulator 2082 66.02 0 2290157..2290621 - 154 115352138 - Bamb_2087 - GCN5-related N-acetyltransferase 2083 67.73 0 2291929..2293338 - 469 115352139 gltX Bamb_2088 - glutamyl-tRNA synthetase 2084 68.65 0 2293619..2294527 + 302 115352140 - Bamb_2089 - patatin 2085 65.33 0 2294655..2295326 - 223 115352141 - Bamb_2090 - NLP/P60 protein 2086 68.21 0 2295455..2297077 - 540 115352142 - Bamb_2091 - ABC transporter related 2087 67.67 0 2297074..2298171 - 365 115352143 - Bamb_2092 - binding-protein-dependent transport systems inner membrane component 2088 65.80 0 2298220..2299263 - 347 115352144 - Bamb_2093 - binding-protein-dependent transport systems inner membrane component 2089 68.21 0 2299315..2301198 - 627 115352145 - Bamb_2094 - extracellular solute-binding protein 2090 69.29 0 2301411..2301791 - 126 115352146 - Bamb_2095 - hypothetical protein 2091 69.65 0 2302137..2305355 + 1072 115352147 - Bamb_2096 - acriflavin resistance protein 2092 71.43 +1 2305345..2306520 + 391 115352148 - Bamb_2097 - RND family efflux transporter MFP subunit 2093 72.53 +1 2306513..2307928 + 471 115352149 - Bamb_2098 - RND efflux system outer membrane lipoprotein 2094 69.35 0 2307925..2308296 + 123 115352150 - Bamb_2099 - hypothetical protein 2095 70.27 0 2308375..2309040 - 221 115352151 - Bamb_2100 - two component transcriptional regulator 2096 69.54 0 2309060..2310451 - 463 115352152 - Bamb_2101 - periplasmic sensor signal transduction histidine kinase 2097 67.11 0 2310463..2311137 - 224 115352153 - Bamb_2102 - two component transcriptional regulator 2098 65.35 0 2311353..2311655 + 100 115352154 - Bamb_2103 - hypothetical protein 2099 63.96 0 2311756..2312088 - 110 115352155 - Bamb_2104 - cytochrome C oxidase subunit IV 2100 66.17 0 2312089..2312697 - 202 115352156 - Bamb_2105 - cytochrome c oxidase, subunit III 2101 62.98 0 2312697..2314703 - 668 115352157 - Bamb_2106 - cytochrome-c oxidase 2102 63.40 0 2314707..2315594 - 295 115352158 - Bamb_2107 - ubiquinol oxidase, subunit II 2103 65.82 0 2315882..2317411 - 509 115352159 - Bamb_2108 - proton-translocating NADH-quinone oxidoreductase, chain M 2104 63.08 0 2318197..2319450 - 417 115352160 - Bamb_2109 - aspartate kinase 2105 73.00 +1 2319790..2321211 - 473 115352161 - Bamb_2110 - tRNA(Ile)-lysidine synthetase 2106 64.51 0 2321255..2322226 - 323 115352162 - Bamb_2111 - acetyl-CoA carboxylase carboxyltransferase subunit alpha 2107 69.68 0 2322326..2323189 - 287 115352163 - Bamb_2112 - HhH-GPD family protein 2108 64.88 0 2323233..2324630 - 465 115352164 cysS Bamb_2113 - cysteinyl-tRNA synthetase 2109 68.65 0 2324832..2325587 + 251 115352165 - Bamb_2114 - TPR repeat-containing protein 2110 63.54 0 2325627..2326202 + 191 115352166 - Bamb_2115 - peptidylprolyl isomerase 2111 60.98 -1 2326291..2326782 + 163 115352167 - Bamb_2116 - peptidyl-prolyl cis-trans isomerase, cyclophilin type 2112 67.29 0 2326809..2327609 + 266 115352168 - Bamb_2117 - UDP-2,3-diacylglucosamine hydrolase 2113 68.60 0 2327667..2328440 - 257 115352169 - Bamb_2118 - serine O-acetyltransferase 2114 71.29 +1 2328736..2329557 - 273 115352170 - Bamb_2119 - RNA methyltransferase 2115 64.93 0 2329837..2330640 + 267 115352171 - Bamb_2120 - inositol monophosphatase 2116 66.67 0 2330951..2332573 + 540 115352172 - Bamb_2121 - FAD dependent oxidoreductase 2117 57.21 -2 2332948..2333349 - 133 115352173 - Bamb_2122 - hypothetical protein 2118 61.14 -1 2333421..2334542 - 373 115352174 - Bamb_2123 - histidine kinase 2119 68.81 0 2335237..2337897 + 886 115352175 - Bamb_2124 - DNA mismatch repair protein 2120 68.40 0 2337878..2339089 + 403 115352176 - Bamb_2125 - hypothetical protein 2121 61.88 -1 2339117..2339659 - 180 115352177 - Bamb_2126 - FKBP-type peptidyl-prolyl cis-trans isomerases 2-like protein 2122 66.09 0 2339692..2340915 + 407 115352178 - Bamb_2127 - cupin 4 family protein 2123 52.03 -2 2340970..2341215 + 81 115352179 - Bamb_2128 - hypothetical protein 2124 67.21 0 2341236..2341418 - 60 115352180 - Bamb_2129 - hypothetical protein 2125 68.73 0 2341530..2342306 - 258 115352181 - Bamb_2130 - beta-lactamase domain-containing protein 2126 67.72 0 2342311..2343453 - 380 115352182 - Bamb_2131 - NlpB/DapX family lipoprotein 2127 66.56 0 2343562..2344467 - 301 115352183 - Bamb_2132 - dihydrodipicolinate synthase 2128 71.31 +1 2344514..2345116 - 200 115352184 - Bamb_2133 - methyltransferase type 12 2129 65.75 0 2345126..2346328 - 400 115352185 - Bamb_2134 - tryptophanyl-tRNA synthetase 2130 66.82 0 2346337..2346999 - 220 115352186 - Bamb_2135 - peptidase M50 2131 68.25 0 2347049..2347681 - 210 115352187 - Bamb_2136 - Sua5/YciO/YrdC/YwlC family protein 2132 69.07 0 2347755..2348585 - 276 115352188 - Bamb_2137 - phosphotransferase domain-containing protein 2133 69.92 0 2348668..2349558 - 296 115352189 - Bamb_2138 - alpha/beta hydrolase fold 2134 72.18 +1 2349756..2350607 - 283 115352190 - Bamb_2139 - hypothetical protein 2135 63.24 0 2350764..2351288 + 174 115352191 - Bamb_2140 - hexapaptide repeat-containing transferase 2136 66.77 0 2351313..2352263 + 316 115352192 - Bamb_2141 - Hsp33 protein 2137 70.56 0 2352399..2352758 + 119 115352193 - Bamb_2142 - hypothetical protein 2138 65.26 0 2352865..2353290 - 141 115352194 ftsB Bamb_2143 - cell division protein FtsB 2139 63.63 0 2353372..2354655 - 427 115352195 eno Bamb_2144 - phosphopyruvate hydratase 2140 65.15 0 2354762..2355616 - 284 115352196 - Bamb_2145 - 2-dehydro-3-deoxyphosphooctonate aldolase 2141 62.45 -1 2355613..2357271 - 552 115352197 - Bamb_2146 - CTP synthetase 2142 69.98 0 2357444..2358289 - 281 115352198 - Bamb_2147 - hypothetical protein 2143 73.37 +1 2358312..2360801 - 829 115352199 - Bamb_2148 - DNA internalization-related competence protein ComEC/Rec2 2144 67.68 0 2360859..2361647 - 262 115352200 - Bamb_2149 - TatD-related deoxyribonuclease 2145 67.72 0 2361712..2362470 - 252 115352201 - Bamb_2150 - lipoprotein releasing system, ATP-binding protein 2146 66.43 0 2362463..2363716 - 417 115352202 - Bamb_2151 - LolC/E family lipoprotein releasing system, transmembrane protein 2147 73.35 +1 2363869..2364945 + 358 115352203 - Bamb_2152 - hypothetical protein 2148 71.38 +1 2364956..2366653 + 565 115352204 - Bamb_2153 - single-stranded-DNA-specific exonuclease RecJ 2149 63.80 0 2366689..2367909 + 406 115352205 - Bamb_2154 - peptide chain release factor 2 2150 65.88 0 2367985..2369511 + 508 115352206 lysS Bamb_2155 - lysyl-tRNA synthetase 2151 70.77 0 2369855..2370610 + 251 115352207 - Bamb_2156 - 17 kDa surface antigen 2152 57.62 -2 2370743..2370952 - 69 115352208 - Bamb_2157 - hypothetical protein 2153 60.82 -1 2371029..2371370 - 113 115352209 - Bamb_2158 - ferredoxin, 2Fe-2S type, ISC system 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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