version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 131 69.13 0 153727..156654 - 975 115350187 - Bamb_0131 - glycine dehydrogenase 132 63.42 0 156720..157181 - 153 115350188 - Bamb_0132 - glycine cleavage system H protein 133 67.46 0 157215..158348 - 377 115350189 gcvT Bamb_0133 - glycine cleavage system aminomethyltransferase T 134 70.19 0 158800..159168 - 122 115350190 - Bamb_0134 - hypothetical protein 135 70.47 0 159394..160446 - 350 115350191 - Bamb_0135 - oxidoreductase domain-containing protein 136 76.90 +2 160670..161392 - 240 115350192 - Bamb_0136 - hypothetical protein 137 65.61 0 161674..163761 + 695 115350193 - Bamb_0137 - UvrD/REP helicase 138 68.87 0 163850..164758 - 302 115350194 - Bamb_0138 - cytochrome c, class I 139 60.70 -1 165180..165464 - 94 115350195 - Bamb_0139 - XRE family transcriptional regulator 140 55.24 -2 165457..165771 - 104 115350196 - Bamb_0140 - hypothetical protein 141 70.89 0 165992..167578 + 528 115350197 - Bamb_0141 - hypothetical protein 142 71.76 +1 167606..170392 - 928 115350198 - Bamb_0142 - hypothetical protein 143 67.74 0 170389..171597 - 402 115350199 - Bamb_0143 - TDP-4-oxo-6-deoxy-D-glucose transaminase 144 67.74 0 171659..172309 - 216 115350200 - Bamb_0144 - SAM-binding motif-containing protein 145 66.67 0 172320..173027 - 235 115350201 - Bamb_0145 - hypothetical protein 146 69.05 0 173033..174418 - 461 115350202 - Bamb_0146 - FAD dependent oxidoreductase 147 66.79 0 174415..175200 - 261 115350203 - Bamb_0147 - hypothetical protein 148 69.35 0 175541..177400 + 619 115350204 - Bamb_0148 - TPR repeat-containing protein 149 65.92 0 177397..178338 + 313 115350205 - Bamb_0149 - NAD-dependent epimerase/dehydratase 150 69.24 0 178335..179540 + 401 115350206 - Bamb_0150 - putative methyltransferase 151 69.86 0 179553..182054 + 833 115350207 - Bamb_0151 - TPR repeat-containing protein 152 68.36 0 182051..184537 + 828 115350208 - Bamb_0152 - TPR repeat-containing protein 153 70.02 0 184534..186798 + 754 115350209 - Bamb_0153 - TPR repeat-containing protein 154 67.68 0 186944..187240 - 98 115350210 - Bamb_0154 - hypothetical protein 155 66.18 0 187276..188703 - 475 115350211 - Bamb_0155 - flagellar hook-associated 2 domain-containing protein 156 63.27 0 188891..189715 - 274 115350212 - Bamb_0156 - flagellin 157 57.28 -2 190257..190469 + 70 115350213 - Bamb_0157 - 30S ribosomal protein S21 158 64.85 0 190724..191329 - 201 115350214 - Bamb_0158 - DNA-3-methyladenine glycosylase I 159 75.28 +1 191471..192352 + 293 115350215 - Bamb_0159 - ATPase, BadF/BadG/BcrA/BcrD type 160 67.12 0 192601..193476 + 291 115350216 - Bamb_0160 - Cof-like hydrolase 161 67.34 0 193582..194322 - 246 115350217 - Bamb_0161 - aquaporin Z 162 62.63 -1 194621..194917 + 98 115350218 - Bamb_0162 - histone family protein nucleoid-structuring protein H-NS 163 67.04 0 195021..196085 - 354 115350219 - Bamb_0163 - glycosyl transferase, group 1 164 63.86 0 196752..197072 + 106 115350220 - Bamb_0164 - transcriptional activator FlhD 165 65.59 0 197168..197722 + 184 115350221 - Bamb_0165 - transcriptional activator FlhC 166 64.46 0 197902..198762 + 286 115350222 - Bamb_0166 - flagellar motor protein MotA 167 67.55 0 198776..199795 + 339 115350223 motB Bamb_0167 - flagellar motor protein MotB 168 69.58 0 199975..200352 + 125 115350224 - Bamb_0168 - response regulator receiver protein 169 69.84 0 200386..202620 + 744 115350225 - Bamb_0169 - CheA signal transduction histidine kinases 170 63.95 0 202669..203184 + 171 115350226 - Bamb_0170 - CheW protein 171 71.39 +1 203222..205168 + 648 115350227 - Bamb_0171 - methyl-accepting chemotaxis sensory transducer 172 68.81 0 205172..206149 + 325 115350228 - Bamb_0172 - MCP methyltransferase, CheR-type 173 70.60 0 206146..206907 + 253 115350229 - Bamb_0173 - chemoreceptor glutamine deamidase CheD 174 70.27 0 206913..207995 + 360 115350230 - Bamb_0174 - chemotaxis-specific methylesterase 175 64.39 0 208063..208458 + 131 115350231 - Bamb_0175 - response regulator receiver protein 176 69.67 0 208460..209191 + 243 115350232 - Bamb_0176 - chemotaxis regulator CheZ 177 74.40 +1 209489..209992 + 167 115350233 - Bamb_0177 - hypothetical protein 178 66.75 0 210009..211238 + 409 115350234 - Bamb_0178 - hypothetical protein 179 68.07 0 211406..211903 + 165 115350235 - Bamb_0179 - 3-demethylubiquinone-9 3-methyltransferase 180 65.09 0 212268..212648 + 126 115350236 - Bamb_0180 - hypothetical protein 181 69.58 0 212915..214114 + 399 115350237 flhB Bamb_0181 - flagellar biosynthesis protein FlhB 182 67.90 0 214111..216213 + 700 115350238 flhA Bamb_0182 - flagellar biosynthesis protein FlhA 183 70.85 0 216210..217976 + 588 115350239 flhF Bamb_0183 - flagellar biosynthesis regulator FlhF 184 72.41 +1 217969..218787 + 272 115350240 - Bamb_0184 - flagellar biosynthesisprotein, FlhG 185 68.44 0 218805..219536 + 243 115350241 fliA Bamb_0185 - flagellar biosynthesis sigma factor 186 63.85 0 219887..221305 + 472 115350242 - Bamb_0186 - S-adenosyl-L-homocysteine hydrolase 187 62.15 -1 221461..221814 + 117 115350243 - Bamb_0187 - membrane protein of unknown function 188 66.55 0 221839..222669 + 276 115350244 - Bamb_0188 - 5,10-methylenetetrahydrofolate reductase 189 72.01 +1 222772..224250 - 492 115350245 - Bamb_0189 - amidase 190 69.41 0 224331..225023 - 230 115350246 - Bamb_0190 - carboxymethylenebutenolidase 191 75.19 +1 225305..226384 + 359 115350247 - Bamb_0191 - 2-nitropropane dioxygenase, NPD 192 63.87 0 226836..227978 + 380 115350248 - Bamb_0192 - extracellular ligand-binding receptor 193 72.10 +1 228099..229313 - 404 115350249 - Bamb_0193 - major facilitator transporter 194 72.29 +1 229827..230573 + 248 115350250 - Bamb_0194 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 195 62.24 -1 230929..231222 + 97 115350251 - Bamb_0195 - histone family protein nucleoid-structuring protein H-NS 196 66.42 0 231404..232618 + 404 115350252 - Bamb_0196 - cation diffusion facilitator family transporter 197 62.85 0 232646..233116 - 156 115350253 - Bamb_0197 - AsnC family transcriptional regulator 198 66.67 0 233196..233855 - 219 115350254 - Bamb_0198 - hypothetical protein 199 66.82 0 233852..234496 - 214 115350255 - Bamb_0199 - beta-lactamase domain-containing protein 200 63.89 0 235155..235766 + 203 115350256 - Bamb_0200 - rare lipoprotein A 201 71.49 +1 235863..236753 - 296 115350257 - Bamb_0201 - hypothetical protein 202 72.73 +1 236800..237228 + 142 115350258 - Bamb_0202 - hypothetical protein 203 70.09 0 237355..237939 + 194 115350259 - Bamb_0203 - phosphoheptose isomerase 204 67.67 0 237957..238754 + 265 115350260 - Bamb_0204 - transport-associated 205 68.33 0 238751..239110 + 119 115350261 - Bamb_0205 - cytochrome c, class I 206 60.32 -1 240397..242964 + 855 115350262 - Bamb_0207 - Rhs element Vgr protein 207 60.13 -1 242980..243606 + 208 115350263 - Bamb_0208 - hypothetical protein 208 58.55 -1 243603..245783 + 726 115350264 - Bamb_0209 - hypothetical protein 209 60.14 -1 245816..246703 + 295 115350265 - Bamb_0210 - hypothetical protein 210 57.45 -2 246714..246995 + 93 115350266 - Bamb_0211 - PAAR repeat-containing protein 211 69.90 0 247296..247976 - 226 115350267 - Bamb_0212 - hypothetical protein 212 71.26 +1 248056..249144 + 362 115350268 - Bamb_0213 - arginase/agmatinase/formiminoglutamase 213 59.97 -1 249373..250104 + 243 115350269 - Bamb_0214 - hypothetical protein 214 59.56 -1 250166..250531 + 121 115350270 - Bamb_0215 - hypothetical protein 215 71.03 0 250641..252038 - 465 115350271 - Bamb_0216 - glucarate dehydratase 216 66.67 0 252111..253451 - 446 115350272 - Bamb_0217 - d-galactonate transporter 217 73.30 +1 253751..254383 + 210 115350273 - Bamb_0218 - hypothetical protein 218 70.70 0 254380..255717 + 445 115350274 - Bamb_0219 - carotenoid oxygenase 219 67.69 0 255731..256897 - 388 115350275 - Bamb_0220 - hypothetical protein 220 68.48 0 256906..258060 - 384 115350276 - Bamb_0221 - hypothetical protein 221 67.95 0 258079..258777 - 232 115350277 - Bamb_0222 - ABC transporter related 222 71.31 +1 258788..259993 - 401 115350278 - Bamb_0223 - RND family efflux transporter MFP subunit 223 61.81 -1 260294..260602 + 102 115350279 - Bamb_0224 - hypothetical protein 224 74.35 +1 260677..261483 - 268 115350280 - Bamb_0225 - hypothetical protein 225 72.07 +1 261581..262450 + 289 115350281 - Bamb_0226 - 6-phosphogluconate dehydrogenase, NAD-binding 226 68.08 0 262522..263157 + 211 115350282 - Bamb_0227 - lysine exporter protein LysE/YggA 227 76.37 +2 263229..264506 - 425 115350283 - Bamb_0228 - major facilitator transporter 228 73.40 +1 264604..265524 + 306 115350284 - Bamb_0229 - LysR family transcriptional regulator 229 67.03 0 265738..266571 - 277 115350285 - Bamb_0230 - OmpW family protein 230 67.15 0 266588..267829 - 413 115350286 - Bamb_0231 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.