version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1727 64.00 0 1914142..1914966 + 274 115351783 - Bamb_1732 - competence lipoprotein ComL 1728 69.07 0 1915045..1917288 - 747 115351784 - Bamb_1733 - helicase c2 1729 55.09 -2 1917344..1917559 - 71 115351785 - Bamb_1734 - hypothetical protein 1730 66.93 0 1917637..1918389 - 250 115351786 - Bamb_1735 - hypothetical protein 1731 68.04 0 1918548..1920872 + 774 115351787 - Bamb_1736 - RNA-binding S1 domain-containing protein 1732 64.94 0 1920984..1922897 - 637 115351788 - Bamb_1737 - K+ potassium transporter 1733 63.82 0 1923171..1923767 - 198 115351789 - Bamb_1738 - phosphoribosyltransferase 1734 65.70 0 1923776..1925122 - 448 115351790 - Bamb_1739 - adenylosuccinate synthetase 1735 69.80 0 1925236..1926384 - 382 115351791 hisZ Bamb_1740 - ATP phosphoribosyltransferase regulatory subunit 1736 61.98 -1 1926498..1926689 - 63 115351792 - Bamb_1741 - hypothetical protein 1737 67.67 0 1926726..1927625 - 299 115351793 - Bamb_1742 - HflC protein 1738 69.60 0 1927640..1929001 - 453 115351794 - Bamb_1743 - HflK protein 1739 64.82 0 1929049..1930239 - 396 115351795 - Bamb_1744 - small GTP-binding protein 1740 55.14 -2 1930297..1930539 - 80 115351796 hfq Bamb_1745 - RNA-binding protein Hfq 1741 64.80 0 1930694..1932031 - 445 115351797 engA Bamb_1746 - GTP-binding protein EngA 1742 67.89 0 1932279..1933424 - 381 115351798 - Bamb_1747 - Pyrrolo-quinoline quinone 1743 67.30 0 1933465..1934094 - 209 115351799 - Bamb_1748 - hypothetical protein 1744 64.35 0 1934151..1935491 - 446 115351800 hisS Bamb_1749 - histidyl-tRNA synthetase 1745 67.50 0 1935508..1936824 - 438 115351801 ispG Bamb_1750 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1746 71.57 +1 1936919..1937938 - 339 115351802 - Bamb_1751 - XRE family transcriptional regulator 1747 64.21 0 1938115..1939254 - 379 115351803 - Bamb_1752 - radical SAM protein 1748 60.56 -1 1939310..1939735 - 141 115351804 ndk Bamb_1753 - nucleoside diphosphate kinase 1749 63.95 0 1939985..1940683 + 232 115351805 - Bamb_1754 - hypothetical protein 1750 67.15 0 1940749..1942203 - 484 115351806 rumA Bamb_1755 - 23S rRNA 5-methyluridine methyltransferase 1751 71.66 +1 1942350..1943210 + 286 115351807 - Bamb_1756 - endonuclease/exonuclease/phosphatase 1752 63.84 0 1943238..1944014 - 258 115351808 - Bamb_1757 - 3'-5' exonuclease 1753 65.84 0 1944018..1945103 - 361 115351809 - Bamb_1758 - RNA polymerase sigma factor RpoS 1754 66.89 0 1945115..1946002 - 295 115351810 - Bamb_1759 - peptidase M23B 1755 70.74 0 1946008..1946940 - 310 115351811 - Bamb_1760 - protein-L-isoaspartate O-methyltransferase 1756 66.67 0 1946937..1947698 - 253 115351812 surE Bamb_1761 - stationary phase survival protein SurE 1757 68.66 0 1947910..1949115 - 401 115351813 - Bamb_1762 - L-carnitine dehydratase/bile acid-inducible protein F 1758 68.84 0 1949164..1949760 - 198 115351814 recR Bamb_1763 - recombination protein RecR 1759 62.69 0 1949801..1950127 - 108 115351815 - Bamb_1764 - hypothetical protein 1760 71.76 +1 1950222..1952696 - 824 115351816 - Bamb_1765 - DNA polymerase III subunits gamma and tau 1761 61.77 -1 1953325..1953651 + 108 115351817 - Bamb_1766 - thioredoxin 1762 61.12 -1 1953847..1955109 + 420 115351818 rho Bamb_1767 - transcription termination factor Rho 1763 69.26 0 1955239..1955739 + 166 115351819 - Bamb_1768 - MerR family transcriptional regulator 1764 66.54 0 1955736..1957292 + 518 115351820 - Bamb_1769 - major facilitator transporter 1765 67.15 0 1957330..1958160 + 276 115351821 - Bamb_1770 - hypothetical protein 1766 55.68 -2 1958319..1958582 + 87 115351822 rpmE2 Bamb_1771 - 50S ribosomal protein L31 type B 1767 69.91 0 1958799..1960556 + 585 115351823 - Bamb_1772 - glycosyltransferase 1768 68.95 0 1960559..1961914 + 451 115351824 - Bamb_1773 - MATE efflux family protein 1769 72.77 +1 1961930..1962895 - 321 115351825 - Bamb_1774 - lipoyl synthase 1770 69.71 0 1962898..1964013 - 371 115351826 - Bamb_1775 - branched-chain alpha-keto acid dehydrogenase subunit E2 1771 67.46 0 1964018..1965022 - 334 115351827 - Bamb_1776 - transketolase, central region 1772 67.99 0 1965091..1966074 - 327 115351828 - Bamb_1777 - pyruvate dehydrogenase (acetyl-transferring) 1773 73.28 +1 1966173..1967231 - 352 115351829 - Bamb_1778 - ATP-NAD/AcoX kinase 1774 67.80 0 1967292..1967555 - 87 115351830 - Bamb_1779 - hypothetical protein 1775 72.15 +1 1967755..1969686 + 643 115351831 - Bamb_1780 - Fis family GAF modulated sigma54 specific transcriptional regulator 1776 66.44 0 1969715..1970149 - 144 115351832 - Bamb_1781 - carboxymuconolactone decarboxylase 1777 65.15 0 1970133..1970594 - 153 115351833 - Bamb_1782 - MerR family transcriptional regulator 1778 70.10 0 1970895..1971506 + 203 115351834 - Bamb_1783 - hypothetical protein 1779 68.06 0 1971595..1972026 + 143 115351835 - Bamb_1784 - hypothetical protein 1780 65.63 0 1972162..1974759 - 865 115351836 - Bamb_1785 - ATPase 1781 68.98 0 1974905..1975423 - 172 115351837 - Bamb_1786 - BadM/Rrf2 family transcriptional regulator 1782 70.41 0 1975686..1976246 + 186 115351838 - Bamb_1787 - globin 1783 67.30 0 1976324..1976800 - 158 115351839 - Bamb_1788 - molybdopterin biosynthesis MoaE 1784 68.60 0 1976810..1977067 - 85 115351840 - Bamb_1789 - molybdopterin converting factor, subunit 1 1785 72.12 +1 1977087..1978334 - 415 115351841 - Bamb_1790 - molybdenum cofactor synthesis domain-containing protein 1786 66.05 0 1978585..1980036 - 483 115351842 - Bamb_1791 - threonine synthase 1787 67.27 0 1980051..1981379 - 442 115351843 - Bamb_1792 - homoserine dehydrogenase 1788 64.49 0 1981436..1982674 - 412 115351844 - Bamb_1793 - aminotransferase AlaT 1789 67.25 0 1982850..1983365 + 171 115351845 - Bamb_1794 - hypothetical protein 1790 67.38 0 1983501..1985177 + 558 115351846 - Bamb_1795 - glycosyl transferase family protein 1791 62.63 -1 1985191..1985562 + 123 115351847 - Bamb_1796 - hypothetical protein 1792 66.50 0 1985649..1986863 + 404 115351848 - Bamb_1797 - DegT/DnrJ/EryC1/StrS aminotransferase 1793 66.09 0 1986870..1987904 + 344 115351849 - Bamb_1798 - glycosyl transferase family protein 1794 69.62 0 1987901..1988848 + 315 115351850 - Bamb_1799 - hypothetical protein 1795 61.25 -1 1988845..1989897 + 350 115351851 - Bamb_1800 - hypothetical protein 1796 67.34 0 1989910..1990806 + 298 115351852 - Bamb_1801 - polysaccharide deacetylase 1797 60.39 -1 1990914..1991375 + 153 115351853 - Bamb_1802 - alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1798 67.27 0 1991708..1993528 + 606 115351854 - Bamb_1803 - PhoH family protein 1799 72.11 +1 1993765..1994829 + 354 115351855 - Bamb_1804 - NLP/P60 protein 1800 64.59 0 1994948..1995958 - 336 115351856 - Bamb_1805 - phosphate transporter 1801 59.97 -1 1995969..1996595 - 208 115351857 - Bamb_1806 - hypothetical protein 1802 63.20 0 1996734..1998116 - 460 115351858 - Bamb_1807 - replicative DNA helicase 1803 59.38 -1 1998260..1998712 - 150 115351859 rplI Bamb_1808 - 50S ribosomal protein L9 1804 58.33 -2 1998740..1999015 - 91 115351860 rpsR Bamb_1809 - 30S ribosomal protein S18 1805 59.67 -1 1999020..1999319 - 99 115351861 - Bamb_1810 - primosomal replication protein N-like protein 1806 58.40 -1 1999360..1999734 - 124 115351862 rpsF Bamb_1811 - 30S ribosomal protein S6 1807 76.27 +2 1999976..2000881 - 301 115351863 - Bamb_1812 - putative transmembrane anti-sigma factor 1808 73.21 +1 2000871..2001512 - 213 115351864 - Bamb_1813 - RNA polymerase sigma factor 1809 68.31 0 2001687..2002598 - 303 115351865 - Bamb_1814 - LysR family transcriptional regulator 1810 66.84 0 2002770..2004545 + 591 115351866 - Bamb_1815 - glyoxylate carboligase 1811 66.67 0 2004590..2005399 + 269 115351867 - Bamb_1816 - hydroxypyruvate isomerase 1812 66.67 0 2005441..2006334 + 297 115351868 - Bamb_1817 - 2-hydroxy-3-oxopropionate reductase 1813 61.57 -1 2006835..2007305 + 156 115351869 - Bamb_1818 - hypothetical protein 1814 71.65 +1 2007396..2008418 - 340 115351870 - Bamb_1819 - L-asparaginases, type II 1815 61.25 -1 2008615..2008983 + 122 115351871 - Bamb_1820 - PsiF repeat-containing protein 1816 70.59 0 2009303..2009761 + 152 115351872 - Bamb_1821 - hypothetical protein 1817 66.67 0 2009993..2010580 + 195 115351873 - Bamb_1822 - hypothetical protein 1818 65.26 0 2010677..2011741 - 354 115351874 - Bamb_1823 - glycosyl transferase, group 1 1819 72.28 +1 2011978..2013153 - 391 115351875 - Bamb_1824 - ATPase-like protein 1820 68.63 0 2013176..2014348 - 390 115351876 - Bamb_1825 - MscS mechanosensitive ion channel 1821 68.07 0 2014445..2014801 - 118 115351877 - Bamb_1826 - hypothetical protein 1822 65.96 0 2014921..2015631 - 236 115351878 - Bamb_1827 - ankyrin 1823 66.03 0 2015672..2016454 - 260 115351879 - Bamb_1828 - TatD family hydrolase 1824 71.14 0 2016534..2017562 - 342 115351880 - Bamb_1829 - DNA polymerase III subunit delta' 1825 69.24 0 2017581..2018201 - 206 115351881 tdk Bamb_1830 - thymidylate kinase 1826 68.04 0 2018201..2019220 - 339 115351882 - Bamb_1831 - aminodeoxychorismate lyase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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