version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1671 62.74 0 1851194..1852288 - 364 115351727 - Bamb_1675 - extracellular solute-binding protein 1672 63.73 0 1852644..1852847 + 67 115351728 - Bamb_1676 - hypothetical protein 1673 63.58 0 1853442..1854122 + 226 115351729 - Bamb_1677 - hypothetical protein 1674 66.12 0 1854237..1854974 + 245 115351730 - Bamb_1678 - putative periplasmic chaperone protein 1675 71.42 +1 1855003..1857546 + 847 115351731 - Bamb_1679 - fimbrial biogenesis outer membrane usher protein 1676 63.66 0 1857543..1858208 - 221 115351732 - Bamb_1680 - OmpW family protein 1677 69.27 0 1858250..1859440 - 396 115351733 - Bamb_1681 - 2-nitropropane dioxygenase, NPD 1678 67.73 0 1859569..1861077 - 502 115351734 - Bamb_1682 - betaine-aldehyde dehydrogenase 1679 66.12 0 1861273..1861638 + 121 115351735 - Bamb_1683 - hypothetical protein 1680 72.32 +1 1861788..1863026 - 412 115351736 - Bamb_1684 - major facilitator transporter 1681 72.70 +1 1863081..1863875 - 264 115351737 - Bamb_1685 - 2,3-dihydroxybenzoate-2,3-dehydrogenase 1682 71.85 +1 1863872..1867786 - 1304 115351738 - Bamb_1686 - amino acid adenylation domain-containing protein 1683 66.06 0 1867831..1868157 - 108 115351739 - Bamb_1687 - hypothetical protein 1684 69.18 0 1868154..1869029 - 291 115351740 - Bamb_1688 - isochorismatase 1685 71.24 +1 1869078..1870694 - 538 115351741 - Bamb_1689 - 2,3-dihydroxybenzoate-AMP ligase 1686 72.24 +1 1870691..1871875 - 394 115351742 - Bamb_1690 - isochorismate synthases 1687 67.71 0 1871920..1874118 - 732 115351743 - Bamb_1691 - TonB-dependent receptor, plug 1688 70.27 0 1874236..1875207 - 323 115351744 - Bamb_1692 - AraC family transcriptional regulator 1689 70.17 0 1875379..1876491 + 370 115351745 - Bamb_1693 - ABC-type Fe3+-hydroxamate transport system periplasmic component-like protein 1690 73.78 +1 1876493..1877434 + 313 115351746 - Bamb_1694 - putative esterase 1691 69.95 0 1877431..1878495 + 354 115351747 - Bamb_1695 - transport system permease protein 1692 71.36 +1 1878488..1879297 + 269 115351748 - Bamb_1696 - ABC transporter related 1693 69.79 0 1879423..1879998 + 191 115351749 - Bamb_1697 - polysaccharide deacetylase 1694 69.57 0 1880011..1880976 - 321 115351750 - Bamb_1698 - aminoglycoside phosphotransferase 1695 66.52 0 1881026..1881691 + 221 115351751 - Bamb_1699 - cephalosporin hydroxylase 1696 69.58 0 1881648..1882883 - 411 115351752 - Bamb_1700 - glycosyl transferase family protein 1697 71.07 0 1882861..1883928 - 355 115351753 - Bamb_1701 - asparagine synthase 1698 65.30 0 1883925..1884803 - 292 115351754 - Bamb_1702 - hypothetical protein 1699 67.07 0 1884805..1885797 - 330 115351755 - Bamb_1703 - aminoglycoside phosphotransferase 1700 63.73 0 1885798..1886547 - 249 115351756 - Bamb_1704 - hypothetical protein 1701 59.52 -1 1886790..1886915 - 41 115351757 - Bamb_1705 - ABC transporter, fused ATPase subunits 1702 54.12 -2 1887053..1887562 - 169 115351758 - Bamb_1706 - hypothetical protein 1703 53.04 -2 1888595..1889137 - 180 115351759 - Bamb_1708 - hypothetical protein 1704 62.59 -1 1889717..1891309 - 530 115351760 - Bamb_1709 - ABC transporter related 1705 67.77 0 1891477..1891929 + 150 115351761 - Bamb_1710 - hypothetical protein 1706 67.71 0 1892059..1894356 - 765 115351762 - Bamb_1711 - AsmA family protein 1707 68.66 0 1894409..1895209 + 266 115351763 - Bamb_1712 - ABC transporter related 1708 68.66 0 1895206..1896009 + 267 115351764 - Bamb_1713 - hypothetical protein 1709 70.89 0 1896065..1896538 - 157 115351765 - Bamb_1714 - hypothetical protein 1710 66.82 0 1896743..1897399 - 218 115351766 - Bamb_1715 - hypothetical protein 1711 69.22 0 1897455..1898474 - 339 115351767 - Bamb_1716 - alcohol dehydrogenase 1712 71.87 +1 1898596..1899537 + 313 115351768 - Bamb_1717 - LysR family transcriptional regulator 1713 67.30 0 1899622..1900572 + 316 115351769 - Bamb_1718 - phosphoserine phosphatase SerB 1714 66.58 0 1900650..1901834 - 394 115351770 - Bamb_1719 - cystathionine beta-lyase 1715 69.80 0 1901946..1902488 - 180 115351771 - Bamb_1720 - hypothetical protein 1716 70.98 0 1902678..1903604 - 308 115351772 - Bamb_1721 - ribokinase-like domain-containing protein 1717 64.98 0 1903608..1904969 - 453 115351773 - Bamb_1722 - MiaB-like tRNA modifying enzyme YliG 1718 60.00 -1 1905358..1905612 + 84 115351774 - Bamb_1723 - hypothetical protein 1719 69.02 0 1905701..1905997 - 98 115351775 - Bamb_1724 - hypothetical protein 1720 51.09 -2 1906443..1906718 + 91 115351776 - Bamb_1725 - hypothetical protein 1721 55.03 -2 1906971..1907537 - 188 115351777 - Bamb_1726 - polyhydroxyalkonate synthesis repressor, PhaR 1722 62.75 0 1907656..1908396 - 246 115351778 - Bamb_1727 - acetyacetyl-CoA reductase 1723 69.37 0 1908516..1909697 - 393 115351779 - Bamb_1728 - acetyl-CoA acetyltransferase 1724 66.35 0 1909797..1911671 - 624 115351780 - Bamb_1729 - poly(R)-hydroxyalkanoic acid synthase, class I 1725 73.10 +1 1912037..1912876 - 279 115351781 - Bamb_1730 - hypothetical protein 1726 69.54 0 1912883..1914100 - 405 115351782 - Bamb_1731 - RluA family pseudouridine synthase 1727 64.00 0 1914142..1914966 + 274 115351783 - Bamb_1732 - competence lipoprotein ComL 1728 69.07 0 1915045..1917288 - 747 115351784 - Bamb_1733 - helicase c2 1729 55.09 -2 1917344..1917559 - 71 115351785 - Bamb_1734 - hypothetical protein 1730 66.93 0 1917637..1918389 - 250 115351786 - Bamb_1735 - hypothetical protein 1731 68.04 0 1918548..1920872 + 774 115351787 - Bamb_1736 - RNA-binding S1 domain-containing protein 1732 64.94 0 1920984..1922897 - 637 115351788 - Bamb_1737 - K+ potassium transporter 1733 63.82 0 1923171..1923767 - 198 115351789 - Bamb_1738 - phosphoribosyltransferase 1734 65.70 0 1923776..1925122 - 448 115351790 - Bamb_1739 - adenylosuccinate synthetase 1735 69.80 0 1925236..1926384 - 382 115351791 hisZ Bamb_1740 - ATP phosphoribosyltransferase regulatory subunit 1736 61.98 -1 1926498..1926689 - 63 115351792 - Bamb_1741 - hypothetical protein 1737 67.67 0 1926726..1927625 - 299 115351793 - Bamb_1742 - HflC protein 1738 69.60 0 1927640..1929001 - 453 115351794 - Bamb_1743 - HflK protein 1739 64.82 0 1929049..1930239 - 396 115351795 - Bamb_1744 - small GTP-binding protein 1740 55.14 -2 1930297..1930539 - 80 115351796 hfq Bamb_1745 - RNA-binding protein Hfq 1741 64.80 0 1930694..1932031 - 445 115351797 engA Bamb_1746 - GTP-binding protein EngA 1742 67.89 0 1932279..1933424 - 381 115351798 - Bamb_1747 - Pyrrolo-quinoline quinone 1743 67.30 0 1933465..1934094 - 209 115351799 - Bamb_1748 - hypothetical protein 1744 64.35 0 1934151..1935491 - 446 115351800 hisS Bamb_1749 - histidyl-tRNA synthetase 1745 67.50 0 1935508..1936824 - 438 115351801 ispG Bamb_1750 - 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1746 71.57 +1 1936919..1937938 - 339 115351802 - Bamb_1751 - XRE family transcriptional regulator 1747 64.21 0 1938115..1939254 - 379 115351803 - Bamb_1752 - radical SAM protein 1748 60.56 -1 1939310..1939735 - 141 115351804 ndk Bamb_1753 - nucleoside diphosphate kinase 1749 63.95 0 1939985..1940683 + 232 115351805 - Bamb_1754 - hypothetical protein 1750 67.15 0 1940749..1942203 - 484 115351806 rumA Bamb_1755 - 23S rRNA 5-methyluridine methyltransferase 1751 71.66 +1 1942350..1943210 + 286 115351807 - Bamb_1756 - endonuclease/exonuclease/phosphatase 1752 63.84 0 1943238..1944014 - 258 115351808 - Bamb_1757 - 3'-5' exonuclease 1753 65.84 0 1944018..1945103 - 361 115351809 - Bamb_1758 - RNA polymerase sigma factor RpoS 1754 66.89 0 1945115..1946002 - 295 115351810 - Bamb_1759 - peptidase M23B 1755 70.74 0 1946008..1946940 - 310 115351811 - Bamb_1760 - protein-L-isoaspartate O-methyltransferase 1756 66.67 0 1946937..1947698 - 253 115351812 surE Bamb_1761 - stationary phase survival protein SurE 1757 68.66 0 1947910..1949115 - 401 115351813 - Bamb_1762 - L-carnitine dehydratase/bile acid-inducible protein F 1758 68.84 0 1949164..1949760 - 198 115351814 recR Bamb_1763 - recombination protein RecR 1759 62.69 0 1949801..1950127 - 108 115351815 - Bamb_1764 - hypothetical protein 1760 71.76 +1 1950222..1952696 - 824 115351816 - Bamb_1765 - DNA polymerase III subunits gamma and tau 1761 61.77 -1 1953325..1953651 + 108 115351817 - Bamb_1766 - thioredoxin 1762 61.12 -1 1953847..1955109 + 420 115351818 rho Bamb_1767 - transcription termination factor Rho 1763 69.26 0 1955239..1955739 + 166 115351819 - Bamb_1768 - MerR family transcriptional regulator 1764 66.54 0 1955736..1957292 + 518 115351820 - Bamb_1769 - major facilitator transporter 1765 67.15 0 1957330..1958160 + 276 115351821 - Bamb_1770 - hypothetical protein 1766 55.68 -2 1958319..1958582 + 87 115351822 rpmE2 Bamb_1771 - 50S ribosomal protein L31 type B 1767 69.91 0 1958799..1960556 + 585 115351823 - Bamb_1772 - glycosyltransferase 1768 68.95 0 1960559..1961914 + 451 115351824 - Bamb_1773 - MATE efflux family protein 1769 72.77 +1 1961930..1962895 - 321 115351825 - Bamb_1774 - lipoyl synthase 1770 69.71 0 1962898..1964013 - 371 115351826 - Bamb_1775 - branched-chain alpha-keto acid dehydrogenase subunit E2 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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