version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1572 75.08 +1 1743048..1744283 + 411 115351628 - Bamb_1575 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 1573 71.34 +1 1744280..1745371 + 363 115351629 cbiD Bamb_1576 - cobalt-precorrin-6A synthase 1574 73.68 +1 1745368..1746108 + 246 115351630 - Bamb_1577 - cobalt-precorrin-6x reductase 1575 68.86 0 1746152..1746880 + 242 115351631 - Bamb_1578 - precorrin-4 C11-methyltransferase 1576 71.73 +1 1746922..1748205 - 427 115351632 - Bamb_1579 - major facilitator transporter 1577 70.04 0 1748247..1748780 + 177 115351633 - Bamb_1580 - MarR family transcriptional regulator 1578 65.25 0 1749022..1749726 - 234 115351634 - Bamb_1581 - glutathione S-transferase domain-containing protein 1579 67.38 0 1749933..1751057 - 374 115351635 - Bamb_1582 - porin 1580 73.43 +1 1751322..1754189 - 955 115351636 - Bamb_1583 - ATP-dependent transcription regulator LuxR 1581 73.89 +1 1754297..1755238 + 313 115351637 - Bamb_1584 - hypothetical protein 1582 70.23 0 1755272..1756252 + 326 115351638 - Bamb_1585 - alcohol dehydrogenase 1583 67.73 0 1756263..1757111 + 282 115351639 - Bamb_1586 - taurine dioxygenase 1584 65.91 0 1757228..1758283 + 351 115351640 - Bamb_1587 - hypothetical protein 1585 71.48 +1 1758446..1759774 + 442 115351641 - Bamb_1588 - major facilitator transporter 1586 71.88 +1 1759807..1760382 + 191 115351642 - Bamb_1589 - hypothetical protein 1587 67.27 0 1760677..1761843 + 388 115351643 - Bamb_1590 - ABC transporter, periplasmic ligand binding protein 1588 68.52 0 1761893..1762972 + 359 115351644 - Bamb_1591 - ABC transporter related 1589 67.93 0 1763019..1763891 + 290 115351645 - Bamb_1592 - binding-protein-dependent transport systems inner membrane component 1590 67.75 0 1763891..1764814 + 307 115351646 - Bamb_1593 - binding-protein-dependent transport systems inner membrane component 1591 69.18 0 1765005..1765442 + 145 115351647 - Bamb_1594 - hypothetical protein 1592 69.26 0 1765775..1767010 + 411 115351648 - Bamb_1595 - extracellular ligand-binding receptor 1593 67.99 0 1768676..1770793 + 705 115351649 - Bamb_1596 - multi-sensor hybrid histidine kinase 1594 67.21 0 1770857..1773439 + 860 115351650 - Bamb_1597 - response regulator receiver modulated diguanylate cyclase/phosphodiesterase 1595 56.34 -2 1773562..1773774 + 70 115351651 - Bamb_1598 - hypothetical protein 1596 71.12 0 1774542..1775732 + 396 115351652 - Bamb_1599 - L-carnitine dehydratase/bile acid-inducible protein F 1597 69.26 0 1775754..1776716 + 320 115351653 - Bamb_1600 - pyruvate carboxyltransferase 1598 62.76 0 1776742..1777125 + 127 115351654 - Bamb_1601 - glyoxalase/bleomycin resistance protein/dioxygenase 1599 70.38 0 1777520..1778326 + 268 115351655 - Bamb_1602 - esterase/lipase-like protein 1600 69.13 0 1778486..1779379 + 297 115351656 - Bamb_1603 - LysR family transcriptional regulator 1601 67.01 0 1779447..1780904 - 485 115351657 - Bamb_1604 - major facilitator transporter 1602 68.14 0 1780901..1781374 - 157 115351658 - Bamb_1605 - hypothetical protein 1603 71.21 +1 1782766..1783866 + 366 115351659 - Bamb_1606 - 2-nitropropane dioxygenase, NPD 1604 64.52 0 1784060..1784431 + 123 115351660 - Bamb_1607 - glutathione-dependent formaldehyde-activating, GFA 1605 59.87 -1 1784696..1785151 + 151 115351661 - Bamb_1608 - MarR family transcriptional regulator 1606 68.55 0 1785255..1785998 - 247 115351662 - Bamb_1609 - FR47 domain-containing protein 1607 65.76 0 1786139..1786468 - 109 115351663 - Bamb_1610 - hypothetical protein 1608 66.67 0 1786541..1786867 - 108 115351664 - Bamb_1611 - hypothetical protein 1609 67.62 0 1786935..1787354 - 139 115351665 - Bamb_1612 - OsmC family protein 1610 66.88 0 1787628..1788092 - 154 115351666 - Bamb_1613 - endoribonuclease L-PSP 1611 67.85 0 1788356..1789288 + 310 115351667 - Bamb_1614 - LysR family transcriptional regulator 1612 65.96 0 1789380..1790087 - 235 115351668 - Bamb_1615 - short-chain dehydrogenase/reductase SDR 1613 65.88 0 1790159..1790413 - 84 115351669 - Bamb_1616 - hypothetical protein 1614 63.96 0 1790599..1791078 - 159 115351670 - Bamb_1617 - hypothetical protein 1615 68.84 0 1791178..1791453 + 91 115351671 - Bamb_1618 - hypothetical protein 1616 65.30 0 1791586..1792905 - 439 115351672 - Bamb_1619 - major facilitator transporter 1617 63.79 0 1793138..1794076 + 312 115351673 - Bamb_1620 - LysR family transcriptional regulator 1618 57.20 -2 1794482..1795294 + 270 115351674 - Bamb_1621 - LuxR family transcriptional regulator 1619 66.23 0 1795273..1796649 - 458 115351675 - Bamb_1622 - hypothetical protein 1620 67.88 0 1796867..1798270 - 467 115351676 - Bamb_1623 - major facilitator transporter 1621 64.34 0 1798309..1799166 - 285 115351677 - Bamb_1624 - glyoxalase/bleomycin resistance protein/dioxygenase 1622 61.30 -1 1799169..1800305 - 378 115351678 - Bamb_1625 - O-methyltransferase family protein 1623 65.25 0 1800302..1801291 - 329 115351679 - Bamb_1626 - hypothetical protein 1624 65.08 0 1801301..1801993 - 230 115351680 - Bamb_1627 - methyltransferase type 12 1625 65.19 0 1801990..1803687 - 565 115351681 - Bamb_1628 - WD-40 repeat-containing protein 1626 60.93 -1 1803684..1804328 - 214 115351682 ribA Bamb_1629 - GTP cyclohydrolase II 1627 59.83 -1 1804669..1804785 + 38 115351683 - Bamb_1630 - hypothetical protein 1628 70.97 0 1805030..1805308 - 92 115351684 - Bamb_1631 - hypothetical protein 1629 68.34 0 1805488..1806324 - 278 115351685 - Bamb_1632 - AraC family transcriptional regulator 1630 73.13 +1 1806428..1807927 + 499 115351686 - Bamb_1633 - RND efflux system outer membrane lipoprotein 1631 69.31 0 1807937..1809298 + 453 115351687 - Bamb_1634 - secretion protein HlyD family protein 1632 66.99 0 1809295..1810833 + 512 115351688 - Bamb_1635 - EmrB/QacA family drug resistance transporter 1633 61.42 -1 1811350..1812168 - 272 115351689 - Bamb_1637 - LuxR family transcriptional regulator 1634 66.31 0 1812328..1813173 + 281 115351690 - Bamb_1638 - Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1635 63.24 0 1813303..1814643 + 446 115351691 - Bamb_1639 - amino acid permease-associated region 1636 59.58 -1 1814633..1814872 + 79 115351692 - Bamb_1640 - hypothetical protein 1637 62.37 -1 1815059..1815547 - 162 115351693 - Bamb_1641 - YbaK/prolyl-tRNA synthetase associated region 1638 67.71 0 1816012..1816299 + 95 115351694 - Bamb_1642 - YciI-like protein 1639 62.99 0 1816309..1817286 - 325 115351695 - Bamb_1643 - magnesium and cobalt transport protein CorA 1640 68.94 0 1817480..1818226 + 248 115351696 - Bamb_1644 - hypothetical protein 1641 64.94 0 1818334..1819434 - 366 115351697 - Bamb_1645 - saccharopine dehydrogenase 1642 66.88 0 1819950..1820414 - 154 115351698 - Bamb_1646 - AsnC family transcriptional regulator 1643 66.11 0 1820769..1821311 + 180 115351699 - Bamb_1647 - hypothetical protein 1644 70.14 0 1821440..1821871 + 143 115351700 - Bamb_1648 - hypothetical protein 1645 65.56 0 1821972..1822334 - 120 115351701 - Bamb_1649 - hypothetical protein 1646 70.85 0 1822347..1823135 - 262 115351702 - Bamb_1650 - membrane protein 1647 70.50 0 1823190..1824233 - 347 115351703 - Bamb_1651 - LacI family transcription regulator 1648 69.77 0 1824556..1825521 - 321 115351704 - Bamb_1652 - gluconate 2-dehydrogenase 1649 66.43 0 1825527..1826807 - 426 115351705 - Bamb_1653 - major facilitator transporter 1650 70.09 0 1826968..1827960 - 330 115351706 - Bamb_1654 - ribokinase-like domain-containing protein 1651 72.81 +1 1827989..1828753 - 254 115351707 - Bamb_1655 - xylose isomerase domain-containing protein 1652 72.82 +1 1828918..1829811 - 297 115351708 - Bamb_1656 - LysR family transcriptional regulator 1653 69.92 0 1829925..1831001 + 358 115351709 - Bamb_1657 - hypothetical protein 1654 68.41 0 1831069..1832850 + 593 115351710 - Bamb_1658 - putative voltage-gated ClC-type chloride channel ClcB 1655 66.99 0 1832912..1833532 - 206 115351711 - Bamb_1659 - TetR family transcriptional regulator 1656 72.34 +1 1833724..1834833 + 369 115351712 - Bamb_1660 - RND family efflux transporter MFP subunit 1657 68.10 0 1834830..1837973 + 1047 115351713 - Bamb_1661 - acriflavin resistance protein 1658 72.75 +1 1837976..1839586 + 536 115351714 - Bamb_1662 - RND efflux system outer membrane lipoprotein 1659 66.86 0 1839711..1840742 + 343 115351715 - Bamb_1663 - MerR family transcriptional regulator 1660 70.34 0 1840800..1841507 - 235 115351716 - Bamb_1664 - hypothetical protein 1661 63.56 0 1841482..1841706 - 74 115351717 - Bamb_1665 - XRE family transcriptional regulator 1662 66.84 0 1841715..1842275 - 186 115351718 - Bamb_1666 - hypothetical protein 1663 65.77 0 1842434..1842991 - 185 115351719 - Bamb_1667 - hypothetical protein 1664 70.24 0 1843034..1844431 - 465 115351720 - Bamb_1668 - sigma-54 dependent trancsriptional regulator 1665 70.34 0 1844696..1845565 + 289 115351721 - Bamb_1669 - beta-lactamase domain-containing protein 1666 72.50 +1 1845594..1847273 + 559 115351722 - Bamb_1670 - hypothetical protein 1667 74.10 +1 1847292..1848098 + 268 115351723 - Bamb_1671 - hypothetical protein 1668 65.57 0 1848203..1849024 - 273 115351724 - Bamb_1672 - binding-protein-dependent transport systems inner membrane component 1669 63.12 0 1849021..1849950 - 309 115351725 - Bamb_1673 - binding-protein-dependent transport systems inner membrane component 1670 65.98 0 1849947..1851107 - 386 115351726 - Bamb_1674 - spermidine/putrescine ABC transporter ATPase subunit 1671 62.74 0 1851194..1852288 - 364 115351727 - Bamb_1675 - extracellular solute-binding protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0