version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1487 65.01 0 1635250..1635672 + 140 115351543 - Bamb_1490 - hypothetical protein 1488 67.63 0 1635728..1636561 - 277 115351544 - Bamb_1491 - ABC transporter 1489 65.44 0 1636568..1637548 - 326 115351545 - Bamb_1492 - lipooligosaccharide transporter ATP-binding subunit 1490 63.25 0 1637818..1638315 + 165 115351546 - Bamb_1493 - UspA domain-containing protein 1491 69.43 0 1638417..1639139 - 240 115351547 - Bamb_1494 - hypothetical protein 1492 67.85 0 1639169..1639507 - 112 115351548 - Bamb_1495 - hypothetical protein 1493 68.21 0 1639534..1640181 - 215 115351549 - Bamb_1496 - LexA repressor 1494 65.03 0 1640446..1641483 + 345 115351550 - Bamb_1497 - sulfate ABC transporter, periplasmic sulfate-binding protein 1495 66.89 0 1641630..1642529 + 299 115351551 - Bamb_1498 - sulfate ABC transporter, inner membrane subunit CysT 1496 68.04 0 1642526..1643473 + 315 115351552 - Bamb_1499 - sulfate ABC transporter, inner membrane subunit CysW 1497 70.63 0 1643487..1644545 + 352 115351553 - Bamb_1500 - sulfate ABC transporter, ATPase subunit 1498 65.59 0 1644625..1645551 + 308 115351554 - Bamb_1501 - transcriptional regulator CysB-like protein 1499 62.50 -1 1645641..1645952 - 103 115351555 - Bamb_1502 - hypothetical protein 1500 65.40 0 1646380..1647330 + 316 115351556 - Bamb_1503 - periplasmic binding protein/LacI transcriptional regulator 1501 69.95 0 1647476..1649089 + 537 115351557 - Bamb_1504 - ABC transporter related 1502 67.94 0 1649086..1650105 + 339 115351558 - Bamb_1505 - inner-membrane translocator 1503 68.80 0 1650142..1651173 + 343 115351559 - Bamb_1506 - LacI family transcription regulator 1504 76.05 +2 1651170..1652096 + 308 115351560 - Bamb_1507 - ribokinase 1505 70.98 0 1652386..1654149 + 587 115351561 - Bamb_1508 - methyl-accepting chemotaxis sensory transducer 1506 54.85 -2 1654264..1654593 + 109 115351562 - Bamb_1509 - hypothetical protein 1507 60.06 -1 1654683..1656605 + 640 115351563 - Bamb_1510 - putative serine protein kinase, PrkA 1508 62.17 -1 1656731..1657999 + 422 115351564 - Bamb_1511 - hypothetical protein 1509 63.04 0 1657996..1659675 + 559 115351565 - Bamb_1512 - hypothetical protein 1510 65.75 0 1659911..1661215 + 434 115351566 - Bamb_1513 - major facilitator superfamily metabolite/H(+) symporter 1511 67.66 0 1661576..1663495 + 639 115351567 - Bamb_1514 - rhomboid family protein 1512 64.95 0 1663676..1664491 + 271 115351568 - Bamb_1515 - extracellular solute-binding protein 1513 69.71 0 1664612..1665334 + 240 115351569 - Bamb_1516 - polar amino acid ABC transporter, inner membrane subunit 1514 69.83 0 1665337..1666062 + 241 115351570 - Bamb_1517 - polar amino acid ABC transporter, inner membrane subunit 1515 69.95 0 1666127..1667404 - 425 115351571 - Bamb_1518 - peptidase M23B 1516 68.06 0 1667734..1668381 - 215 115351572 - Bamb_1519 - TetR family transcriptional regulator 1517 71.46 +1 1668533..1669720 + 395 115351573 - Bamb_1520 - periplasmic multidrug efflux lipoprotein precursor 1518 68.93 0 1669739..1672876 + 1045 115351574 - Bamb_1521 - multidrug efflux protein 1519 72.02 +1 1672876..1674333 + 485 115351575 - Bamb_1522 - RND efflux system outer membrane lipoprotein 1520 64.52 0 1675169..1675681 + 170 115351576 - Bamb_1523 - fimbrial protein 1521 67.35 0 1675770..1678256 + 828 115351577 - Bamb_1524 - fimbrial biogenesis outer membrane usher protein 1522 66.40 0 1678272..1679018 + 248 115351578 - Bamb_1525 - pili assembly chaperone 1523 63.44 0 1679015..1680037 + 340 115351579 - Bamb_1526 - fimbrial protein 1524 64.02 0 1680114..1680302 - 62 115351580 - Bamb_1527 - hypothetical protein 1525 65.08 0 1680302..1680553 - 83 115351581 - Bamb_1528 - hypothetical protein 1526 70.25 0 1680959..1681627 + 222 115351582 - Bamb_1529 - extracytoplasmic-function sigma-70 factor PvdS 1527 71.19 0 1681723..1681965 + 80 115351583 - Bamb_1530 - MbtH domain-containing protein 1528 70.10 0 1682012..1683031 + 339 115351584 - Bamb_1531 - taurine catabolism dioxygenase TauD/TfdA 1529 71.71 +1 1683021..1683872 + 283 115351585 - Bamb_1532 - ABC transporter related 1530 75.12 +1 1683869..1685962 + 697 115351586 - Bamb_1533 - iron-hydroxamate transporter permease subunit 1531 71.04 0 1685959..1686759 + 266 115351587 - Bamb_1534 - ferric iron reductase 1532 70.52 0 1686756..1687793 + 345 115351588 - Bamb_1535 - periplasmic binding protein 1533 70.39 0 1688016..1689761 - 581 115351589 - Bamb_1536 - cyclic peptide transporter 1534 72.79 +1 1690034..1699717 + 3227 115351590 - Bamb_1537 - amino acid adenylation domain-containing protein 1535 72.83 +1 1699727..1704739 + 1670 115351591 - Bamb_1538 - amino acid adenylation domain-containing protein 1536 75.44 +1 1704729..1705754 + 341 115351592 - Bamb_1539 - hypothetical protein 1537 68.63 0 1705789..1707165 + 458 115351593 - Bamb_1540 - lysine/ornithine N-monooxygenase 1538 66.89 0 1707212..1709464 + 750 115351594 - Bamb_1541 - TonB-dependent siderophore receptor 1539 70.24 0 1709551..1710390 + 279 115351595 - Bamb_1542 - folate-dependent phosphoribosylglycinamide formyltransferase PurN-like protein 1540 69.71 0 1710390..1711406 + 338 115351596 - Bamb_1543 - hypothetical protein 1541 64.79 0 1711684..1711950 + 88 115351597 - Bamb_1544 - SpoVT/AbrB domain-containing protein 1542 63.59 0 1711947..1712369 + 140 115351598 - Bamb_1545 - PilT domain-containing protein 1543 55.78 -2 1712450..1712890 - 146 115351599 - Bamb_1546 - dehydratase 1544 60.21 -1 1712983..1714035 + 350 115351600 - Bamb_1547 - IS605 family transposase OrfB 1545 67.88 0 1714323..1715228 - 301 115351601 - Bamb_1548 - hypothetical protein 1546 71.80 +1 1715197..1716267 - 356 115351602 - Bamb_1549 - hypothetical protein 1547 67.78 0 1716622..1717785 + 387 115351603 - Bamb_1550 - amidohydrolase 1548 72.17 +1 1717828..1719135 - 435 115351604 - Bamb_1551 - cobyrinic acid a,c-diamide synthase 1549 66.33 0 1719139..1719741 - 200 115351605 - Bamb_1552 - cob(I)yrinic acid a,c-diamide adenosyltransferase 1550 78.04 +2 1719776..1720153 - 125 115351606 - Bamb_1553 - cobalamin biosynthesis protein CbiG 1551 73.90 +1 1720150..1721034 - 294 115351607 - Bamb_1554 - uroporphyrin-III C-methyltransferase 1552 73.03 +1 1721494..1721886 - 130 115351608 - Bamb_1555 - hypothetical protein 1553 67.77 0 1722040..1723128 + 362 115351609 - Bamb_1556 - cobalamin biosynthesis protein CobW 1554 70.76 0 1723135..1726947 + 1270 115351610 cobN Bamb_1557 - cobaltochelatase 1555 71.69 +1 1726944..1728038 + 364 115351611 - Bamb_1558 - magnesium chelatase 1556 74.55 +1 1728107..1728715 + 202 115351612 - Bamb_1559 - Mg-chelatase subunit ChlD-like protein 1557 68.21 0 1728848..1729300 + 150 115351613 - Bamb_1560 - hypothetical protein 1558 69.28 0 1729434..1730006 + 190 115351614 - Bamb_1561 - hypothetical protein 1559 66.67 0 1730043..1730369 + 108 115351615 - Bamb_1562 - low molecular weight phosphotyrosine protein phosphatase 1560 69.23 0 1730397..1730825 - 142 115351616 - Bamb_1563 - NUDIX hydrolase 1561 72.08 +1 1730988..1731227 - 79 115351617 - Bamb_1564 - hypothetical protein 1562 70.95 0 1731499..1732665 + 388 115351618 - Bamb_1565 - L-carnitine dehydratase/bile acid-inducible protein F 1563 67.67 0 1732784..1734085 + 433 115351619 - Bamb_1566 - CitMHS family citrate/H+ symporter 1564 68.72 0 1734227..1735393 + 388 115351620 - Bamb_1567 - acyl-CoA dehydrogenase domain-containing protein 1565 70.43 0 1735454..1736197 + 247 115351621 - Bamb_1568 - IclR family transcriptional regulator 1566 68.66 0 1736328..1737683 - 451 115351622 - Bamb_1569 - chitinase 1567 57.78 -2 1737781..1738050 - 89 115351623 - Bamb_1570 - hypothetical protein 1568 72.15 +1 1738020..1739807 - 595 115351624 - Bamb_1571 - precorrin-3B C17-methyltransferase 1569 67.89 0 1739804..1740538 - 244 115351625 - Bamb_1572 - precorrin-2 C(20)-methyltransferase 1570 71.45 +1 1740535..1741161 - 208 115351626 cobH Bamb_1573 - precorrin-8X methylmutase 1571 73.99 +1 1741154..1742545 - 463 115351627 - Bamb_1574 - precorrin-3B synthase 1572 75.08 +1 1743048..1744283 + 411 115351628 - Bamb_1575 - precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 1573 71.34 +1 1744280..1745371 + 363 115351629 cbiD Bamb_1576 - cobalt-precorrin-6A synthase 1574 73.68 +1 1745368..1746108 + 246 115351630 - Bamb_1577 - cobalt-precorrin-6x reductase 1575 68.86 0 1746152..1746880 + 242 115351631 - Bamb_1578 - precorrin-4 C11-methyltransferase 1576 71.73 +1 1746922..1748205 - 427 115351632 - Bamb_1579 - major facilitator transporter 1577 70.04 0 1748247..1748780 + 177 115351633 - Bamb_1580 - MarR family transcriptional regulator 1578 65.25 0 1749022..1749726 - 234 115351634 - Bamb_1581 - glutathione S-transferase domain-containing protein 1579 67.38 0 1749933..1751057 - 374 115351635 - Bamb_1582 - porin 1580 73.43 +1 1751322..1754189 - 955 115351636 - Bamb_1583 - ATP-dependent transcription regulator LuxR 1581 73.89 +1 1754297..1755238 + 313 115351637 - Bamb_1584 - hypothetical protein 1582 70.23 0 1755272..1756252 + 326 115351638 - Bamb_1585 - alcohol dehydrogenase 1583 67.73 0 1756263..1757111 + 282 115351639 - Bamb_1586 - taurine dioxygenase 1584 65.91 0 1757228..1758283 + 351 115351640 - Bamb_1587 - hypothetical protein 1585 71.48 +1 1758446..1759774 + 442 115351641 - Bamb_1588 - major facilitator transporter 1586 71.88 +1 1759807..1760382 + 191 115351642 - Bamb_1589 - hypothetical protein 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0