version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1386 65.08 0 1527790..1529616 + 608 115351442 - Bamb_1389 - GTP-binding protein TypA 1387 63.00 0 1529934..1532798 + 954 115351443 kgd Bamb_1390 - alpha-ketoglutarate decarboxylase 1388 65.02 0 1532934..1534211 + 425 115351444 - Bamb_1391 - dihydrolipoamide acetyltransferase 1389 64.50 0 1534293..1535723 + 476 115351445 - Bamb_1392 - dihydrolipoamide dehydrogenase 1390 63.48 0 1535823..1536920 + 365 115351446 - Bamb_1393 - AFG1 family ATPase 1391 63.75 0 1537065..1537475 + 136 115351447 - Bamb_1394 - hypothetical protein 1392 64.50 0 1537575..1538036 - 153 115351448 - Bamb_1395 - hypothetical protein 1393 63.76 0 1538202..1539887 - 561 115351449 - Bamb_1396 - polypeptide-transport-associated domain-containing protein 1394 71.70 +1 1540033..1541304 - 423 115351450 - Bamb_1397 - hypothetical protein 1395 72.73 +1 1541345..1542928 - 527 115351451 - Bamb_1398 - hypothetical protein 1396 55.15 -2 1543592..1543756 + 54 115351452 - Bamb_1399 - Flp/Fap pilin component 1397 60.28 -1 1543837..1544337 + 166 115351453 - Bamb_1400 - peptidase A24A, prepilin type IV 1398 63.27 0 1544334..1544804 + 156 115351454 - Bamb_1401 - TadE family protein 1399 69.76 0 1544893..1545798 + 301 115351455 - Bamb_1402 - CpaB family Flp pilus assembly protein 1400 64.49 0 1545863..1547197 + 444 115351456 - Bamb_1403 - type II and III secretion system protein 1401 67.60 0 1547243..1548523 + 426 115351457 - Bamb_1404 - response regulator receiver protein 1402 64.69 0 1548527..1549891 + 454 115351458 - Bamb_1405 - type II secretion system protein E 1403 67.70 0 1549884..1550852 + 322 115351459 - Bamb_1406 - type II secretion system protein 1404 65.48 0 1550857..1551870 + 337 115351460 - Bamb_1407 - type II secretion system protein 1405 66.44 0 1551895..1552782 + 295 115351461 - Bamb_1408 - TPR repeat-containing protein 1406 63.96 0 1552806..1553138 + 110 115351462 - Bamb_1409 - hypothetical protein 1407 65.27 0 1553150..1555015 + 621 115351463 - Bamb_1410 - membrane protein 1408 65.09 0 1555033..1556424 + 463 115351464 - Bamb_1411 - sigma-54 dependent trancsriptional regulator 1409 66.81 0 1556480..1557187 + 235 115351465 - Bamb_1412 - hypothetical protein 1410 69.71 0 1557271..1557861 - 196 115351466 - Bamb_1413 - RNA chaperone Hfq 1411 64.18 0 1558157..1558438 + 93 115351467 - Bamb_1414 - hypothetical protein 1412 66.34 0 1558466..1559395 - 309 115351468 - Bamb_1415 - hypothetical protein 1413 65.41 0 1559425..1561179 - 584 115351469 - Bamb_1416 - AMP-dependent synthetase and ligase 1414 68.62 0 1561372..1562190 - 272 115351470 - Bamb_1417 - TetR family transcriptional regulator 1415 66.58 0 1562407..1563627 - 406 115351471 - Bamb_1418 - major facilitator transporter 1416 68.88 0 1563919..1564461 + 180 115351472 - Bamb_1419 - GCN5-related N-acetyltransferase 1417 64.43 0 1564601..1565227 + 208 115351473 - Bamb_1420 - hypothetical protein 1418 69.63 0 1565252..1566970 + 572 115351474 - Bamb_1421 - sulphate transporter 1419 72.24 +1 1567010..1567960 - 316 115351475 - Bamb_1422 - ribokinase-like domain-containing protein 1420 64.66 0 1568088..1569032 - 314 115351476 - Bamb_1423 - periplasmic binding protein/LacI transcriptional regulator 1421 68.30 0 1569118..1570155 - 345 115351477 - Bamb_1424 - inner-membrane translocator 1422 68.98 0 1570196..1571749 - 517 115351478 - Bamb_1425 - ABC transporter related 1423 71.23 +1 1571736..1572983 - 415 115351479 - Bamb_1426 - ROK family protein 1424 67.52 0 1574467..1576797 + 776 115351480 - Bamb_1427 - periplasmic sensor signal transduction histidine kinase 1425 64.61 0 1577239..1580157 - 972 115351481 - Bamb_1428 - chitinase 1426 63.38 0 1580467..1581927 + 486 115351482 - Bamb_1429 - N-acetylglucosamine-binding protein A 1427 64.63 0 1582198..1582638 + 146 115351483 - Bamb_1430 - general secretion pathway protein G 1428 65.69 0 1582613..1583125 + 170 115351484 - Bamb_1431 - lytic transglycosylase, catalytic 1429 68.70 0 1583128..1584309 + 393 115351485 - Bamb_1432 - type II secretion system protein 1430 68.81 0 1584364..1585998 + 544 115351486 - Bamb_1433 - type II secretion system protein E 1431 76.17 +2 1585979..1586746 + 255 115351487 - Bamb_1434 - hypothetical protein 1432 67.04 0 1586743..1587273 + 176 115351488 - Bamb_1435 - hypothetical protein 1433 68.11 0 1587270..1587824 + 184 115351489 - Bamb_1436 - hypothetical protein 1434 72.29 +1 1587821..1588300 + 159 115351490 - Bamb_1437 - hypothetical protein 1435 69.00 0 1588332..1590770 + 812 115351491 - Bamb_1438 - type II and III secretion system protein 1436 67.29 0 1590767..1591249 + 160 115351492 - Bamb_1439 - general secretion pathway GspG related transmembrane protein 1437 68.18 0 1591224..1591619 + 131 115351493 - Bamb_1440 - type II secretion system protein G 1438 70.19 0 1591606..1592145 + 179 115351494 - Bamb_1441 - hypothetical protein 1439 63.89 0 1592159..1592842 + 227 115351495 - Bamb_1442 - two component transcriptional regulator 1440 70.21 0 1592855..1593193 + 112 115351496 - Bamb_1443 - hypothetical protein 1441 59.96 -1 1593282..1593833 + 183 115351497 - Bamb_1444 - cytochrome B561 1442 59.62 -1 1594070..1594594 + 174 115351498 - Bamb_1445 - HMG-I and HMG-Y, DNA-binding domain-containing protein 1443 57.95 -2 1594594..1595430 + 278 115351499 - Bamb_1446 - integrase catalytic subunit 1444 67.28 0 1595979..1598432 + 817 115351500 - Bamb_1447 - ribonuclease R 1445 68.95 0 1598584..1599327 + 247 115351501 - Bamb_1448 - RNA methyltransferase 1446 67.55 0 1599411..1600313 + 300 115351502 - Bamb_1449 - N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 1447 66.81 0 1600417..1601109 + 230 115351503 - Bamb_1450 - ribose-5-phosphate isomerase A 1448 64.57 0 1601393..1602109 + 238 115351504 - Bamb_1451 - GntR domain-containing protein 1449 69.30 0 1602211..1603197 + 328 115351505 - Bamb_1452 - oxidoreductase domain-containing protein 1450 65.13 0 1603253..1604032 - 259 115351506 - Bamb_1453 - polar amino acid ABC transporter, inner membrane subunit 1451 64.53 0 1604068..1604862 - 264 115351507 - Bamb_1454 - extracellular solute-binding protein 1452 68.35 0 1604963..1606033 - 356 115351508 - Bamb_1455 - dihydroorotate dehydrogenase 2 1453 65.70 0 1606180..1607010 - 276 115351509 - Bamb_1456 - arginyl-tRNA-protein transferase 1454 70.33 0 1607044..1607808 - 254 115351510 aat Bamb_1457 - leucyl/phenylalanyl-tRNA--protein transferase 1455 65.16 0 1607820..1608416 - 198 115351511 - Bamb_1458 - NUDIX hydrolase 1456 69.68 0 1608841..1609338 + 165 115351512 - Bamb_1459 - hypothetical protein 1457 66.96 0 1609342..1609680 + 112 115351513 - Bamb_1460 - small multidrug resistance protein 1458 69.07 0 1609703..1610866 + 387 115351514 - Bamb_1461 - enoyl-CoA hydratase 1459 67.80 0 1610986..1611426 - 146 115351515 - Bamb_1462 - hypothetical protein 1460 68.31 0 1611756..1612913 + 385 115351516 - Bamb_1463 - alkanesulfonate monooxygenase 1461 65.81 0 1612928..1613740 + 270 115351517 - Bamb_1464 - binding-protein-dependent transport systems inner membrane component 1462 72.92 +1 1613737..1614696 + 319 115351518 - Bamb_1465 - ABC transporter related 1463 61.57 -1 1614754..1614969 + 71 115351519 - Bamb_1466 - molybdenum-pterin binding 1464 60.61 -1 1615109..1615306 + 65 115351520 - Bamb_1467 - hypothetical protein 1465 68.63 0 1615362..1615616 + 84 115351521 - Bamb_1468 - hypothetical protein 1466 63.96 0 1615694..1616728 + 344 115351522 - Bamb_1469 - tRNA-dihydrouridine synthase A 1467 58.62 -1 1617105..1618235 - 376 115351523 - Bamb_1470 - acyltransferase 3 1468 57.97 -2 1618423..1619457 - 344 115351524 - Bamb_1471 - FkbM family methyltransferase 1469 63.58 0 1619925..1620443 + 172 115351525 - Bamb_1472 - GCN5-related N-acetyltransferase 1470 65.59 0 1620516..1620980 - 154 115351526 - Bamb_1473 - hypothetical protein 1471 63.84 0 1621665..1622408 - 247 115351527 - Bamb_1474 - hypothetical protein 1472 64.40 0 1622618..1622926 + 102 115351528 - Bamb_1475 - hypothetical protein 1473 65.49 0 1622964..1623218 + 84 115351529 - Bamb_1476 - hypothetical protein 1474 67.74 0 1623215..1623775 + 186 115351530 - Bamb_1477 - hypothetical protein 1475 66.88 0 1623939..1624412 + 157 115351531 - Bamb_1478 - glyoxalase/bleomycin resistance protein/dioxygenase 1476 70.52 0 1624346..1624993 - 215 115351532 - Bamb_1479 - hypothetical protein 1477 59.57 -1 1625017..1625298 + 93 115351533 - Bamb_1480 - hypothetical protein 1478 65.54 0 1625470..1626093 - 207 115351534 - Bamb_1481 - phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthase-like protein 1479 67.08 0 1626539..1627021 - 160 115351535 - Bamb_1482 - HxlR family transcriptional regulator 1480 66.67 0 1627131..1627628 + 165 115351536 - Bamb_1483 - hypothetical protein 1481 66.38 0 1627830..1628882 + 350 115351537 - Bamb_1484 - aldo/keto reductase 1482 66.90 0 1628967..1630253 - 428 115351538 - Bamb_1485 - major facilitator transporter 1483 73.21 +1 1630289..1631710 - 473 115351539 - Bamb_1486 - hypothetical protein 1484 70.44 0 1631872..1632825 + 317 115351540 - Bamb_1487 - LysR family transcriptional regulator 1485 66.58 0 1632890..1634017 + 375 115351541 - Bamb_1488 - tRNA 2-selenouridine synthase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0