version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 83 66.93 0 93981..94739 + 252 115350139 - Bamb_0083 - ABC transporter related 84 64.64 0 95245..97215 + 656 115350140 - Bamb_0084 - tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 85 61.72 -1 97212..97898 + 228 115350141 - Bamb_0085 - methyltransferase GidB 86 63.46 0 97950..98729 + 259 115350142 - Bamb_0086 - cobyrinic acid a,c-diamide synthase 87 66.67 0 98737..99654 + 305 115350143 - Bamb_0087 - parB-like partition proteins 88 66.75 0 99665..100798 + 377 115350144 - Bamb_0088 - citrate transporter 89 58.28 -2 100817..101305 + 162 115350145 - Bamb_0089 - hypothetical protein 90 65.56 0 101356..101898 + 180 115350146 - Bamb_0090 - F0F1-type ATP synthase subunit I-like protein 91 60.90 -1 102009..102857 + 282 115350147 - Bamb_0091 - F0F1 ATP synthase subunit A 92 58.89 -1 102933..103202 + 89 115350148 - Bamb_0092 - F0F1 ATP synthase subunit C 93 63.48 0 103331..103801 + 156 115350149 - Bamb_0093 - F0F1 ATP synthase subunit B 94 65.00 0 103804..104343 + 179 115350150 - Bamb_0094 - F0F1 ATP synthase subunit delta 95 63.16 0 104388..105929 + 513 115350151 - Bamb_0095 - F0F1 ATP synthase subunit alpha 96 62.21 -1 105999..106874 + 291 115350152 - Bamb_0096 - F0F1 ATP synthase subunit gamma 97 61.36 -1 106941..108335 + 464 115350153 - Bamb_0097 - F0F1 ATP synthase subunit beta 98 65.26 0 108580..109005 + 141 115350154 atpC Bamb_0098 - F0F1 ATP synthase subunit epsilon 99 66.78 0 109263..110990 + 575 115350155 - Bamb_0099 - acyl-CoA synthetase 100 65.44 0 111705..112517 - 270 115350156 - Bamb_0100 - prephenate dehydratase 101 69.30 0 112583..113761 + 392 115350157 hemE Bamb_0101 - uroporphyrinogen decarboxylase 102 72.41 +1 114210..116471 + 753 115350158 - Bamb_0102 - primosome assembly protein PriA 103 69.95 0 116822..120754 + 1310 115350159 putA Bamb_0103 - trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 104 63.86 0 120839..121978 + 379 115350160 - Bamb_0104 - extracellular ligand-binding receptor 105 62.33 -1 122160..122828 - 222 115350161 - Bamb_0105 - (Acyl-carrier-protein) phosphodiesterase 106 68.08 0 122942..123793 + 283 115350162 - Bamb_0106 - LysR family transcriptional regulator 107 71.63 +1 123828..125480 - 550 115350163 - Bamb_0107 - acyl-CoA dehydrogenase domain-containing protein 108 73.24 +1 125600..126268 + 222 115350164 - Bamb_0108 - TetR family transcriptional regulator 109 67.62 0 126501..127655 + 384 115350165 - Bamb_0109 - putative aminotransferase 110 66.90 0 127715..128560 + 281 115350166 - Bamb_0110 - extracellular solute-binding protein 111 70.18 0 128572..129993 + 473 115350167 - Bamb_0111 - FAD linked oxidase domain-containing protein 112 69.11 0 130020..130592 - 190 115350168 - Bamb_0112 - PadR-like family transcriptional regulator 113 65.74 0 130661..131092 - 143 115350169 - Bamb_0113 - MerR family transcriptional regulator 114 70.59 0 131738..133852 + 704 115350170 - Bamb_0114 - heavy metal translocating P-type ATPase 115 73.70 +1 133863..134246 + 127 115350171 - Bamb_0115 - hypothetical protein 116 67.71 0 134492..134971 - 159 115350172 - Bamb_0116 - transcription activator, effector binding 117 67.96 0 135390..136853 + 487 115350173 - Bamb_0117 - TM helix repeat-containing protein 118 67.02 0 137066..138478 + 470 115350174 - Bamb_0118 - ethanolamine transproter 119 68.38 0 138590..139987 + 465 115350175 - Bamb_0119 - ethanolamine ammonia lyase large subunit 120 73.33 +1 139984..140778 + 264 115350176 - Bamb_0120 - ethanolamine ammonia-lyase small subunit 121 68.69 0 140809..141699 - 296 115350177 - Bamb_0121 - LysR family transcriptional regulator 122 74.15 +1 141848..143464 + 538 115350178 - Bamb_0122 - major facilitator transporter 123 68.07 0 143663..144091 - 142 115350179 - Bamb_0123 - pyridoxamine 5'-phosphate oxidase-related, FMN-binding 124 65.88 0 144409..145935 + 508 115350180 - Bamb_0124 - aldehyde dehydrogenase 125 71.25 +1 146231..146776 + 181 115350181 - Bamb_0125 - hypothetical protein 126 72.66 +1 146962..147996 + 344 115350182 - Bamb_0126 - AraC family transcriptional regulator 127 72.24 +1 148060..149154 - 364 115350183 - Bamb_0127 - hypothetical protein 128 71.42 +1 149151..150854 - 567 115350184 - Bamb_0128 - acetolactate synthase 2 catalytic subunit 129 69.04 0 151019..152407 - 462 115350185 - Bamb_0129 - L-serine dehydratase 1 130 69.83 0 152438..153574 - 378 115350186 - Bamb_0130 - hypothetical protein 131 69.13 0 153727..156654 - 975 115350187 - Bamb_0131 - glycine dehydrogenase 132 63.42 0 156720..157181 - 153 115350188 - Bamb_0132 - glycine cleavage system H protein 133 67.46 0 157215..158348 - 377 115350189 gcvT Bamb_0133 - glycine cleavage system aminomethyltransferase T 134 70.19 0 158800..159168 - 122 115350190 - Bamb_0134 - hypothetical protein 135 70.47 0 159394..160446 - 350 115350191 - Bamb_0135 - oxidoreductase domain-containing protein 136 76.90 +2 160670..161392 - 240 115350192 - Bamb_0136 - hypothetical protein 137 65.61 0 161674..163761 + 695 115350193 - Bamb_0137 - UvrD/REP helicase 138 68.87 0 163850..164758 - 302 115350194 - Bamb_0138 - cytochrome c, class I 139 60.70 -1 165180..165464 - 94 115350195 - Bamb_0139 - XRE family transcriptional regulator 140 55.24 -2 165457..165771 - 104 115350196 - Bamb_0140 - hypothetical protein 141 70.89 0 165992..167578 + 528 115350197 - Bamb_0141 - hypothetical protein 142 71.76 +1 167606..170392 - 928 115350198 - Bamb_0142 - hypothetical protein 143 67.74 0 170389..171597 - 402 115350199 - Bamb_0143 - TDP-4-oxo-6-deoxy-D-glucose transaminase 144 67.74 0 171659..172309 - 216 115350200 - Bamb_0144 - SAM-binding motif-containing protein 145 66.67 0 172320..173027 - 235 115350201 - Bamb_0145 - hypothetical protein 146 69.05 0 173033..174418 - 461 115350202 - Bamb_0146 - FAD dependent oxidoreductase 147 66.79 0 174415..175200 - 261 115350203 - Bamb_0147 - hypothetical protein 148 69.35 0 175541..177400 + 619 115350204 - Bamb_0148 - TPR repeat-containing protein 149 65.92 0 177397..178338 + 313 115350205 - Bamb_0149 - NAD-dependent epimerase/dehydratase 150 69.24 0 178335..179540 + 401 115350206 - Bamb_0150 - putative methyltransferase 151 69.86 0 179553..182054 + 833 115350207 - Bamb_0151 - TPR repeat-containing protein 152 68.36 0 182051..184537 + 828 115350208 - Bamb_0152 - TPR repeat-containing protein 153 70.02 0 184534..186798 + 754 115350209 - Bamb_0153 - TPR repeat-containing protein 154 67.68 0 186944..187240 - 98 115350210 - Bamb_0154 - hypothetical protein 155 66.18 0 187276..188703 - 475 115350211 - Bamb_0155 - flagellar hook-associated 2 domain-containing protein 156 63.27 0 188891..189715 - 274 115350212 - Bamb_0156 - flagellin 157 57.28 -2 190257..190469 + 70 115350213 - Bamb_0157 - 30S ribosomal protein S21 158 64.85 0 190724..191329 - 201 115350214 - Bamb_0158 - DNA-3-methyladenine glycosylase I 159 75.28 +1 191471..192352 + 293 115350215 - Bamb_0159 - ATPase, BadF/BadG/BcrA/BcrD type 160 67.12 0 192601..193476 + 291 115350216 - Bamb_0160 - Cof-like hydrolase 161 67.34 0 193582..194322 - 246 115350217 - Bamb_0161 - aquaporin Z 162 62.63 -1 194621..194917 + 98 115350218 - Bamb_0162 - histone family protein nucleoid-structuring protein H-NS 163 67.04 0 195021..196085 - 354 115350219 - Bamb_0163 - glycosyl transferase, group 1 164 63.86 0 196752..197072 + 106 115350220 - Bamb_0164 - transcriptional activator FlhD 165 65.59 0 197168..197722 + 184 115350221 - Bamb_0165 - transcriptional activator FlhC 166 64.46 0 197902..198762 + 286 115350222 - Bamb_0166 - flagellar motor protein MotA 167 67.55 0 198776..199795 + 339 115350223 motB Bamb_0167 - flagellar motor protein MotB 168 69.58 0 199975..200352 + 125 115350224 - Bamb_0168 - response regulator receiver protein 169 69.84 0 200386..202620 + 744 115350225 - Bamb_0169 - CheA signal transduction histidine kinases 170 63.95 0 202669..203184 + 171 115350226 - Bamb_0170 - CheW protein 171 71.39 +1 203222..205168 + 648 115350227 - Bamb_0171 - methyl-accepting chemotaxis sensory transducer 172 68.81 0 205172..206149 + 325 115350228 - Bamb_0172 - MCP methyltransferase, CheR-type 173 70.60 0 206146..206907 + 253 115350229 - Bamb_0173 - chemoreceptor glutamine deamidase CheD 174 70.27 0 206913..207995 + 360 115350230 - Bamb_0174 - chemotaxis-specific methylesterase 175 64.39 0 208063..208458 + 131 115350231 - Bamb_0175 - response regulator receiver protein 176 69.67 0 208460..209191 + 243 115350232 - Bamb_0176 - chemotaxis regulator CheZ 177 74.40 +1 209489..209992 + 167 115350233 - Bamb_0177 - hypothetical protein 178 66.75 0 210009..211238 + 409 115350234 - Bamb_0178 - hypothetical protein 179 68.07 0 211406..211903 + 165 115350235 - Bamb_0179 - 3-demethylubiquinone-9 3-methyltransferase 180 65.09 0 212268..212648 + 126 115350236 - Bamb_0180 - hypothetical protein 181 69.58 0 212915..214114 + 399 115350237 flhB Bamb_0181 - flagellar biosynthesis protein FlhB 182 67.90 0 214111..216213 + 700 115350238 flhA Bamb_0182 - flagellar biosynthesis protein FlhA 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.