version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1241 67.44 0 1358566..1359864 + 432 115351297 - Bamb_1244 - CitMHS family citrate/H+ symporter 1242 72.91 +1 1359901..1361262 + 453 115351298 - Bamb_1245 - hypothetical protein 1243 69.55 0 1361262..1361573 + 103 115351299 - Bamb_1246 - hypothetical protein 1244 69.78 0 1361857..1363686 + 609 115351300 - Bamb_1247 - methyl-accepting chemotaxis sensory transducer 1245 68.73 0 1363809..1364582 + 257 115351301 - Bamb_1248 - hypothetical protein 1246 67.76 0 1364616..1365440 + 274 115351302 - Bamb_1249 - hypothetical protein 1247 65.70 0 1365500..1366429 - 309 115351303 - Bamb_1250 - phosphatidate cytidylyltransferase 1248 67.14 0 1366466..1367098 - 210 115351304 - Bamb_1251 - phospholipid/glycerol acyltransferase 1249 70.63 0 1367549..1368154 + 201 115351305 - Bamb_1252 - CDP-alcohol phosphatidyltransferase 1250 70.83 0 1368193..1369992 + 599 115351306 - Bamb_1253 - alpha/beta hydrolase fold 1251 73.08 +1 1369989..1371392 + 467 115351307 - Bamb_1254 - dual specificity protein phosphatase 1252 75.72 +2 1371392..1371844 + 150 115351308 - Bamb_1255 - hypothetical protein 1253 69.41 0 1371891..1372145 - 84 115351309 - Bamb_1256 - diguanylate cyclase 1254 63.05 0 1372236..1372622 - 128 115351310 - Bamb_1257 - hypothetical protein 1255 72.41 +1 1372740..1375055 + 771 115351311 - Bamb_1258 - cellulose synthase regulator protein 1256 74.61 +1 1375059..1376279 + 406 115351312 - Bamb_1259 - endo-1,4-D-glucanase 1257 74.29 +1 1376276..1380223 + 1315 115351313 - Bamb_1260 - cellulose synthase domain-containing protein 1258 73.93 +1 1380237..1382204 + 655 115351314 - Bamb_1261 - hypothetical protein 1259 74.27 +1 1382407..1383195 + 262 115351315 - Bamb_1262 - ATPases involved in chromosome partitioning-like protein 1260 70.29 0 1383192..1385729 + 845 115351316 - Bamb_1263 - cellulose synthase (UDP-forming) 1261 68.40 0 1385757..1387310 + 517 115351317 - Bamb_1264 - hypothetical protein 1262 67.76 0 1387307..1387489 + 60 115351318 - Bamb_1265 - hypothetical protein 1263 70.62 0 1387556..1388440 - 294 115351319 - Bamb_1266 - pirin domain-containing protein 1264 67.68 0 1388465..1388857 - 130 115351320 - Bamb_1267 - OsmC family protein 1265 71.09 0 1388907..1390487 - 526 115351321 - Bamb_1268 - sodium/hydrogen exchanger 1266 71.26 +1 1390513..1390773 - 86 115351322 - Bamb_1269 - hypothetical protein 1267 63.76 0 1391048..1391734 + 228 115351323 - Bamb_1270 - isochorismatase hydrolase 1268 67.90 0 1391814..1392788 - 324 115351324 - Bamb_1271 - LysR family transcriptional regulator 1269 66.67 0 1392839..1393006 + 55 115351325 - Bamb_1272 - hypothetical protein 1270 68.15 0 1393026..1394918 + 630 115351326 - Bamb_1273 - amidohydrolase 3 1271 66.89 0 1394920..1395366 + 148 115351327 - Bamb_1274 - DoxX family protein 1272 66.99 0 1395420..1396334 + 304 115351328 - Bamb_1275 - hypothetical protein 1273 71.55 +1 1396331..1397026 + 231 115351329 - Bamb_1276 - hypothetical protein 1274 67.38 0 1397023..1398567 + 514 115351330 - Bamb_1277 - hypothetical protein 1275 67.04 0 1398671..1400272 - 533 115351331 - Bamb_1278 - phosphoesterase 1276 68.37 0 1400458..1401867 + 469 115351332 - Bamb_1279 - di-haem cytochrome c peroxidase 1277 65.89 0 1401995..1402381 + 128 115351333 - Bamb_1280 - hypothetical protein 1278 69.43 0 1402392..1402862 + 156 115351334 - Bamb_1281 - NUDIX hydrolase 1279 64.68 0 1402975..1404684 - 569 115351335 - Bamb_1282 - glutaminyl-tRNA synthetase 1280 70.48 0 1404938..1405147 + 69 115351336 - Bamb_1283 - putative osmosis-related lipoprotein 1281 74.32 +1 1405310..1405858 + 182 115351337 - Bamb_1284 - hypothetical protein 1282 69.09 0 1405932..1407212 - 426 115351338 - Bamb_1285 - L-carnitine dehydratase/bile acid-inducible protein F 1283 66.70 0 1407381..1410005 + 874 115351339 alaS Bamb_1286 - alanyl-tRNA synthetase 1284 51.03 -2 1410228..1410470 + 80 115351340 - Bamb_1287 - hypothetical protein 1285 67.75 0 1410611..1412362 + 583 115351341 - Bamb_1288 - polypeptide-transport-associated domain-containing protein 1286 68.09 0 1412359..1415316 + 985 115351342 - Bamb_1289 - filamentous haemagglutinin outer membrane protein 1287 72.47 +1 1415502..1416431 - 309 115351343 - Bamb_1290 - LysR family transcriptional regulator 1288 75.14 +1 1416556..1417782 + 408 115351344 - Bamb_1291 - hypothetical protein 1289 69.09 0 1417902..1418438 + 178 115351345 - Bamb_1292 - NUDIX hydrolase 1290 67.35 0 1418558..1418995 + 145 115351346 - Bamb_1293 - thioesterase superfamily protein 1291 72.61 +1 1419006..1419947 + 313 115351347 - Bamb_1294 - inner-membrane translocator 1292 75.22 +1 1419940..1421166 + 408 115351348 - Bamb_1295 - inner-membrane translocator 1293 73.47 +1 1421163..1421912 + 249 115351349 - Bamb_1296 - ABC transporter related 1294 75.32 +1 1421909..1422613 + 234 115351350 - Bamb_1297 - ABC transporter related 1295 67.47 0 1422777..1423523 + 248 115351351 - Bamb_1298 - short-chain dehydrogenase/reductase SDR 1296 71.10 0 1423546..1424064 - 172 115351352 - Bamb_1299 - hypothetical protein 1297 68.13 0 1424157..1424975 - 272 115351353 - Bamb_1300 - myo-inositol catabolism IolB domain-containing protein 1298 66.45 0 1425019..1425948 - 309 115351354 - Bamb_1301 - xylose isomerase domain-containing protein 1299 71.39 +1 1426010..1427893 - 627 115351355 - Bamb_1302 - thiamine pyrophosphate binding domain-containing protein 1300 70.81 0 1427940..1429895 - 651 115351356 - Bamb_1303 - ribokinase-like domain-containing protein 1301 65.38 0 1430213..1431148 + 311 115351357 - Bamb_1304 - periplasmic binding protein/LacI transcriptional regulator 1302 66.98 0 1431217..1432791 + 524 115351358 - Bamb_1305 - ABC transporter related 1303 67.06 0 1432818..1433843 + 341 115351359 - Bamb_1306 - inner-membrane translocator 1304 68.09 0 1433881..1434795 + 304 115351360 - Bamb_1307 - xylose isomerase domain-containing protein 1305 68.64 0 1434859..1435872 + 337 115351361 - Bamb_1308 - inositol 2-dehydrogenase 1306 69.15 0 1435931..1436857 + 308 115351362 - Bamb_1309 - xylose isomerase domain-containing protein 1307 67.43 0 1436921..1438093 + 390 115351363 - Bamb_1310 - oxidoreductase domain-containing protein 1308 67.68 0 1438365..1439249 + 294 115351364 - Bamb_1311 - RpiR family transcriptional regulator 1309 69.56 0 1439305..1440825 - 506 115351365 - Bamb_1312 - methylmalonate-semialdehyde dehydrogenase 1310 72.01 +1 1440934..1441869 + 311 115351366 - Bamb_1313 - LysR family transcriptional regulator 1311 62.28 -1 1442001..1442228 + 75 115351367 - Bamb_1314 - SirA family protein 1312 72.56 +1 1442453..1442842 + 129 115351368 - Bamb_1315 - hypothetical protein 1313 64.26 0 1443189..1443893 + 234 115351369 - Bamb_1316 - two component transcriptional regulator 1314 71.51 +1 1443890..1445251 + 453 115351370 - Bamb_1317 - peptidoglycan-binding LysM 1315 70.48 0 1445262..1447649 + 795 115351371 - Bamb_1318 - periplasmic sensor signal transduction histidine kinase 1316 71.71 +1 1447687..1448301 + 204 115351372 - Bamb_1319 - hypothetical protein 1317 65.54 0 1448362..1449246 - 294 115351373 - Bamb_1320 - UTP-glucose-1-phosphate uridylyltransferase 1318 66.42 0 1449334..1452201 - 955 115351374 valS Bamb_1321 - valyl-tRNA synthetase 1319 67.70 0 1452257..1454779 + 840 115351375 - Bamb_1322 - UvrD/REP helicase 1320 69.64 0 1454779..1455585 + 268 115351376 - Bamb_1323 - 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1321 57.97 -2 1455740..1456222 + 160 115351377 - Bamb_1324 - hypothetical protein 1322 59.78 -1 1456219..1456494 + 91 115351378 - Bamb_1325 - hypothetical protein 1323 67.31 0 1456564..1457802 - 412 115351379 - Bamb_1326 - major facilitator transporter 1324 71.02 0 1458198..1459874 + 558 115351380 - Bamb_1327 - methyl-accepting chemotaxis sensory transducer 1325 67.12 0 1459893..1460771 - 292 115351381 - Bamb_1328 - secretion protein HlyD family protein 1326 61.76 -1 1460784..1460987 - 67 115351382 - Bamb_1329 - hypothetical protein 1327 69.66 0 1460984..1463185 - 733 115351383 - Bamb_1330 - fusaric acid resistance protein region 1328 72.55 +1 1463201..1464832 - 543 115351384 - Bamb_1331 - RND efflux system outer membrane lipoprotein 1329 67.41 0 1464990..1465931 + 313 115351385 - Bamb_1332 - LysR family transcriptional regulator 1330 66.67 0 1466272..1467099 - 275 115351386 - Bamb_1333 - metallophosphoesterase 1331 69.48 0 1467125..1468546 - 473 115351387 - Bamb_1334 - FAD linked oxidase domain-containing protein 1332 72.82 +1 1468567..1468956 - 129 115351388 - Bamb_1335 - membrane protein-like protein 1333 71.18 0 1468953..1469573 - 206 115351389 - Bamb_1336 - flavodoxin/nitric oxide synthase 1334 67.72 0 1469718..1471049 + 443 115351390 - Bamb_1337 - putative ribonuclease BN 1335 63.24 0 1471068..1471271 - 67 115351391 - Bamb_1338 - membrane protein 1336 60.96 -1 1471543..1471998 + 151 115351392 - Bamb_1339 - XRE family transcriptional regulator 1337 66.30 0 1472141..1474075 + 644 115351393 - Bamb_1340 - phospholipid/glycerol acyltransferase 1338 68.57 0 1474273..1475373 + 366 115351394 - Bamb_1341 - chorismate synthase 1339 70.19 0 1475443..1476519 - 358 115351395 - Bamb_1342 - LacI family transcription regulator 1340 71.51 +1 1476758..1477687 + 309 115351396 - Bamb_1343 - ribokinase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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