version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1195 70.90 0 1313105..1313293 + 62 115351251 - Bamb_1198 - hypothetical protein 1196 71.19 0 1313313..1314683 - 456 115351252 - Bamb_1199 - MATE efflux family protein 1197 68.92 0 1314694..1315092 - 132 115351253 - Bamb_1200 - hypothetical protein 1198 70.31 0 1315099..1316718 - 539 115351254 - Bamb_1201 - AMP-dependent synthetase and ligase 1199 68.69 0 1317095..1317787 - 230 115351255 - Bamb_1202 - peptidase M23B 1200 69.68 0 1317908..1318870 - 320 115351256 - Bamb_1203 - aldose 1-epimerase 1201 64.62 0 1319308..1320138 + 276 115351257 - Bamb_1204 - undecaprenyl pyrophosphate phosphatase 1202 61.90 -1 1320695..1321114 + 139 115351258 - Bamb_1205 - putative TIS1421-transposase orfA protein 1203 58.84 -1 1321836..1322666 - 276 115351259 - Bamb_1206 - exonuclease, RNase T and DNA polymerase III 1204 62.12 -1 1322828..1323157 + 109 115351260 - Bamb_1207 - hypothetical protein 1205 60.13 -1 1323499..1324263 - 254 115351261 - Bamb_1208 - hypothetical protein 1206 59.04 -1 1324767..1325015 - 82 115351262 - Bamb_1209 - hypothetical protein 1207 66.20 0 1325495..1326133 + 212 115351263 - Bamb_1210 - hypothetical protein 1208 62.16 -1 1326218..1326550 + 110 115351264 - Bamb_1211 - hypothetical protein 1209 66.94 0 1326750..1327118 + 122 115351265 - Bamb_1212 - hypothetical protein 1210 67.90 0 1327317..1327640 + 107 115351266 - Bamb_1213 - hypothetical protein 1211 60.63 -1 1327719..1328546 - 275 115351267 - Bamb_1214 - cyclic nucleotide-binding protein 1212 63.08 0 1328798..1329355 + 185 115351268 - Bamb_1215 - ECF subfamily RNA polymerase sigma-24 factor 1213 66.67 0 1329470..1329787 + 105 115351269 - Bamb_1216 - hypothetical protein 1214 68.77 0 1329817..1330434 + 205 115351270 - Bamb_1217 - hypothetical protein 1215 63.76 0 1330813..1331259 + 148 115351271 - Bamb_1218 - hypothetical protein 1216 59.06 -1 1331368..1331709 - 113 115351272 - Bamb_1219 - hypothetical protein 1217 61.15 -1 1331764..1332162 - 132 115351273 - Bamb_1220 - hypothetical protein 1218 64.63 0 1332159..1333682 - 507 115351274 - Bamb_1221 - Altronate dehydratase 1219 65.03 0 1333679..1334839 - 386 115351275 - Bamb_1222 - mannitol dehydrogenase domain-containing protein 1220 62.90 0 1334864..1335871 - 335 115351276 - Bamb_1223 - alcohol dehydrogenase 1221 65.06 0 1335885..1336757 - 290 115351277 - Bamb_1224 - amidohydrolase 2 1222 65.39 0 1336754..1337770 - 338 115351278 - Bamb_1225 - aldo/keto reductase 1223 62.34 -1 1337837..1338784 - 315 115351279 - Bamb_1226 - periplasmic binding protein/LacI transcriptional regulator 1224 64.95 0 1338824..1339873 - 349 115351280 - Bamb_1227 - inner-membrane translocator 1225 64.03 0 1339848..1341401 - 517 115351281 - Bamb_1228 - ABC transporter related 1226 66.80 0 1341596..1342345 + 249 115351282 - Bamb_1229 - GntR domain-containing protein 1227 65.64 0 1342335..1342724 + 129 115351283 - Bamb_1230 - hypothetical protein 1228 66.45 0 1342728..1343189 + 153 115351284 - Bamb_1231 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 1229 70.24 0 1343186..1345510 + 774 115351285 - Bamb_1232 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1230 69.56 0 1345955..1347784 + 609 115351286 - Bamb_1233 - acyl-CoA dehydrogenase domain-containing protein 1231 71.97 +1 1347911..1348891 + 326 115351287 - Bamb_1234 - alcohol dehydrogenase 1232 68.20 0 1349066..1350436 - 456 115351288 - Bamb_1235 - periplasmic sensor signal transduction histidine kinase 1233 68.04 0 1350437..1351162 - 241 115351289 - Bamb_1236 - two component transcriptional regulator 1234 68.81 0 1351409..1352155 + 248 115351290 - Bamb_1237 - MltA-interacting MipA family protein 1235 70.98 0 1352495..1352749 + 84 115351291 - Bamb_1238 - hypothetical protein 1236 68.72 0 1352823..1354037 - 404 115351292 - Bamb_1239 - lytic transglycosylase, catalytic 1237 67.61 0 1354478..1355638 - 386 115351293 - Bamb_1240 - porin 1238 71.65 +1 1356034..1356816 + 260 115351294 - Bamb_1241 - hypothetical protein 1239 67.70 0 1356938..1357516 + 192 115351295 - Bamb_1242 - flavin reductase domain-containing protein 1240 71.91 +1 1357572..1358468 - 298 115351296 - Bamb_1243 - LysR family transcriptional regulator 1241 67.44 0 1358566..1359864 + 432 115351297 - Bamb_1244 - CitMHS family citrate/H+ symporter 1242 72.91 +1 1359901..1361262 + 453 115351298 - Bamb_1245 - hypothetical protein 1243 69.55 0 1361262..1361573 + 103 115351299 - Bamb_1246 - hypothetical protein 1244 69.78 0 1361857..1363686 + 609 115351300 - Bamb_1247 - methyl-accepting chemotaxis sensory transducer 1245 68.73 0 1363809..1364582 + 257 115351301 - Bamb_1248 - hypothetical protein 1246 67.76 0 1364616..1365440 + 274 115351302 - Bamb_1249 - hypothetical protein 1247 65.70 0 1365500..1366429 - 309 115351303 - Bamb_1250 - phosphatidate cytidylyltransferase 1248 67.14 0 1366466..1367098 - 210 115351304 - Bamb_1251 - phospholipid/glycerol acyltransferase 1249 70.63 0 1367549..1368154 + 201 115351305 - Bamb_1252 - CDP-alcohol phosphatidyltransferase 1250 70.83 0 1368193..1369992 + 599 115351306 - Bamb_1253 - alpha/beta hydrolase fold 1251 73.08 +1 1369989..1371392 + 467 115351307 - Bamb_1254 - dual specificity protein phosphatase 1252 75.72 +2 1371392..1371844 + 150 115351308 - Bamb_1255 - hypothetical protein 1253 69.41 0 1371891..1372145 - 84 115351309 - Bamb_1256 - diguanylate cyclase 1254 63.05 0 1372236..1372622 - 128 115351310 - Bamb_1257 - hypothetical protein 1255 72.41 +1 1372740..1375055 + 771 115351311 - Bamb_1258 - cellulose synthase regulator protein 1256 74.61 +1 1375059..1376279 + 406 115351312 - Bamb_1259 - endo-1,4-D-glucanase 1257 74.29 +1 1376276..1380223 + 1315 115351313 - Bamb_1260 - cellulose synthase domain-containing protein 1258 73.93 +1 1380237..1382204 + 655 115351314 - Bamb_1261 - hypothetical protein 1259 74.27 +1 1382407..1383195 + 262 115351315 - Bamb_1262 - ATPases involved in chromosome partitioning-like protein 1260 70.29 0 1383192..1385729 + 845 115351316 - Bamb_1263 - cellulose synthase (UDP-forming) 1261 68.40 0 1385757..1387310 + 517 115351317 - Bamb_1264 - hypothetical protein 1262 67.76 0 1387307..1387489 + 60 115351318 - Bamb_1265 - hypothetical protein 1263 70.62 0 1387556..1388440 - 294 115351319 - Bamb_1266 - pirin domain-containing protein 1264 67.68 0 1388465..1388857 - 130 115351320 - Bamb_1267 - OsmC family protein 1265 71.09 0 1388907..1390487 - 526 115351321 - Bamb_1268 - sodium/hydrogen exchanger 1266 71.26 +1 1390513..1390773 - 86 115351322 - Bamb_1269 - hypothetical protein 1267 63.76 0 1391048..1391734 + 228 115351323 - Bamb_1270 - isochorismatase hydrolase 1268 67.90 0 1391814..1392788 - 324 115351324 - Bamb_1271 - LysR family transcriptional regulator 1269 66.67 0 1392839..1393006 + 55 115351325 - Bamb_1272 - hypothetical protein 1270 68.15 0 1393026..1394918 + 630 115351326 - Bamb_1273 - amidohydrolase 3 1271 66.89 0 1394920..1395366 + 148 115351327 - Bamb_1274 - DoxX family protein 1272 66.99 0 1395420..1396334 + 304 115351328 - Bamb_1275 - hypothetical protein 1273 71.55 +1 1396331..1397026 + 231 115351329 - Bamb_1276 - hypothetical protein 1274 67.38 0 1397023..1398567 + 514 115351330 - Bamb_1277 - hypothetical protein 1275 67.04 0 1398671..1400272 - 533 115351331 - Bamb_1278 - phosphoesterase 1276 68.37 0 1400458..1401867 + 469 115351332 - Bamb_1279 - di-haem cytochrome c peroxidase 1277 65.89 0 1401995..1402381 + 128 115351333 - Bamb_1280 - hypothetical protein 1278 69.43 0 1402392..1402862 + 156 115351334 - Bamb_1281 - NUDIX hydrolase 1279 64.68 0 1402975..1404684 - 569 115351335 - Bamb_1282 - glutaminyl-tRNA synthetase 1280 70.48 0 1404938..1405147 + 69 115351336 - Bamb_1283 - putative osmosis-related lipoprotein 1281 74.32 +1 1405310..1405858 + 182 115351337 - Bamb_1284 - hypothetical protein 1282 69.09 0 1405932..1407212 - 426 115351338 - Bamb_1285 - L-carnitine dehydratase/bile acid-inducible protein F 1283 66.70 0 1407381..1410005 + 874 115351339 alaS Bamb_1286 - alanyl-tRNA synthetase 1284 51.03 -2 1410228..1410470 + 80 115351340 - Bamb_1287 - hypothetical protein 1285 67.75 0 1410611..1412362 + 583 115351341 - Bamb_1288 - polypeptide-transport-associated domain-containing protein 1286 68.09 0 1412359..1415316 + 985 115351342 - Bamb_1289 - filamentous haemagglutinin outer membrane protein 1287 72.47 +1 1415502..1416431 - 309 115351343 - Bamb_1290 - LysR family transcriptional regulator 1288 75.14 +1 1416556..1417782 + 408 115351344 - Bamb_1291 - hypothetical protein 1289 69.09 0 1417902..1418438 + 178 115351345 - Bamb_1292 - NUDIX hydrolase 1290 67.35 0 1418558..1418995 + 145 115351346 - Bamb_1293 - thioesterase superfamily protein 1291 72.61 +1 1419006..1419947 + 313 115351347 - Bamb_1294 - inner-membrane translocator 1292 75.22 +1 1419940..1421166 + 408 115351348 - Bamb_1295 - inner-membrane translocator 1293 73.47 +1 1421163..1421912 + 249 115351349 - Bamb_1296 - ABC transporter related 1294 75.32 +1 1421909..1422613 + 234 115351350 - Bamb_1297 - ABC transporter related 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0