version 1.0
Burkholderia cepacia AMMD chromosome 1, complete sequence - 1..3556545 3213 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1152 72.22 +1 1263717..1264454 + 245 115351208 - Bamb_1155 - phosphoribosyltransferase 1153 72.71 +1 1264441..1265664 - 407 115351209 - Bamb_1156 - polyhydroxyalkanoate depolymerase, intracellular 1154 70.16 0 1265848..1266477 + 209 115351210 - Bamb_1157 - glutathione S-transferase-like protein 1155 66.15 0 1266835..1267029 + 64 115351211 - Bamb_1158 - hypothetical protein 1156 67.14 0 1267141..1268622 - 493 115351212 - Bamb_1159 - general substrate transporter 1157 71.77 +1 1269162..1269494 + 110 115351213 - Bamb_1160 - hypothetical protein 1158 66.39 0 1269538..1270272 - 244 115351214 - Bamb_1161 - DNA polymerase III subunit epsilon 1159 65.09 0 1270311..1270754 - 147 115351215 - Bamb_1162 - ribonuclease H 1160 67.77 0 1270751..1271563 - 270 115351216 - Bamb_1163 - methyltransferase type 11 1161 69.35 0 1271606..1272388 + 260 115351217 - Bamb_1164 - hydroxyacylglutathione hydrolase 1162 67.30 0 1272540..1274129 + 529 115351218 - Bamb_1165 - lytic transglycosylase, catalytic 1163 70.15 0 1274289..1275521 + 410 115351219 - Bamb_1166 - major facilitator transporter 1164 65.53 0 1275879..1277021 + 380 115351220 - Bamb_1167 - carbamoyl phosphate synthase small subunit 1165 68.01 0 1277059..1277730 + 223 115351221 - Bamb_1168 - leucine export protein LeuE 1166 65.04 0 1277791..1281045 + 1084 115351222 carB Bamb_1169 - carbamoyl phosphate synthase large subunit 1167 63.10 0 1281164..1281640 + 158 115351223 greA Bamb_1170 - transcription elongation factor GreA 1168 66.88 0 1281655..1282122 + 155 115351224 - Bamb_1171 - hypothetical protein 1169 69.89 0 1282178..1282705 - 175 115351225 - Bamb_1172 - hypothetical protein 1170 62.44 -1 1282899..1283561 + 220 115351226 - Bamb_1173 - ribosomal RNA methyltransferase RrmJ/FtsJ 1171 64.35 0 1283728..1285623 + 631 115351227 - Bamb_1174 - ATP-dependent metalloprotease FtsH 1172 70.59 0 1285652..1286593 + 313 115351228 - Bamb_1175 - dihydropteroate synthase 1173 70.72 0 1286630..1287985 + 451 115351229 - Bamb_1176 - phosphoglucosamine mutase 1174 64.52 0 1288451..1289476 + 341 115351230 - Bamb_1177 - phosphate ABC transporter, periplasmic phosphate-binding protein 1175 64.13 0 1289571..1290557 + 328 115351231 pstC Bamb_1178 - phosphate transporter permease subunit 1176 65.66 0 1290554..1291447 + 297 115351232 pstA Bamb_1179 - phosphate transporter permease subunit 1177 62.07 -1 1291463..1292311 + 282 115351233 - Bamb_1180 - phosphate ABC transporter, ATPase subunit 1178 62.84 0 1292330..1293034 + 234 115351234 - Bamb_1181 - phosphate uptake regulator, PhoU 1179 64.81 0 1293064..1293765 + 233 115351235 - Bamb_1182 - two component transcriptional regulator 1180 65.61 0 1293823..1295142 + 439 115351236 - Bamb_1183 - histidine kinase 1181 66.18 0 1295266..1297329 - 687 115351237 - Bamb_1184 - polyphosphate kinase 1182 67.26 0 1297609..1299123 + 504 115351238 - Bamb_1185 - Ppx/GppA phosphatase 1183 65.97 0 1299188..1299619 - 143 115351239 - Bamb_1186 - hypothetical protein 1184 53.57 -2 1300257..1300859 + 200 115351240 - Bamb_1187 - hypothetical protein 1185 56.46 -2 1301316..1301609 + 97 115351241 - Bamb_1188 - hypothetical protein 1186 57.07 -2 1301631..1302203 + 190 115351242 - Bamb_1189 - hypothetical protein 1187 58.64 -1 1302205..1304085 - 626 115351243 - Bamb_1190 - hypothetical protein 1188 57.67 -2 1304226..1306337 + 703 115351244 - Bamb_1191 - Rhs element Vgr protein 1189 60.79 -1 1306349..1307692 + 447 115351245 - Bamb_1192 - hypothetical protein 1190 60.56 -1 1307685..1309355 + 556 115351246 - Bamb_1193 - hypothetical protein 1191 51.70 -2 1309357..1309944 + 195 115351247 - Bamb_1194 - hypothetical protein 1192 68.63 0 1311162..1311620 + 152 115351248 - Bamb_1195 - phosphohistidine phosphatase, SixA 1193 66.91 0 1311780..1312586 + 268 115351249 - Bamb_1196 - putative hemolysin-like protein 1194 61.40 -1 1312796..1312966 - 56 115351250 - Bamb_1197 - hypothetical protein 1195 70.90 0 1313105..1313293 + 62 115351251 - Bamb_1198 - hypothetical protein 1196 71.19 0 1313313..1314683 - 456 115351252 - Bamb_1199 - MATE efflux family protein 1197 68.92 0 1314694..1315092 - 132 115351253 - Bamb_1200 - hypothetical protein 1198 70.31 0 1315099..1316718 - 539 115351254 - Bamb_1201 - AMP-dependent synthetase and ligase 1199 68.69 0 1317095..1317787 - 230 115351255 - Bamb_1202 - peptidase M23B 1200 69.68 0 1317908..1318870 - 320 115351256 - Bamb_1203 - aldose 1-epimerase 1201 64.62 0 1319308..1320138 + 276 115351257 - Bamb_1204 - undecaprenyl pyrophosphate phosphatase 1202 61.90 -1 1320695..1321114 + 139 115351258 - Bamb_1205 - putative TIS1421-transposase orfA protein 1203 58.84 -1 1321836..1322666 - 276 115351259 - Bamb_1206 - exonuclease, RNase T and DNA polymerase III 1204 62.12 -1 1322828..1323157 + 109 115351260 - Bamb_1207 - hypothetical protein 1205 60.13 -1 1323499..1324263 - 254 115351261 - Bamb_1208 - hypothetical protein 1206 59.04 -1 1324767..1325015 - 82 115351262 - Bamb_1209 - hypothetical protein 1207 66.20 0 1325495..1326133 + 212 115351263 - Bamb_1210 - hypothetical protein 1208 62.16 -1 1326218..1326550 + 110 115351264 - Bamb_1211 - hypothetical protein 1209 66.94 0 1326750..1327118 + 122 115351265 - Bamb_1212 - hypothetical protein 1210 67.90 0 1327317..1327640 + 107 115351266 - Bamb_1213 - hypothetical protein 1211 60.63 -1 1327719..1328546 - 275 115351267 - Bamb_1214 - cyclic nucleotide-binding protein 1212 63.08 0 1328798..1329355 + 185 115351268 - Bamb_1215 - ECF subfamily RNA polymerase sigma-24 factor 1213 66.67 0 1329470..1329787 + 105 115351269 - Bamb_1216 - hypothetical protein 1214 68.77 0 1329817..1330434 + 205 115351270 - Bamb_1217 - hypothetical protein 1215 63.76 0 1330813..1331259 + 148 115351271 - Bamb_1218 - hypothetical protein 1216 59.06 -1 1331368..1331709 - 113 115351272 - Bamb_1219 - hypothetical protein 1217 61.15 -1 1331764..1332162 - 132 115351273 - Bamb_1220 - hypothetical protein 1218 64.63 0 1332159..1333682 - 507 115351274 - Bamb_1221 - Altronate dehydratase 1219 65.03 0 1333679..1334839 - 386 115351275 - Bamb_1222 - mannitol dehydrogenase domain-containing protein 1220 62.90 0 1334864..1335871 - 335 115351276 - Bamb_1223 - alcohol dehydrogenase 1221 65.06 0 1335885..1336757 - 290 115351277 - Bamb_1224 - amidohydrolase 2 1222 65.39 0 1336754..1337770 - 338 115351278 - Bamb_1225 - aldo/keto reductase 1223 62.34 -1 1337837..1338784 - 315 115351279 - Bamb_1226 - periplasmic binding protein/LacI transcriptional regulator 1224 64.95 0 1338824..1339873 - 349 115351280 - Bamb_1227 - inner-membrane translocator 1225 64.03 0 1339848..1341401 - 517 115351281 - Bamb_1228 - ABC transporter related 1226 66.80 0 1341596..1342345 + 249 115351282 - Bamb_1229 - GntR domain-containing protein 1227 65.64 0 1342335..1342724 + 129 115351283 - Bamb_1230 - hypothetical protein 1228 66.45 0 1342728..1343189 + 153 115351284 - Bamb_1231 - 2Fe-2S iron-sulfur cluster binding domain-containing protein 1229 70.24 0 1343186..1345510 + 774 115351285 - Bamb_1232 - aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding 1230 69.56 0 1345955..1347784 + 609 115351286 - Bamb_1233 - acyl-CoA dehydrogenase domain-containing protein 1231 71.97 +1 1347911..1348891 + 326 115351287 - Bamb_1234 - alcohol dehydrogenase 1232 68.20 0 1349066..1350436 - 456 115351288 - Bamb_1235 - periplasmic sensor signal transduction histidine kinase 1233 68.04 0 1350437..1351162 - 241 115351289 - Bamb_1236 - two component transcriptional regulator 1234 68.81 0 1351409..1352155 + 248 115351290 - Bamb_1237 - MltA-interacting MipA family protein 1235 70.98 0 1352495..1352749 + 84 115351291 - Bamb_1238 - hypothetical protein 1236 68.72 0 1352823..1354037 - 404 115351292 - Bamb_1239 - lytic transglycosylase, catalytic 1237 67.61 0 1354478..1355638 - 386 115351293 - Bamb_1240 - porin 1238 71.65 +1 1356034..1356816 + 260 115351294 - Bamb_1241 - hypothetical protein 1239 67.70 0 1356938..1357516 + 192 115351295 - Bamb_1242 - flavin reductase domain-containing protein 1240 71.91 +1 1357572..1358468 - 298 115351296 - Bamb_1243 - LysR family transcriptional regulator 1241 67.44 0 1358566..1359864 + 432 115351297 - Bamb_1244 - CitMHS family citrate/H+ symporter 1242 72.91 +1 1359901..1361262 + 453 115351298 - Bamb_1245 - hypothetical protein 1243 69.55 0 1361262..1361573 + 103 115351299 - Bamb_1246 - hypothetical protein 1244 69.78 0 1361857..1363686 + 609 115351300 - Bamb_1247 - methyl-accepting chemotaxis sensory transducer 1245 68.73 0 1363809..1364582 + 257 115351301 - Bamb_1248 - hypothetical protein 1246 67.76 0 1364616..1365440 + 274 115351302 - Bamb_1249 - hypothetical protein 1247 65.70 0 1365500..1366429 - 309 115351303 - Bamb_1250 - phosphatidate cytidylyltransferase 1248 67.14 0 1366466..1367098 - 210 115351304 - Bamb_1251 - phospholipid/glycerol acyltransferase 1249 70.63 0 1367549..1368154 + 201 115351305 - Bamb_1252 - CDP-alcohol phosphatidyltransferase 1250 70.83 0 1368193..1369992 + 599 115351306 - Bamb_1253 - alpha/beta hydrolase fold 1251 73.08 +1 1369989..1371392 + 467 115351307 - Bamb_1254 - dual specificity protein phosphatase 66.92 MEAN 4.28 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0