version 1.0
Buchnera aphidicola str. Cc (Cinara cedri), complete genome - 1..416380 357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 30 16.75 -1 39462..41234 - 590 116514980 danG BCc_035 - DNA primase 31 29.63 +1 41306..41521 - 71 116514981 rpsU BCc_036 - 30S ribosomal protein S21 32 23.16 0 41712..42743 + 343 116514982 gcp BCc_037 - Gcp 33 20.88 0 42863..44107 + 414 116514983 cca BCc_038 - tRNA CCA-pyrophosphorylase 34 20.24 0 44744..46507 + 587 116514984 lig BCc_039 - DNA ligase 35 18.81 0 46858..48282 + 474 116514985 gltX BCc_042 - GltX 36 15.99 -1 48902..50371 + 489 116514986 fliF BCc_043 - hypothetical protein 37 11.18 -2 50368..51342 + 324 116514987 fliG BCc_044 - hypothetical protein 38 15.22 -1 51357..52046 + 229 116514988 fliH BCc_045 - hypothetical protein 39 23.29 0 52052..53425 + 457 116514989 fliI BCc_046 - hypothetical protein 40 15.06 -1 54847..55251 + 134 116514990 fliN BCc_047 - hypothetical protein 41 20.95 0 55416..56150 + 244 116514991 fliP BCc_048 - flagellar biosynthesis protein FliP 42 19.48 0 56190..56456 + 88 116514992 fliQ BCc_049 - hypothetical protein 43 11.36 -2 56462..57262 + 266 116514993 fliR BCc_050 - hypothetical protein 44 16.97 0 57387..57551 - 54 116514994 rpmG BCc_051 - 50S ribosomal protein L33 45 22.97 0 57563..57784 - 73 116514995 rpmB BCc_052 - 50S ribosomal protein L28 46 22.96 0 57899..58438 - 179 116514996 ppa BCc_053 - hypothetical protein 47 18.60 0 59958..60785 - 275 116514997 yraL BCc_055 - YraL 48 25.74 0 61084..62307 + 407 116514998 fabB BCc_056 - 3-oxoacyl-(acyl-carrier-protein) synthase I 49 23.93 0 62504..63460 + 318 116514999 talA BCc_057 - transaldolase B 50 26.98 +1 63507..65504 + 665 116515000 tktB BCc_058 - TktB 51 23.17 0 65594..66724 + 376 116515001 dapE BCc_059 - succinyl-diaminopimelate desuccinylase 52 25.28 0 66878..67771 - 297 116515002 dapA BCc_060 - hypothetical protein 53 29.28 +1 68027..69088 - 353 116515003 aroC BCc_061 - chorismate synthase 54 22.16 0 69362..69898 + 178 116515004 yfcN BCc_062 - YfcN 55 26.33 +1 70187..71086 + 299 116515005 hisG BCc_063 - ATP phosphoribosyltransferase 56 25.15 0 71094..72389 + 431 116515006 hisD BCc_064 - hypothetical protein 57 19.87 0 72425..73486 + 353 116515007 hisC BCc_065 - hypothetical protein 58 22.47 0 73488..74555 + 355 116515008 hisB BCc_066 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 59 20.98 0 74556..75146 + 196 116515009 hisH BCc_067 - hypothetical protein 60 22.63 0 75151..75888 + 245 116515010 hisA BCc_068 - hypothetical protein 61 27.16 +1 75870..76646 + 258 116515011 hisF BCc_069 - imidazole glycerol phosphate synthase subunit HisF 62 20.87 0 76640..77257 + 205 116515012 hisI BCc_070 - hypothetical protein 63 24.42 0 77322..78734 + 470 116515013 gnsD BCc_071 - 6-phosphogluconate dehydrogenase, decarboxylating 64 19.53 0 78929..80572 + 547 116515014 metG BCc_072 - hypothetical protein 65 16.06 -1 80573..81880 - 435 116515015 mesJ BCc_073 - hypothetical protein 66 19.04 0 82139..83425 + 428 116515016 tyrS BCc_075 - hypothetical protein 67 16.25 -1 83466..83822 - 118 116515017 sufA BCc_076 - FeS assembly scaffold protein 68 24.69 0 84313..85365 + 350 116515018 aroH BCc_077 - phospho-2-dehydro-3-deoxyheptonate aldolase 69 19.96 0 85506..87434 + 642 116515019 thrS BCc_078 - hypothetical protein 70 25.14 0 87438..87974 + 178 116515020 infC BCc_079 - hypothetical protein 71 22.22 0 88036..88233 + 65 116515021 rpmI BCc_080 - 50S ribosomal protein L35 72 24.72 0 88277..88636 + 119 116515022 rplT BCc_081 - 50S ribosomal protein L20 73 20.06 0 88747..89748 + 333 116515023 pheS BCc_082 - hypothetical protein 74 18.07 0 89764..92154 + 796 116515024 pheT BCc_083 - hypothetical protein 75 24.44 0 92161..92475 + 104 116515025 himA BCc_084 - hypothetical protein 76 15.87 -1 92883..94823 - 646 116515026 glyS BCc_085 - hypothetical protein 77 22.34 0 94827..95708 - 293 116515027 glyQ BCc_086 - glycyl-tRNA synthetase subunit alpha 78 22.22 0 95902..96774 + 290 116515028 nfo BCc_087 - hypothetical protein 79 14.81 -1 96893..97189 + 98 116515029 rplY BCc_088 - 50S ribosomal protein L25 80 17.87 0 97688..98515 + 275 116515030 ksgA BCc_089 - hypothetical protein 81 24.70 0 98637..101855 - 1072 116515031 carB BCc_090 - hypothetical protein 82 22.55 0 101834..102964 - 376 116515032 carA BCc_091 - hypothetical protein 83 19.46 0 103047..103868 - 273 116515033 dapB BCc_092 - hypothetical protein 84 19.75 0 104019..106844 - 941 116515034 ileS BCc_093 - hypothetical protein 85 16.09 -1 107181..107441 + 86 116515035 rpsT BCc_094 - 30S ribosomal protein S20 86 26.05 +1 107518..108684 - 388 116515036 dnaJ BCc_095 - hypothetical protein 87 27.86 +1 108818..110734 - 638 116515037 dnaK BCc_096 - hypothetical protein 88 19.09 0 111122..111493 + 123 116515038 nuoA BCc_097 - NADH dehydrogenase I chain A 89 28.61 +1 111618..112295 + 225 116515039 nuoB BCc_098 - NADH dehydrogenase subunit B 90 26.60 +1 112466..114202 + 578 116515040 nuoCD BCc_099 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 91 23.99 0 114234..114704 + 156 116515041 nuoE BCc_100 - NADH dehydrogenase I chain E 92 26.65 +1 114701..116017 + 438 116515042 nuoF BCc_101 - NADH dehydrogenase I chain F 93 22.02 0 116140..118878 + 912 116515043 nuoG BCc_102 - NADH dehydrogenase I chain G 94 23.96 0 118905..119843 + 312 116515044 nuoH BCc_103 - NADH dehydrogenase I chain H 95 27.11 +1 119859..120404 + 181 116515045 nuoI BCc_104 - NADH dehydrogenase I chain I 96 15.43 -1 120421..120906 + 161 116515046 nuoJ BCc_105 - NADH dehydrogenase I chain J 97 19.14 0 120942..121244 + 100 116515047 nuoK BCc_106 - NADH dehydrogenase I chain K 98 16.08 -1 121241..123106 + 621 116515048 nuoL BCc_107 - NADH dehydrogenase I chain L 99 18.32 0 123412..124650 + 412 116515049 nuoM BCc_108 - NADH dehydrogenase I chain M 100 16.94 0 124666..126111 + 481 116515050 nuoN BCc_109 - NADH dehydrogenase I chain N 101 25.16 0 126199..127152 - 317 116515051 prsA BCc_110 - hypothetical protein 102 25.88 0 127420..128493 + 357 116515052 prfA BCc_111 - hypothetical protein 103 20.50 0 128516..129349 + 277 116515053 hemK BCc_112 - hypothetical protein 104 17.90 0 129388..130197 + 269 116515054 ychA BCc_113 - YchA 105 20.56 0 130297..131517 + 406 116515055 ackA BCc_114 - AckA 106 23.81 0 131608..132594 + 328 116515056 pta BCc_115 - hypothetical protein 107 24.28 0 132701..135184 - 827 116515057 gyrA BCc_116 - DNA gyrase, A subunit 108 24.38 0 135380..135982 - 200 116515058 ahpC BCc_117 - hypothetical protein 109 21.49 0 136126..136809 + 227 116515059 ung BCc_118 - Ung 110 11.89 -2 136846..137358 - 170 116515060 grpE BCc_119 - hypothetical protein 111 24.68 0 138114..138425 + 103 116515061 ydhD BCc_121 - YdhD 112 27.63 +1 138471..139136 - 221 116515062 rnt BCc_122 - ribonuclease T 113 19.34 0 139571..140149 + 192 116515063 pth BCc_123 - hypothetical protein 114 19.06 0 140205..141248 + 347 116515064 ychF BCc_124 - GTP-binding protein 115 23.90 0 141328..142620 - 430 116515065 thrC BCc_125 - threonine synthase 116 25.95 0 142607..143554 - 315 116515066 thrB BCc_126 - homoserine kinase 117 18.80 0 143574..146036 - 820 116515067 thrA BCc_127 - hypothetical protein 118 18.71 0 146438..147661 - 407 116515068 pcnB BCc_128 - hypothetical protein 119 22.35 0 148324..149133 + 269 116515069 truA BCc_129 - hypothetical protein 120 23.31 0 149470..152064 + 864 116515070 secA BCc_130 - hypothetical protein 121 25.44 0 152550..155210 + 886 116515071 aceE BCc_131 - pyruvate dehydrogenase subunit E1 122 21.61 0 155222..156475 + 417 116515072 aceF BCc_132 - hypothetical protein 123 25.00 0 156561..157988 + 475 116515073 lpdA BCc_133 - LpdA 124 20.24 0 158292..158627 - 111 116515074 yadR BCc_134 - YadR 125 32.21 +2 158816..159976 - 386 116515075 ftsZ BCc_135 - hypothetical protein 126 20.78 0 160042..161292 - 416 116515076 ftsA BCc_136 - ATP-binding cell division protein 127 20.56 0 161767..162690 - 307 116515077 yabC BCc_137 - S-adenosyl-dependent methyl transferase 128 20.70 0 162839..163321 - 160 116515078 ilvH BCc_138 - hypothetical protein 129 26.55 +1 163331..165055 - 574 116515079 ilvI BCc_139 - IlvI 21.40 MEAN 4.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.