version 1.0
Buchnera aphidicola str. Cc (Cinara cedri), complete genome - 1..416380 357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2 22.14 0 1981..4374 - 797 116514952 gyrB BCc_002 - DNA gyrase subunit B 3 15.72 -1 4535..5641 - 368 116514953 dnaN BCc_003 - DNA polymerase III, b subunit 4 18.34 0 5647..6960 - 437 116514954 dnaA BCc_004 - DnaA 5 34.81 +2 7220..7354 + 44 116514955 rpmH BCc_005 - 50S ribosomal protein L34 6 14.49 -1 7377..7721 + 114 116514956 rnpA BCc_006 - hypothetical protein 7 17.83 0 8129..8986 + 285 116514957 yidC BCc_007 - hypothetical protein 8 18.97 0 9061..10425 + 454 116514958 thdF BCc_008 - GTP-binding protein 9 29.25 +1 10754..11047 + 97 116514959 groES BCc_010 - hypothetical protein 10 33.15 +2 11102..12754 + 550 116514960 groEL BCc_011 - chaperonin GroEL 11 23.21 0 12893..13465 + 190 116514961 efp BCc_012 - hypothetical protein 12 22.36 0 13484..14221 - 245 116514962 dnaC BCc_013 - DNA replication protein DnaC 13 19.58 0 14426..14992 - 188 116514963 yhhF BCc_014 - YhhF 14 18.92 0 15068..16108 + 346 116514964 ftsY BCc_015 - hypothetical protein 15 25.11 0 16181..17056 + 291 116514965 rpoH BCc_016 - RNA polymerase sigma-32 factor 16 24.09 0 17328..19610 + 760 116514966 metE BCc_017 - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase 17 28.37 +1 19824..24056 - 1410 116514967 rpoC BCc_018 - RNA polymerase, b' subunit 18 25.99 0 24138..28169 - 1343 116514968 rpoB BCc_019 - RNA polymerase, b subunit 19 24.12 0 28396..28764 - 122 116514969 rplL BCc_020 - 50S ribosomal protein L12 20 15.43 -1 28816..29301 - 161 116514970 rplJ BCc_021 - 50S ribosomal protein L10 21 22.61 0 29473..30153 - 226 116514971 rplA BCc_022 - 50S ribosomal protein L1 22 25.98 0 30156..30590 - 144 116514972 rplK BCc_023 - 50S ribosomal protein L11 23 23.94 0 30641..31183 - 180 116514973 nusG BCc_024 - hypothetical protein 24 18.35 0 31186..31572 - 128 116514974 secE BCc_025 - hypothetical protein 25 19.84 0 32539..33420 + 293 116514975 metF BCc_030 - 5,10-methylenetetrahydrofolate reductase 26 16.73 -1 33603..34397 + 264 116514976 argB BCc_031 - hypothetical protein 27 26.42 +1 34426..35625 + 399 116514977 argG BCc_032 - hypothetical protein 28 23.72 0 35658..37040 + 460 116514978 argH BCc_033 - hypothetical protein 29 24.38 0 37456..39297 - 613 116514979 rpoD BCc_034 - RNA polymerase major s factor 30 16.75 -1 39462..41234 - 590 116514980 danG BCc_035 - DNA primase 31 29.63 +1 41306..41521 - 71 116514981 rpsU BCc_036 - 30S ribosomal protein S21 32 23.16 0 41712..42743 + 343 116514982 gcp BCc_037 - Gcp 33 20.88 0 42863..44107 + 414 116514983 cca BCc_038 - tRNA CCA-pyrophosphorylase 34 20.24 0 44744..46507 + 587 116514984 lig BCc_039 - DNA ligase 35 18.81 0 46858..48282 + 474 116514985 gltX BCc_042 - GltX 36 15.99 -1 48902..50371 + 489 116514986 fliF BCc_043 - hypothetical protein 37 11.18 -2 50368..51342 + 324 116514987 fliG BCc_044 - hypothetical protein 38 15.22 -1 51357..52046 + 229 116514988 fliH BCc_045 - hypothetical protein 39 23.29 0 52052..53425 + 457 116514989 fliI BCc_046 - hypothetical protein 40 15.06 -1 54847..55251 + 134 116514990 fliN BCc_047 - hypothetical protein 41 20.95 0 55416..56150 + 244 116514991 fliP BCc_048 - flagellar biosynthesis protein FliP 42 19.48 0 56190..56456 + 88 116514992 fliQ BCc_049 - hypothetical protein 43 11.36 -2 56462..57262 + 266 116514993 fliR BCc_050 - hypothetical protein 44 16.97 0 57387..57551 - 54 116514994 rpmG BCc_051 - 50S ribosomal protein L33 45 22.97 0 57563..57784 - 73 116514995 rpmB BCc_052 - 50S ribosomal protein L28 46 22.96 0 57899..58438 - 179 116514996 ppa BCc_053 - hypothetical protein 47 18.60 0 59958..60785 - 275 116514997 yraL BCc_055 - YraL 48 25.74 0 61084..62307 + 407 116514998 fabB BCc_056 - 3-oxoacyl-(acyl-carrier-protein) synthase I 49 23.93 0 62504..63460 + 318 116514999 talA BCc_057 - transaldolase B 50 26.98 +1 63507..65504 + 665 116515000 tktB BCc_058 - TktB 51 23.17 0 65594..66724 + 376 116515001 dapE BCc_059 - succinyl-diaminopimelate desuccinylase 52 25.28 0 66878..67771 - 297 116515002 dapA BCc_060 - hypothetical protein 53 29.28 +1 68027..69088 - 353 116515003 aroC BCc_061 - chorismate synthase 54 22.16 0 69362..69898 + 178 116515004 yfcN BCc_062 - YfcN 55 26.33 +1 70187..71086 + 299 116515005 hisG BCc_063 - ATP phosphoribosyltransferase 56 25.15 0 71094..72389 + 431 116515006 hisD BCc_064 - hypothetical protein 57 19.87 0 72425..73486 + 353 116515007 hisC BCc_065 - hypothetical protein 58 22.47 0 73488..74555 + 355 116515008 hisB BCc_066 - imidazole glycerol-phosphate dehydratase/histidinol phosphatase 59 20.98 0 74556..75146 + 196 116515009 hisH BCc_067 - hypothetical protein 60 22.63 0 75151..75888 + 245 116515010 hisA BCc_068 - hypothetical protein 61 27.16 +1 75870..76646 + 258 116515011 hisF BCc_069 - imidazole glycerol phosphate synthase subunit HisF 62 20.87 0 76640..77257 + 205 116515012 hisI BCc_070 - hypothetical protein 63 24.42 0 77322..78734 + 470 116515013 gnsD BCc_071 - 6-phosphogluconate dehydrogenase, decarboxylating 64 19.53 0 78929..80572 + 547 116515014 metG BCc_072 - hypothetical protein 65 16.06 -1 80573..81880 - 435 116515015 mesJ BCc_073 - hypothetical protein 66 19.04 0 82139..83425 + 428 116515016 tyrS BCc_075 - hypothetical protein 67 16.25 -1 83466..83822 - 118 116515017 sufA BCc_076 - FeS assembly scaffold protein 68 24.69 0 84313..85365 + 350 116515018 aroH BCc_077 - phospho-2-dehydro-3-deoxyheptonate aldolase 69 19.96 0 85506..87434 + 642 116515019 thrS BCc_078 - hypothetical protein 70 25.14 0 87438..87974 + 178 116515020 infC BCc_079 - hypothetical protein 71 22.22 0 88036..88233 + 65 116515021 rpmI BCc_080 - 50S ribosomal protein L35 72 24.72 0 88277..88636 + 119 116515022 rplT BCc_081 - 50S ribosomal protein L20 73 20.06 0 88747..89748 + 333 116515023 pheS BCc_082 - hypothetical protein 74 18.07 0 89764..92154 + 796 116515024 pheT BCc_083 - hypothetical protein 75 24.44 0 92161..92475 + 104 116515025 himA BCc_084 - hypothetical protein 76 15.87 -1 92883..94823 - 646 116515026 glyS BCc_085 - hypothetical protein 77 22.34 0 94827..95708 - 293 116515027 glyQ BCc_086 - glycyl-tRNA synthetase subunit alpha 78 22.22 0 95902..96774 + 290 116515028 nfo BCc_087 - hypothetical protein 79 14.81 -1 96893..97189 + 98 116515029 rplY BCc_088 - 50S ribosomal protein L25 80 17.87 0 97688..98515 + 275 116515030 ksgA BCc_089 - hypothetical protein 81 24.70 0 98637..101855 - 1072 116515031 carB BCc_090 - hypothetical protein 82 22.55 0 101834..102964 - 376 116515032 carA BCc_091 - hypothetical protein 83 19.46 0 103047..103868 - 273 116515033 dapB BCc_092 - hypothetical protein 84 19.75 0 104019..106844 - 941 116515034 ileS BCc_093 - hypothetical protein 85 16.09 -1 107181..107441 + 86 116515035 rpsT BCc_094 - 30S ribosomal protein S20 86 26.05 +1 107518..108684 - 388 116515036 dnaJ BCc_095 - hypothetical protein 87 27.86 +1 108818..110734 - 638 116515037 dnaK BCc_096 - hypothetical protein 88 19.09 0 111122..111493 + 123 116515038 nuoA BCc_097 - NADH dehydrogenase I chain A 89 28.61 +1 111618..112295 + 225 116515039 nuoB BCc_098 - NADH dehydrogenase subunit B 90 26.60 +1 112466..114202 + 578 116515040 nuoCD BCc_099 - bifunctional NADH:ubiquinone oxidoreductase subunit C/D 91 23.99 0 114234..114704 + 156 116515041 nuoE BCc_100 - NADH dehydrogenase I chain E 92 26.65 +1 114701..116017 + 438 116515042 nuoF BCc_101 - NADH dehydrogenase I chain F 93 22.02 0 116140..118878 + 912 116515043 nuoG BCc_102 - NADH dehydrogenase I chain G 94 23.96 0 118905..119843 + 312 116515044 nuoH BCc_103 - NADH dehydrogenase I chain H 95 27.11 +1 119859..120404 + 181 116515045 nuoI BCc_104 - NADH dehydrogenase I chain I 96 15.43 -1 120421..120906 + 161 116515046 nuoJ BCc_105 - NADH dehydrogenase I chain J 97 19.14 0 120942..121244 + 100 116515047 nuoK BCc_106 - NADH dehydrogenase I chain K 98 16.08 -1 121241..123106 + 621 116515048 nuoL BCc_107 - NADH dehydrogenase I chain L 99 18.32 0 123412..124650 + 412 116515049 nuoM BCc_108 - NADH dehydrogenase I chain M 100 16.94 0 124666..126111 + 481 116515050 nuoN BCc_109 - NADH dehydrogenase I chain N 101 25.16 0 126199..127152 - 317 116515051 prsA BCc_110 - hypothetical protein 21.40 MEAN 4.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.