version 1.0
Buchnera aphidicola str. Cc (Cinara cedri), complete genome - 1..416380 357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 229 14.71 -1 281693..282202 + 169 116515179 rimM BCc_247 - 16s rRNA processing protein 230 19.94 0 282214..282900 + 228 116515180 trmD BCc_248 - hypothetical protein 231 22.13 0 282971..283318 + 115 116515181 rplS BCc_249 - 50S ribosomal protein L19 232 22.88 0 284943..285401 + 152 116515182 aroQ BCc_251 - 3-dehydroquinate dehydratase 233 15.29 -1 285441..285767 - 108 116515183 fis BCc_252 - DNA-bending protein 234 21.14 0 285849..286813 - 321 116515184 rluD BCc_253 - RluD 235 16.33 -1 287031..289676 + 881 116515185 alaS BCc_254 - hypothetical protein 236 26.67 +1 289786..289965 + 59 116515186 csrA BCc_255 - hypothetical protein 237 20.96 0 290550..290840 - 96 116515187 zapA BCc_258 - ZapA 238 23.29 0 290883..291539 - 218 116515188 rpiA BCc_259 - hypothetical protein 239 19.94 0 292106..293755 + 549 116515189 glnS BCc_263 - glutaminyl-tRNA synthetase 240 24.63 0 293837..295135 + 432 116515190 eno BCc_264 - hypothetical protein 241 14.88 -1 295241..297901 + 886 116515191 polA BCc_265 - 5'-3' exonuclease domain-containing protein 242 16.75 -1 297906..298514 - 202 116515192 engB BCc_266 - EngB 243 24.46 0 298730..300544 + 604 116515193 typA BCc_267 - GTP-binding elongation factor family protein 244 15.28 -1 300651..301625 - 324 116515194 ygfZ BCc_268 - YgfZ 245 18.93 0 301781..302879 + 365 116515195 prfB BCc_269 - hypothetical protein 246 18.09 0 302882..304390 + 502 116515196 lysS BCc_270 - hypothetical protein 247 21.90 0 304496..305746 + 416 116515197 lysA BCc_271 - diaminopimelate decarboxylase 248 20.72 0 305849..307156 + 435 116515198 miaB BCc_272 - hypothetical protein 249 17.62 0 307190..307660 + 156 116515199 ybeY BCc_273 - YbeY 250 19.10 0 307714..310257 + 847 116515200 leuS BCc_274 - LeuS 251 10.17 -2 310302..311294 + 330 116515201 holA BCc_275 - DNA polymerase III, d subunit 252 15.19 -1 311350..311586 + 78 116515202 yhhP BCc_276 - YhhP 253 23.57 0 311592..312707 - 371 116515203 asd BCc_277 - aspartate-semialdehyde dehydrogenase 254 22.74 0 312981..314132 + 383 116515204 pgk BCc_278 - hypothetical protein 255 21.36 0 314190..315266 + 358 116515205 fba BCc_279 - fructose-bisphosphate aldolase 256 22.55 0 315463..316371 + 302 116515206 yggB BCc_280 - YggB 257 12.18 -1 316461..319589 + 1042 116515207 recC BCc_281 - RecC 258 13.96 -1 319605..323108 + 1167 116515208 recB BCc_282 - hypothetical protein 259 15.38 -1 323110..324891 + 593 116515209 recD BCc_283 - hypothetical protein 260 17.72 0 325171..325599 + 142 116515210 nusB BCc_285 - hypothetical protein 261 15.85 -1 325934..326854 - 306 116515211 cyoE BCc_287 - CyoE 262 10.49 -2 326827..327150 - 107 116515212 cyoD BCc_288 - CyoD 263 17.09 0 327188..327772 - 194 116515213 cyoC BCc_289 - CyoC 264 25.89 0 327820..329793 - 657 116515214 cyoB BCc_290 - CyoB 265 17.52 0 329851..330729 - 292 116515215 cyoA BCc_291 - CyoA 266 13.67 -1 331217..331516 + 99 116515216 bolA BCc_292 - BolA 267 23.22 0 331724..332326 + 200 116515217 clpP BCc_293 - hypothetical protein 268 21.54 0 332379..333641 + 420 116515218 clpX BCc_294 - ATP-dependent protease ATP-binding subunit 269 24.14 0 333749..336097 + 782 116515219 lon BCc_295 - DNA-binding ATP-dependent protease La 270 19.13 0 338177..339901 + 574 116515220 mdlA BCc_297 - ABC transporter ATP-binding protein 271 18.18 0 339933..341687 + 584 116515221 mdlB BCc_298 - ABC transporter ATP-binding protein 272 18.70 0 341914..343020 + 368 116515222 dnaX BCc_300 - DNA polymerase III, g and t subunits 273 21.36 0 343124..343432 + 102 116515223 ybaB BCc_301 - hypothetical protein 274 20.80 0 343540..345414 + 624 116515224 htpG BCc_302 - heat shock protein 90 275 17.67 0 345493..346143 + 216 116515225 adk BCc_303 - hypothetical protein 276 23.16 0 346377..347231 + 284 116515226 folD BCc_305 - 5,10-methylene-tetrahydrofolate dehydrogenase 277 19.78 0 347242..348672 - 476 116515227 cysS BCc_306 - hypothetical protein 278 21.21 0 348866..349129 + 87 116515228 ybeD BCc_307 - hypothetical protein 279 36.67 +2 349218..349427 - 69 116515229 cspE BCc_308 - cold shock protein CspE 280 19.93 0 353033..353875 - 280 116515230 aroE BCc_312 - hypothetical protein 281 21.78 0 354044..354493 + 149 116515231 def BCc_313 - hypothetical protein 282 19.85 0 354529..355485 + 318 116515232 fmt BCc_314 - hypothetical protein 283 26.45 +1 355598..355960 - 120 116515233 rplQ BCc_315 - 50S ribosomal protein L17 284 28.89 +1 355988..356977 - 329 116515234 rpoA BCc_316 - DNA-directed RNA polymerase subunit alpha 285 25.93 0 357011..357631 - 206 116515235 rpsD BCc_317 - 30S ribosomal protein S4 286 32.57 +2 357665..358057 - 130 116515236 rpsK BCc_318 - 30S ribosomal protein S11 287 25.83 0 358076..358435 - 119 116515237 rpsM BCc_319 - 30S ribosomal protein S13 288 26.50 +1 358535..358651 - 38 116515238 rpmJ BCc_320 - 50S ribosomal protein L36 289 21.22 0 358687..359982 - 431 116515239 secY BCc_321 - hypothetical protein 290 25.57 0 360031..360468 - 145 116515240 rplO BCc_322 - 50S ribosomal protein L15 291 26.44 +1 360480..360653 - 57 116515241 rpmD BCc_323 - 50S ribosomal subunit protein L30 292 28.69 +1 360678..361172 - 164 116515242 rpsE BCc_324 - 30S ribosomal protein S5 293 25.47 0 361191..361559 - 122 116515243 rplR BCc_325 - 50S ribosomal protein L18 294 24.81 0 361561..362100 - 179 116515244 rplF BCc_326 - 50S ribosomal protein L6 295 23.16 0 362138..362530 - 130 116515245 rpsH BCc_327 - 30S ribosomal protein S8 296 30.39 +1 362584..362889 - 101 116515246 rpsN BCc_328 - 30S ribosomal protein S14 297 23.33 0 362908..363447 - 179 116515247 rplE BCc_329 - 50S ribosomal protein L5 298 23.27 0 363466..363783 - 105 116515248 rplX BCc_330 - 50S ribosomal protein L24 299 30.91 +2 363805..364176 - 123 116515249 rplN BCc_331 - 50S ribosomal protein L14 300 20.78 0 364315..364569 - 84 116515250 rpsQ BCc_332 - 30S ribosomal protein S17 301 16.67 -1 364566..364763 - 65 116515251 rpmC BCc_333 - 50S ribosomal protein L29 302 29.93 +1 364766..365176 - 136 116515252 rplP BCc_334 - 50S ribosomal protein L16 303 29.94 +1 365198..365905 - 235 116515253 rpsC BCc_335 - 30S ribosomal protein S3 304 26.67 +1 365883..366257 - 124 116515254 rplV BCc_336 - 50S ribosomal protein L22 305 28.07 +1 366275..366559 - 94 116515255 rpsS BCc_337 - 30S ribosomal protein S19 306 32.00 +2 366579..367400 - 273 116515256 rplB BCc_338 - 50S ribosomal protein L2 307 19.80 0 367420..367722 - 100 116515257 rplW BCc_339 - 50S ribosomal protein L23 308 25.25 0 367719..368324 - 201 116515258 rplD BCc_340 - 50S ribosomal protein L4 309 26.00 0 368345..368971 - 208 116515259 rplC BCc_341 - 50S ribosomal protein L3 310 32.37 +2 369022..369333 - 103 116515260 rpsJ BCc_342 - 30S ribosomal protein S10 311 31.90 +2 369501..370685 - 394 116515261 tuf BCc_343 - elongation factor Tu 312 30.15 +1 370749..372854 - 701 116515262 fusA BCc_344 - hypothetical protein 313 31.63 +2 372933..373403 - 156 116515263 rpsG BCc_345 - 30S ribosomal protein S7 314 32.00 +2 373424..373798 - 124 116515264 rpsL BCc_346 - 30S ribosomal protein S12 315 20.07 0 373885..374178 - 97 116515265 yheL BCc_347 - YheL 316 19.72 0 374191..374550 - 119 116515266 yheM BCc_348 - YheM 317 22.90 0 374573..374965 - 130 116515267 yheN BCc_349 - YheN 318 19.27 0 375256..376272 - 338 116515268 trpS BCc_350 - hypothetical protein 319 22.32 0 376327..376989 - 220 116515269 rpe BCc_351 - hypothetical protein 320 21.38 0 377098..378201 - 367 116515270 aroB BCc_352 - 3-dehydroquinate synthase 321 21.30 0 378261..378800 - 179 116515271 aroK BCc_353 - hypothetical protein 322 23.54 0 379163..379744 - 193 116515272 yhgI BCc_355 - GNT I transport systemmembrane-bound protein 323 15.46 -1 379835..380623 + 262 116515273 bioH BCc_356 - BioH 324 28.21 +1 380672..381217 - 181 116515274 ssb BCc_357 - hypothetical protein 325 17.19 0 381419..382465 + 348 116515275 dusA BCc_358 - tRNA-dihydrouridine synthase A 326 26.27 +1 382752..384125 + 457 116515276 dnaB BCc_359 - hypothetical protein 327 16.28 -1 384482..384874 + 130 116515277 yqgF BCc_360 - YggF 328 17.36 0 384938..386089 + 383 116515278 yggW BCc_361 - YggW 21.40 MEAN 4.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0