version 1.0
Buchnera aphidicola str. Cc (Cinara cedri), complete genome - 1..416380 357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 189 16.87 0 239432..239680 - 82 116515139 minE BCc_203 - hypothetical protein 190 26.57 +1 239686..240498 - 270 116515140 minD BCc_204 - hypothetical protein 191 19.36 0 240534..241256 - 240 116515141 minC BCc_205 - hypothetical protein 192 15.99 -1 241436..242467 + 343 116515142 rsmC BCc_206 - 16S RNA m2G1207 methylase 193 14.40 -1 242914..243996 - 360 116515143 ompA BCc_210 - OmpA 194 20.43 0 244844..245548 + 234 116515144 flgF BCc_211 - FlgF 195 12.50 -1 245817..246464 + 215 116515145 flgH BCc_212 - FlgH 196 19.22 0 246530..247351 + 273 116515146 flgI BCc_213 - FlgI 197 18.66 0 247506..248459 + 317 116515147 rluC BCc_214 - RluC 198 25.81 0 248531..248716 + 61 116515148 rpmF BCc_215 - 50S ribosomal protein L32 199 16.93 0 248975..249913 + 312 116515149 fabD BCc_216 - hypothetical protein 200 22.49 0 249910..250647 + 245 116515150 fabG BCc_217 - 3-oxoacyl-(acyl-carrier protein) reductase 201 13.99 -1 250714..250956 + 80 116515151 acpP BCc_218 - hypothetical protein 202 16.26 -1 250965..251942 + 325 116515152 holB BCc_219 - DNA polymerase III, d' subunit 203 16.60 -1 251985..252779 + 264 116515153 ycfH BCc_220 - YcfH 204 22.37 0 253255..254640 - 461 116515154 asnC BCc_221 - asparaginyl-tRNA synthetase 205 16.61 -1 254777..255739 - 320 116515155 yceA BCc_222 - YceA 206 20.34 0 255791..258646 - 951 116515156 valS BCc_223 - hypothetical protein 207 21.16 0 259090..260091 + 333 116515157 argF BCc_224 - hypothetical protein 208 18.58 0 260143..260508 + 121 116515158 yhaR BCc_225 - YhaR 209 25.48 0 260602..262332 - 576 116515159 deaD BCc_226 - ATP-dependent RNA helicase 210 26.51 +1 262614..264695 - 693 116515160 pnp BCc_227 - polynucleotide phosphorylase/polyadenylase 211 21.48 0 264891..265160 - 89 116515161 rpsO BCc_228 - 30S ribosomal protein S15 212 20.62 0 265222..266157 - 311 116515162 truB BCc_229 - hypothetical protein 213 18.80 0 266206..266556 - 116 116515163 rbfA BCc_230 - hypothetical protein 214 21.59 0 266634..268787 - 717 116515164 infB BCc_231 - hypothetical protein 215 24.19 0 269027..270514 - 495 116515165 nusA BCc_232 - NusA 216 18.88 0 271040..271288 - 82 116515166 secG BCc_234 - SecG 217 26.62 +1 271722..273524 - 600 116515167 hflB BCc_235 - ATP-dependent protease 218 20.32 0 273579..274208 - 209 116515168 ftsJ BCc_236 - hypothetical protein 219 23.33 0 274479..274958 - 159 116515169 greA BCc_237 - hypothetical protein 220 14.12 -1 275374..275628 + 84 116515170 yrbA BCc_238 - YrbA 221 19.87 0 275965..276276 + 103 116515171 rplU BCc_239 - 50S ribosomal protein L21 222 25.16 0 276315..276620 + 101 116515172 rpmA BCc_240 - 50S ribosomal protein L27 223 21.24 0 276665..277681 + 338 116515173 yhbZ BCc_241 - Obg family GTP-binding protein 224 28.37 +1 277779..278141 - 120 116515174 rpsI BCc_242 - 30S ribosomal protein S9 225 22.38 0 278174..278602 - 142 116515175 rplM BCc_243 - 50S ribosomal protein L13 226 15.84 -1 278769..279923 + 384 116515176 pheA BCc_244 - hypothetical protein 227 18.34 0 280008..281354 + 448 116515177 ffh BCc_245 - hypothetical protein 228 20.97 0 281409..281675 + 88 116515178 rpsP BCc_246 - 30S ribosomal protein S16 229 14.71 -1 281693..282202 + 169 116515179 rimM BCc_247 - 16s rRNA processing protein 230 19.94 0 282214..282900 + 228 116515180 trmD BCc_248 - hypothetical protein 231 22.13 0 282971..283318 + 115 116515181 rplS BCc_249 - 50S ribosomal protein L19 232 22.88 0 284943..285401 + 152 116515182 aroQ BCc_251 - 3-dehydroquinate dehydratase 233 15.29 -1 285441..285767 - 108 116515183 fis BCc_252 - DNA-bending protein 234 21.14 0 285849..286813 - 321 116515184 rluD BCc_253 - RluD 235 16.33 -1 287031..289676 + 881 116515185 alaS BCc_254 - hypothetical protein 236 26.67 +1 289786..289965 + 59 116515186 csrA BCc_255 - hypothetical protein 237 20.96 0 290550..290840 - 96 116515187 zapA BCc_258 - ZapA 238 23.29 0 290883..291539 - 218 116515188 rpiA BCc_259 - hypothetical protein 239 19.94 0 292106..293755 + 549 116515189 glnS BCc_263 - glutaminyl-tRNA synthetase 240 24.63 0 293837..295135 + 432 116515190 eno BCc_264 - hypothetical protein 241 14.88 -1 295241..297901 + 886 116515191 polA BCc_265 - 5'-3' exonuclease domain-containing protein 242 16.75 -1 297906..298514 - 202 116515192 engB BCc_266 - EngB 243 24.46 0 298730..300544 + 604 116515193 typA BCc_267 - GTP-binding elongation factor family protein 244 15.28 -1 300651..301625 - 324 116515194 ygfZ BCc_268 - YgfZ 245 18.93 0 301781..302879 + 365 116515195 prfB BCc_269 - hypothetical protein 246 18.09 0 302882..304390 + 502 116515196 lysS BCc_270 - hypothetical protein 247 21.90 0 304496..305746 + 416 116515197 lysA BCc_271 - diaminopimelate decarboxylase 248 20.72 0 305849..307156 + 435 116515198 miaB BCc_272 - hypothetical protein 249 17.62 0 307190..307660 + 156 116515199 ybeY BCc_273 - YbeY 250 19.10 0 307714..310257 + 847 116515200 leuS BCc_274 - LeuS 251 10.17 -2 310302..311294 + 330 116515201 holA BCc_275 - DNA polymerase III, d subunit 252 15.19 -1 311350..311586 + 78 116515202 yhhP BCc_276 - YhhP 253 23.57 0 311592..312707 - 371 116515203 asd BCc_277 - aspartate-semialdehyde dehydrogenase 254 22.74 0 312981..314132 + 383 116515204 pgk BCc_278 - hypothetical protein 255 21.36 0 314190..315266 + 358 116515205 fba BCc_279 - fructose-bisphosphate aldolase 256 22.55 0 315463..316371 + 302 116515206 yggB BCc_280 - YggB 257 12.18 -1 316461..319589 + 1042 116515207 recC BCc_281 - RecC 258 13.96 -1 319605..323108 + 1167 116515208 recB BCc_282 - hypothetical protein 259 15.38 -1 323110..324891 + 593 116515209 recD BCc_283 - hypothetical protein 260 17.72 0 325171..325599 + 142 116515210 nusB BCc_285 - hypothetical protein 261 15.85 -1 325934..326854 - 306 116515211 cyoE BCc_287 - CyoE 262 10.49 -2 326827..327150 - 107 116515212 cyoD BCc_288 - CyoD 263 17.09 0 327188..327772 - 194 116515213 cyoC BCc_289 - CyoC 264 25.89 0 327820..329793 - 657 116515214 cyoB BCc_290 - CyoB 265 17.52 0 329851..330729 - 292 116515215 cyoA BCc_291 - CyoA 266 13.67 -1 331217..331516 + 99 116515216 bolA BCc_292 - BolA 267 23.22 0 331724..332326 + 200 116515217 clpP BCc_293 - hypothetical protein 268 21.54 0 332379..333641 + 420 116515218 clpX BCc_294 - ATP-dependent protease ATP-binding subunit 269 24.14 0 333749..336097 + 782 116515219 lon BCc_295 - DNA-binding ATP-dependent protease La 270 19.13 0 338177..339901 + 574 116515220 mdlA BCc_297 - ABC transporter ATP-binding protein 271 18.18 0 339933..341687 + 584 116515221 mdlB BCc_298 - ABC transporter ATP-binding protein 272 18.70 0 341914..343020 + 368 116515222 dnaX BCc_300 - DNA polymerase III, g and t subunits 273 21.36 0 343124..343432 + 102 116515223 ybaB BCc_301 - hypothetical protein 274 20.80 0 343540..345414 + 624 116515224 htpG BCc_302 - heat shock protein 90 275 17.67 0 345493..346143 + 216 116515225 adk BCc_303 - hypothetical protein 276 23.16 0 346377..347231 + 284 116515226 folD BCc_305 - 5,10-methylene-tetrahydrofolate dehydrogenase 277 19.78 0 347242..348672 - 476 116515227 cysS BCc_306 - hypothetical protein 278 21.21 0 348866..349129 + 87 116515228 ybeD BCc_307 - hypothetical protein 279 36.67 +2 349218..349427 - 69 116515229 cspE BCc_308 - cold shock protein CspE 280 19.93 0 353033..353875 - 280 116515230 aroE BCc_312 - hypothetical protein 281 21.78 0 354044..354493 + 149 116515231 def BCc_313 - hypothetical protein 282 19.85 0 354529..355485 + 318 116515232 fmt BCc_314 - hypothetical protein 283 26.45 +1 355598..355960 - 120 116515233 rplQ BCc_315 - 50S ribosomal protein L17 284 28.89 +1 355988..356977 - 329 116515234 rpoA BCc_316 - DNA-directed RNA polymerase subunit alpha 285 25.93 0 357011..357631 - 206 116515235 rpsD BCc_317 - 30S ribosomal protein S4 286 32.57 +2 357665..358057 - 130 116515236 rpsK BCc_318 - 30S ribosomal protein S11 287 25.83 0 358076..358435 - 119 116515237 rpsM BCc_319 - 30S ribosomal protein S13 288 26.50 +1 358535..358651 - 38 116515238 rpmJ BCc_320 - 50S ribosomal protein L36 21.40 MEAN 4.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0