version 1.0
Buchnera aphidicola str. Cc (Cinara cedri), complete genome - 1..416380 357 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 96 15.43 -1 120421..120906 + 161 116515046 nuoJ BCc_105 - NADH dehydrogenase I chain J 97 19.14 0 120942..121244 + 100 116515047 nuoK BCc_106 - NADH dehydrogenase I chain K 98 16.08 -1 121241..123106 + 621 116515048 nuoL BCc_107 - NADH dehydrogenase I chain L 99 18.32 0 123412..124650 + 412 116515049 nuoM BCc_108 - NADH dehydrogenase I chain M 100 16.94 0 124666..126111 + 481 116515050 nuoN BCc_109 - NADH dehydrogenase I chain N 101 25.16 0 126199..127152 - 317 116515051 prsA BCc_110 - hypothetical protein 102 25.88 0 127420..128493 + 357 116515052 prfA BCc_111 - hypothetical protein 103 20.50 0 128516..129349 + 277 116515053 hemK BCc_112 - hypothetical protein 104 17.90 0 129388..130197 + 269 116515054 ychA BCc_113 - YchA 105 20.56 0 130297..131517 + 406 116515055 ackA BCc_114 - AckA 106 23.81 0 131608..132594 + 328 116515056 pta BCc_115 - hypothetical protein 107 24.28 0 132701..135184 - 827 116515057 gyrA BCc_116 - DNA gyrase, A subunit 108 24.38 0 135380..135982 - 200 116515058 ahpC BCc_117 - hypothetical protein 109 21.49 0 136126..136809 + 227 116515059 ung BCc_118 - Ung 110 11.89 -2 136846..137358 - 170 116515060 grpE BCc_119 - hypothetical protein 111 24.68 0 138114..138425 + 103 116515061 ydhD BCc_121 - YdhD 112 27.63 +1 138471..139136 - 221 116515062 rnt BCc_122 - ribonuclease T 113 19.34 0 139571..140149 + 192 116515063 pth BCc_123 - hypothetical protein 114 19.06 0 140205..141248 + 347 116515064 ychF BCc_124 - GTP-binding protein 115 23.90 0 141328..142620 - 430 116515065 thrC BCc_125 - threonine synthase 116 25.95 0 142607..143554 - 315 116515066 thrB BCc_126 - homoserine kinase 117 18.80 0 143574..146036 - 820 116515067 thrA BCc_127 - hypothetical protein 118 18.71 0 146438..147661 - 407 116515068 pcnB BCc_128 - hypothetical protein 119 22.35 0 148324..149133 + 269 116515069 truA BCc_129 - hypothetical protein 120 23.31 0 149470..152064 + 864 116515070 secA BCc_130 - hypothetical protein 121 25.44 0 152550..155210 + 886 116515071 aceE BCc_131 - pyruvate dehydrogenase subunit E1 122 21.61 0 155222..156475 + 417 116515072 aceF BCc_132 - hypothetical protein 123 25.00 0 156561..157988 + 475 116515073 lpdA BCc_133 - LpdA 124 20.24 0 158292..158627 - 111 116515074 yadR BCc_134 - YadR 125 32.21 +2 158816..159976 - 386 116515075 ftsZ BCc_135 - hypothetical protein 126 20.78 0 160042..161292 - 416 116515076 ftsA BCc_136 - ATP-binding cell division protein 127 20.56 0 161767..162690 - 307 116515077 yabC BCc_137 - S-adenosyl-dependent methyl transferase 128 20.70 0 162839..163321 - 160 116515078 ilvH BCc_138 - hypothetical protein 129 26.55 +1 163331..165055 - 574 116515079 ilvI BCc_139 - IlvI 130 23.31 0 165214..166041 - 275 116515080 dapD BCc_140 - 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 131 21.21 0 166182..166973 - 263 116515081 map BCc_141 - hypothetical protein 132 25.21 0 167330..168055 + 241 116515082 rpsB BCc_142 - 30S ribosomal protein S2 133 21.30 0 168112..168942 + 276 116515083 tsf BCc_143 - Tsf 134 21.11 0 169040..169759 + 239 116515084 pyrH BCc_144 - hypothetical protein 135 17.74 0 169814..170371 + 185 116515085 frr BCc_145 - hypothetical protein 136 14.39 -1 170544..172259 + 571 116515086 yaeT BCc_146 - YaeT 137 19.56 0 172329..172778 + 149 116515087 fabZ BCc_147 - (3R)-hydroxymyristoyl-(acyl carrier protein) dehydratase 138 19.75 0 172906..176424 + 1172 116515088 dnaE BCc_148 - DNA polymerase III, a subunit 139 20.17 0 176442..177710 - 422 116515089 proS BCc_149 - prolyl-tRNA synthetase 140 16.31 -1 178132..179247 + 371 116515090 flhB BCc_150 - hypothetical protein 141 19.38 0 179257..181356 + 699 116515091 flhA BCc_151 - FlhA 142 17.77 0 181368..183083 - 571 116515092 argS BCc_152 - hypothetical protein 143 17.67 0 185343..186038 + 231 116515093 dnaQ BCc_156 - DNA polymerase III, e subunit 144 14.89 -1 186323..186913 + 196 116515094 grpE1 BCc_158 - GrpE1 145 19.36 0 186979..187448 + 156 116515095 smpB BCc_159 - SsrA-binding protein 146 20.78 0 187494..187955 + 153 116515096 tadA BCc_160 - hypothetical protein 147 16.80 0 187971..188351 - 126 116515097 acpS BCc_161 - hypothetical protein 148 15.44 -1 188326..189219 - 297 116515098 era BCc_162 - hypothetical protein 149 26.73 +1 189225..189905 - 226 116515099 rnc BCc_163 - hypothetical protein 150 13.99 -1 189989..190846 - 285 116515100 lepB BCc_164 - hypothetical protein 151 22.56 0 190867..192657 - 596 116515101 lepA BCc_165 - GTP-binding protein LepA 152 18.81 0 192964..194085 + 373 116515102 trmU BCc_166 - hypothetical protein 153 20.78 0 194317..195081 + 254 116515103 fabI BCc_167 - FabI 154 20.18 0 195292..197238 + 648 116515104 rnb BCc_168 - exoribonuclease II 155 19.21 0 197331..197939 + 202 116515105 lipB BCc_169 - hypothetical protein 156 23.15 0 198016..198948 + 310 116515106 lipA BCc_170 - lipoyl synthase 157 18.70 0 199051..200916 - 621 116515107 sppA BCc_171 - hypothetical protein 158 23.31 0 201093..201521 - 142 116515108 yciA BCc_172 - YciA 159 8.63 -2 201623..202375 - 250 116515109 yciC BCc_173 - YciC 160 18.74 0 202788..203518 + 243 116515110 yciL BCc_174 - YciL 161 18.00 0 203605..204426 - 273 116515111 suhB BCc_175 - hypothetical protein 162 18.98 0 204572..205651 + 359 116515112 yfgB BCc_176 - YfgB 163 19.25 0 205733..207010 + 425 116515113 hisS BCc_177 - hypothetical protein 164 24.72 0 207123..208376 + 417 116515114 glyA BCc_178 - hypothetical protein 165 16.51 -1 208553..209539 - 328 116515115 pgl BCc_179 - 6-phosphogluconolactonase 166 18.52 0 209599..211650 - 683 116515116 mfd BCc_180 - hypothetical protein 167 26.63 +1 212086..213084 + 332 116515117 gapA BCc_181 - hypothetical protein 168 19.26 0 213225..213764 - 179 116515118 fldA BCc_182 - hypothetical protein 169 19.89 0 214091..214648 + 185 116515119 ybgI BCc_183 - YbgI 170 19.06 0 214894..217695 + 933 116515120 sucA BCc_184 - 2-oxoglutarate dehydrogenase E1 component 171 20.13 0 217701..218897 + 398 116515121 sucB BCc_185 - 2-oxoglutarate dehydrogenase E2 component 172 22.51 0 219187..219879 + 230 116515122 gpmA BCc_186 - hypothetical protein 173 24.61 0 220001..220963 + 320 116515123 pfkA BCc_187 - 6-phosphofructokinase 174 22.61 0 221127..221891 - 254 116515124 tpiA BCc_188 - hypothetical protein 175 22.11 0 222000..222293 - 97 116515125 himD BCc_189 - HimD 176 24.78 0 222342..224012 - 556 116515126 rpsA BCc_190 - 30S ribosomal protein S1 177 22.86 0 224252..225559 - 435 116515127 aroA BCc_191 - 3-phosphoshikimate 1-carboxyvinyltransferase 178 22.50 0 225626..226714 - 362 116515128 serC BCc_192 - phosphoserine aminotransferase 179 20.97 0 226809..228110 - 433 116515129 serS BCc_193 - hypothetical protein 180 22.63 0 228397..229386 + 329 116515130 trxB BCc_194 - hypothetical protein 181 25.46 0 229401..229616 + 71 116515131 infA BCc_195 - hypothetical protein 182 18.82 0 229678..231393 + 571 116515132 aspS BCc_196 - AspS 183 15.09 -1 231498..232226 + 242 116515133 yebC BCc_197 - YebC 184 24.24 0 232481..233920 - 479 116515134 pykA BCc_198 - PykA 185 17.11 0 234325..235785 + 486 116515135 zwf BCc_199 - hypothetical protein 186 19.64 0 235925..236815 + 296 116515136 htpX BCc_200 - hypothetical protein 187 13.77 -1 237138..238727 + 529 116515137 yoaE BCc_201 - YoaE 188 19.26 0 238727..239401 + 224 116515138 yeaZ BCc_202 - YeaZ 189 16.87 0 239432..239680 - 82 116515139 minE BCc_203 - hypothetical protein 190 26.57 +1 239686..240498 - 270 116515140 minD BCc_204 - hypothetical protein 191 19.36 0 240534..241256 - 240 116515141 minC BCc_205 - hypothetical protein 192 15.99 -1 241436..242467 + 343 116515142 rsmC BCc_206 - 16S RNA m2G1207 methylase 193 14.40 -1 242914..243996 - 360 116515143 ompA BCc_210 - OmpA 194 20.43 0 244844..245548 + 234 116515144 flgF BCc_211 - FlgF 195 12.50 -1 245817..246464 + 215 116515145 flgH BCc_212 - FlgH 21.40 MEAN 4.64 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.