version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3287 60.63 -1 3685104..3685484 - 126 146340462 - BRADO3502 - putative 3-dehydroquinate dehydratase type 2 3288 64.57 0 3685725..3686345 - 206 146340463 - BRADO3503 - hypothetical protein 3289 63.68 0 3686654..3687757 - 367 146340464 - BRADO3504 - putative citrate utilization protein B (citB); putative membrane protein 3290 64.90 0 3687744..3689159 - 471 146340465 - BRADO3505 - tricarballylate dehydrogenase 3291 69.27 +1 3689309..3689962 + 217 146340466 - BRADO3506 - GntR family transcriptional regulator 3292 64.50 0 3690053..3690838 - 261 146340467 - BRADO3507 - putative outer membrane protein 3293 66.74 0 3690914..3692311 - 465 146340468 - BRADO3508 - hypothetical protein 3294 66.75 0 3692490..3693689 + 399 146340469 - BRADO3509 - putative aminotransferase 3295 63.38 0 3693807..3695144 + 445 146340470 dctA BRADO3510 - C4-dicarboxylate transport protein 3296 67.20 0 3695236..3698451 - 1071 146340471 - BRADO3511 - putative ribonuclease E 3297 68.42 0 3699344..3700600 + 418 146340472 - BRADO3513 - putative N-acetylmuramoyl-L-alanine amidase 3298 65.31 0 3700824..3703337 + 837 146340473 - BRADO3514 - putative membrane carboxypeptidase/penicillin-binding protein; putative exported protein 3299 61.97 -1 3703334..3703567 - 77 146340474 - BRADO3515 - hypothetical protein 3300 65.33 0 3703620..3704591 + 323 146340475 prfB BRADO3516 - peptide chain release factor 2 3301 69.52 +1 3704595..3705470 + 291 146340476 - BRADO3517 - dehydrogenase NAD(P)-binding domain-containing protein 3302 64.47 0 3705532..3706167 - 211 146340477 upp BRADO3518 - uracil phosphoribosyltransferase 3303 65.74 0 3706220..3707950 - 576 146340478 - BRADO3519 - putative glutathione-regulated potassium-efflux system protein 3304 70.13 +1 3708006..3708524 + 172 146340479 - BRADO3520 - hypothetical protein 3305 71.42 +1 3709263..3710525 + 420 146340480 - BRADO3522 - hypothetical protein 3306 69.80 +1 3710542..3711978 - 478 146340481 - BRADO3523 - transcriptional regulator 3307 66.84 0 3712086..3713228 + 380 146340482 - BRADO3524 - putative aminotransferase 3308 68.19 0 3713379..3714560 + 393 146340483 - BRADO3525 - putative cystathionine beta-lyase (CBL; Beta-cystathionase; cysteine lyase) 3309 68.07 0 3714662..3715945 + 427 146340484 - BRADO3526 - hypothetical protein 3310 63.87 0 3716005..3716754 - 249 146340485 - BRADO3527 - hypothetical protein 3311 68.46 0 3716865..3718091 - 408 146340486 - BRADO3528 - putative metalloendopeptidase 3312 65.29 0 3718338..3719066 - 242 146340487 - BRADO3529 - hypothetical protein 3313 67.21 0 3719568..3723266 + 1232 146340488 - BRADO3530 - hypothetical protein 3314 67.54 0 3723279..3724535 - 418 146340489 - BRADO3531 - hypothetical protein 3315 65.79 0 3724592..3725845 - 417 146340490 tyrS BRADO3532 - tyrosyl-tRNA synthetase 3316 69.75 +1 3726043..3727146 + 367 146340491 anmK BRADO3533 - anhydro-N-acetylmuramic acid kinase 3317 66.81 0 3727228..3727905 + 225 146340492 - BRADO3534 - putative glutathione S-transferase 3318 64.66 0 3728276..3728923 - 215 146340493 - BRADO3535 - hypothetical protein 3319 64.27 0 3729171..3730088 - 305 146340494 - BRADO3536 - hypothetical protein 3320 68.93 0 3730140..3730316 + 58 146340495 - BRADO3537 - hypothetical protein 3321 65.58 0 3730488..3731687 + 399 146340496 - BRADO3538 - hypothetical protein 3322 68.13 0 3731738..3732901 + 387 146340497 nifS BRADO3539 - cysteine desulfurase 3323 62.06 -1 3732986..3734482 + 498 146340498 sufB BRADO3540 - cysteine desulfurase activator complex subunit SufB 3324 54.98 -2 3734482..3734712 + 76 146340499 - BRADO3541 - hypothetical protein 3325 63.35 0 3734716..3735468 + 250 146340500 sufC BRADO3542 - SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein 3326 67.95 0 3735488..3736810 + 440 146340501 sufD BRADO3543 - sufD, needed for fhuF Fe-S center production/stability 3327 64.02 0 3736807..3738054 + 415 146340502 sufS BRADO3544 - cysteine desulfurase 3328 62.63 0 3738051..3738422 + 123 146340503 - BRADO3545 - hypothetical protein 3329 64.10 0 3738484..3738873 + 129 146340504 - BRADO3546 - Iron-sulfur cluster assembly protein 3330 65.36 0 3738994..3739530 + 178 146340505 - BRADO3547 - hypothetical protein 3331 64.61 0 3739565..3740632 - 355 146340506 - BRADO3548 - hypothetical protein 3332 67.02 0 3740993..3742423 - 476 146340507 - BRADO3549 - putative ATP-dependent RNA helicase 3333 63.61 0 3742742..3743329 + 195 146340508 - BRADO3550 - hypothetical protein 3334 66.27 0 3743419..3744918 + 499 146340509 - BRADO3551 - hypothetical protein 3335 66.80 0 3744928..3745695 - 255 146340510 - BRADO3552 - putative 2-deoxy-D-gluconate 3-dehydrogenase (2-keto-3-deoxygluconate oxidoreductase) 3336 64.52 0 3745726..3745911 - 61 146340511 - BRADO3553 - hypothetical protein 3337 65.00 0 3746134..3746913 - 259 146340512 - BRADO3554 - putative outer-membrane immunogenic protein precursor; putative exported protein 3338 67.05 0 3747154..3749229 - 691 146340513 parE BRADO3555 - DNA topoisomerase IV subunit B 3339 68.17 0 3749501..3750031 + 176 146340514 - BRADO3556 - hypothetical protein 3340 68.97 0 3750265..3750915 + 216 146340515 - BRADO3557 - hypothetical protein 3341 66.26 0 3750927..3751916 + 329 146340516 argC BRADO3558 - N-acetyl-gamma-glutamyl-phosphate reductase 3342 66.02 0 3751981..3753219 + 412 146340517 - BRADO3559 - threonine dehydratase 3343 62.32 -1 3753258..3754385 + 375 146340518 - BRADO3560 - putative RNA ligase 3344 63.97 0 3754639..3755898 + 419 146340519 - BRADO3561 - putative ABC sugar transporter (substrate binding protein); putative exported protein 3345 64.54 0 3755900..3756841 + 313 146340520 - BRADO3562 - putative ABC transporter (permease protein); putative membrane protein 3346 61.72 -1 3756834..3757682 + 282 146340521 - BRADO3563 - putative sugar ABC transporter (permease protein); putative exported protein 3347 66.12 0 3757705..3758802 + 365 146340522 - BRADO3564 - putative dehydrogenase/oxidoreductase 3348 62.79 0 3758813..3759457 + 214 146340523 - BRADO3565 - hypothetical protein 3349 70.48 +1 3759454..3760503 + 349 146340524 - BRADO3566 - LacI family transcriptional regulator 3350 64.66 0 3760507..3760905 - 132 146340525 - BRADO3567 - hypothetical protein 3351 62.13 -1 3760978..3762783 - 601 146340526 phbC BRADO3568 - Poly-beta-hydroxybutyrate polymerase 3352 67.72 0 3763134..3763322 + 62 146340527 - BRADO3570 - hypothetical protein 3353 65.68 0 3763541..3764761 + 406 146340528 - BRADO3571 - aminotransferase 3354 67.50 0 3764798..3766114 + 438 146340529 hom BRADO3572 - homoserine dehydrogenase 3355 68.26 0 3766319..3767320 + 333 146340530 glpX BRADO3573 - fructose 1,6-bisphosphatase II 3356 64.58 0 3767336..3768055 + 239 146340531 - BRADO3574 - putative (S)-2-haloacid dehalogenase IVA (2-haloalkanoic acid dehalogenase IVA) (L-2-haloacid dehalogenase IVA) (halocarboxylic acid halidohydrolase IVA) 3357 58.43 -2 3768065..3768331 + 88 146340532 - BRADO3575 - hypothetical protein 3358 67.03 0 3768328..3769419 - 363 146340533 - BRADO3576 - putative methyl-accepting chemotaxis protein 3359 69.60 +1 3769716..3771557 + 613 146340534 - BRADO3577 - putative single-stranded-DNA-specific exonuclease recJ 3360 66.92 0 3772305..3772703 - 132 146340535 - BRADO3578 - hypothetical protein 3361 66.67 0 3772934..3773725 + 263 146340536 - BRADO3579 - hypothetical protein 3362 69.53 +1 3773829..3775049 - 406 146340537 - BRADO3580 - putative membrane-bound lytic transglycosylase precursor protein, putative signal peptide 3363 73.26 +2 3775101..3775631 - 176 146340538 - BRADO3581 - MarR family transcriptional regulator 3364 66.24 0 3775680..3776150 + 156 146340539 - BRADO3582 - putative carboxymuconolactone decarboxylase (CMD) family protein 3365 67.76 0 3776210..3776392 + 60 146340540 - BRADO3583 - hypothetical protein 3366 68.56 0 3776620..3776883 - 87 146340541 - BRADO3584 - hypothetical protein 3367 68.56 0 3776956..3778596 - 546 146340542 - BRADO3585 - putative peptidase M23 family protein; putative signal peptide 3368 62.08 -1 3778648..3779214 - 188 146340543 efp BRADO3586 - elongation factor P 3369 69.22 +1 3779338..3780393 + 351 146340544 - BRADO3587 - putative lysyl-tRNA synthetase (lysine--tRNA ligase) 3370 68.58 0 3780390..3781484 + 364 146340545 - BRADO3588 - putative lysine 2,3-aminomutase 3371 65.23 0 3781521..3781799 + 92 146340546 - BRADO3589 - putative signal peptide 3372 66.76 0 3781852..3782937 - 361 146340547 aroG BRADO3590 - phospho-2-dehydro-3-deoxyheptonate aldolase 3373 66.84 0 3783168..3783755 - 195 146340548 - BRADO3591 - hypothetical protein 3374 67.35 0 3783881..3784909 - 342 146340549 - BRADO3592 - hypothetical protein 3375 65.94 0 3785771..3787003 + 410 146340550 hemA BRADO3594 - 5-aminolevulinate synthase 3376 64.59 0 3787142..3787720 + 192 146340551 - BRADO3595 - hypothetical protein 3377 66.20 0 3787823..3788035 + 70 146340552 - BRADO3596 - hypothetical protein 3378 66.00 0 3788336..3789088 - 250 146340553 - BRADO3597 - hypothetical protein 3379 65.47 0 3789295..3789627 + 110 146340554 - BRADO3598 - hypothetical protein 3380 53.78 -2 3790131..3791108 + 325 146340555 - BRADO3599 - hypothetical protein 3381 66.76 0 3791179..3792255 - 358 146340556 - BRADO3600 - putative phage integrase 3382 70.33 +1 3792252..3792524 - 90 146340557 - BRADO3601 - hypothetical protein 3383 69.51 +1 3792521..3792766 - 81 146340558 - BRADO3602 - hypothetical protein 3384 69.52 +1 3792859..3793068 - 69 146340559 - BRADO3603 - hypothetical protein 3385 70.69 +1 3793071..3793244 - 57 146340560 - BRADO3604 - hypothetical protein 3386 72.67 +2 3793369..3793518 - 49 146340561 - BRADO3605 - hypothetical protein 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0