version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 3253 71.75 +1 3646113..3647273 - 386 146340428 - BRADO3466 - putative cytochrome P450 3254 62.60 0 3647756..3648001 - 81 146340429 - BRADO3468 - hypothetical protein 3255 73.25 +2 3648085..3648570 + 161 146340430 - BRADO3469 - hypothetical protein 3256 66.40 0 3648599..3648967 - 122 146340431 - BRADO3470 - hypothetical protein 3257 70.37 +1 3649109..3649432 - 107 146340432 - BRADO3471 - hypothetical protein 3258 54.57 -2 3649524..3650168 - 214 146340433 - BRADO3472 - hypothetical protein 3259 51.08 -2 3650751..3651167 + 138 146340434 - BRADO3474 - hypothetical protein 3260 65.26 0 3651292..3655062 - 1256 146340435 nrd BRADO3475 - ribonucleotide-diphosphate reductase subunit alpha 3261 70.49 +1 3655687..3656655 + 322 146340436 - BRADO3476 - DMT family permease 3262 68.31 0 3656660..3658909 - 749 146340437 - BRADO3477 - sensor histidine kinase 3263 66.14 0 3659182..3661467 - 761 146340438 - BRADO3478 - sensor histidine kinase 3264 68.00 0 3661950..3662474 - 174 146340439 - BRADO3479 - hypothetical protein 3265 65.94 0 3662857..3663267 + 136 146340440 - BRADO3480 - NADH dehydrogenase 3266 69.11 +1 3663354..3664049 - 231 146340441 - BRADO3481 - putative DJ-1/PfpI family protein 3267 70.36 +1 3664162..3665109 + 315 146340442 - BRADO3482 - bifunctional transcriptional regulator/glutamine amidotransferase-like domain-containing protein 3268 65.92 0 3665182..3666258 + 358 146340443 - BRADO3483 - hypothetical protein 3269 67.18 0 3666265..3667824 + 519 146340444 - BRADO3484 - hypothetical protein 3270 71.67 +1 3667955..3668713 + 252 146340445 - BRADO3485 - putative dehdyrogenase 3271 70.18 +1 3668735..3669985 + 416 146340446 - BRADO3486 - putative D-amino-acid dehydrogenase, FAD dependent 3272 62.33 -1 3670017..3670685 + 222 146340447 - BRADO3487 - amino acid ABC transporter membrane protein 3273 65.95 0 3670806..3671639 - 277 146340448 - BRADO3488 - putative signal peptide 3274 68.15 0 3671806..3672819 - 337 146340449 - BRADO3489 - hypothetical protein 3275 65.16 0 3672945..3674009 - 354 146340450 - BRADO3490 - hypothetical protein 3276 63.07 0 3674243..3674854 - 203 146340451 - BRADO3491 - hypothetical protein 3277 69.32 +1 3674875..3676041 - 388 146340452 - BRADO3492 - aromatic amino acid aminotransferase 3278 67.16 0 3676216..3677223 - 335 146340453 - BRADO3493 - putative lipase/esterase 3279 67.70 0 3677223..3677996 - 257 146340454 - BRADO3494 - levodione reductase 3280 72.36 +1 3678277..3679242 + 321 146340455 - BRADO3495 - putative signal peptide 3281 68.72 0 3679250..3679930 - 226 146340456 aat BRADO3496 - leucyl/phenylalanyl-tRNA--protein transferase 3282 67.77 0 3679989..3681077 - 362 146340457 - BRADO3497 - signal transduction histidine kinase 3283 60.50 -1 3681074..3681511 - 145 146340458 - BRADO3498 - putative two-component response regulator/receiver (CheY-like protein) 3284 66.54 0 3681508..3683028 - 506 146340459 - BRADO3499 - putative two-component sensor histidine kinase 3285 66.15 0 3683147..3684496 - 449 146340460 accC BRADO3500 - acetyl-CoA carboxylase biotin carboxylase subunit 3286 70.00 +1 3684581..3685060 - 159 146340461 accB BRADO3501 - acetyl-CoA carboxylase, biotin carboxyl carrier protein subunit 3287 60.63 -1 3685104..3685484 - 126 146340462 - BRADO3502 - putative 3-dehydroquinate dehydratase type 2 3288 64.57 0 3685725..3686345 - 206 146340463 - BRADO3503 - hypothetical protein 3289 63.68 0 3686654..3687757 - 367 146340464 - BRADO3504 - putative citrate utilization protein B (citB); putative membrane protein 3290 64.90 0 3687744..3689159 - 471 146340465 - BRADO3505 - tricarballylate dehydrogenase 3291 69.27 +1 3689309..3689962 + 217 146340466 - BRADO3506 - GntR family transcriptional regulator 3292 64.50 0 3690053..3690838 - 261 146340467 - BRADO3507 - putative outer membrane protein 3293 66.74 0 3690914..3692311 - 465 146340468 - BRADO3508 - hypothetical protein 3294 66.75 0 3692490..3693689 + 399 146340469 - BRADO3509 - putative aminotransferase 3295 63.38 0 3693807..3695144 + 445 146340470 dctA BRADO3510 - C4-dicarboxylate transport protein 3296 67.20 0 3695236..3698451 - 1071 146340471 - BRADO3511 - putative ribonuclease E 3297 68.42 0 3699344..3700600 + 418 146340472 - BRADO3513 - putative N-acetylmuramoyl-L-alanine amidase 3298 65.31 0 3700824..3703337 + 837 146340473 - BRADO3514 - putative membrane carboxypeptidase/penicillin-binding protein; putative exported protein 3299 61.97 -1 3703334..3703567 - 77 146340474 - BRADO3515 - hypothetical protein 3300 65.33 0 3703620..3704591 + 323 146340475 prfB BRADO3516 - peptide chain release factor 2 3301 69.52 +1 3704595..3705470 + 291 146340476 - BRADO3517 - dehydrogenase NAD(P)-binding domain-containing protein 3302 64.47 0 3705532..3706167 - 211 146340477 upp BRADO3518 - uracil phosphoribosyltransferase 3303 65.74 0 3706220..3707950 - 576 146340478 - BRADO3519 - putative glutathione-regulated potassium-efflux system protein 3304 70.13 +1 3708006..3708524 + 172 146340479 - BRADO3520 - hypothetical protein 3305 71.42 +1 3709263..3710525 + 420 146340480 - BRADO3522 - hypothetical protein 3306 69.80 +1 3710542..3711978 - 478 146340481 - BRADO3523 - transcriptional regulator 3307 66.84 0 3712086..3713228 + 380 146340482 - BRADO3524 - putative aminotransferase 3308 68.19 0 3713379..3714560 + 393 146340483 - BRADO3525 - putative cystathionine beta-lyase (CBL; Beta-cystathionase; cysteine lyase) 3309 68.07 0 3714662..3715945 + 427 146340484 - BRADO3526 - hypothetical protein 3310 63.87 0 3716005..3716754 - 249 146340485 - BRADO3527 - hypothetical protein 3311 68.46 0 3716865..3718091 - 408 146340486 - BRADO3528 - putative metalloendopeptidase 3312 65.29 0 3718338..3719066 - 242 146340487 - BRADO3529 - hypothetical protein 3313 67.21 0 3719568..3723266 + 1232 146340488 - BRADO3530 - hypothetical protein 3314 67.54 0 3723279..3724535 - 418 146340489 - BRADO3531 - hypothetical protein 3315 65.79 0 3724592..3725845 - 417 146340490 tyrS BRADO3532 - tyrosyl-tRNA synthetase 3316 69.75 +1 3726043..3727146 + 367 146340491 anmK BRADO3533 - anhydro-N-acetylmuramic acid kinase 3317 66.81 0 3727228..3727905 + 225 146340492 - BRADO3534 - putative glutathione S-transferase 3318 64.66 0 3728276..3728923 - 215 146340493 - BRADO3535 - hypothetical protein 3319 64.27 0 3729171..3730088 - 305 146340494 - BRADO3536 - hypothetical protein 3320 68.93 0 3730140..3730316 + 58 146340495 - BRADO3537 - hypothetical protein 3321 65.58 0 3730488..3731687 + 399 146340496 - BRADO3538 - hypothetical protein 3322 68.13 0 3731738..3732901 + 387 146340497 nifS BRADO3539 - cysteine desulfurase 3323 62.06 -1 3732986..3734482 + 498 146340498 sufB BRADO3540 - cysteine desulfurase activator complex subunit SufB 3324 54.98 -2 3734482..3734712 + 76 146340499 - BRADO3541 - hypothetical protein 3325 63.35 0 3734716..3735468 + 250 146340500 sufC BRADO3542 - SufC, related to ABC transporter associated with Fe-S cluster assembly ATP-binding protein 3326 67.95 0 3735488..3736810 + 440 146340501 sufD BRADO3543 - sufD, needed for fhuF Fe-S center production/stability 3327 64.02 0 3736807..3738054 + 415 146340502 sufS BRADO3544 - cysteine desulfurase 3328 62.63 0 3738051..3738422 + 123 146340503 - BRADO3545 - hypothetical protein 3329 64.10 0 3738484..3738873 + 129 146340504 - BRADO3546 - Iron-sulfur cluster assembly protein 3330 65.36 0 3738994..3739530 + 178 146340505 - BRADO3547 - hypothetical protein 3331 64.61 0 3739565..3740632 - 355 146340506 - BRADO3548 - hypothetical protein 3332 67.02 0 3740993..3742423 - 476 146340507 - BRADO3549 - putative ATP-dependent RNA helicase 3333 63.61 0 3742742..3743329 + 195 146340508 - BRADO3550 - hypothetical protein 3334 66.27 0 3743419..3744918 + 499 146340509 - BRADO3551 - hypothetical protein 3335 66.80 0 3744928..3745695 - 255 146340510 - BRADO3552 - putative 2-deoxy-D-gluconate 3-dehydrogenase (2-keto-3-deoxygluconate oxidoreductase) 3336 64.52 0 3745726..3745911 - 61 146340511 - BRADO3553 - hypothetical protein 3337 65.00 0 3746134..3746913 - 259 146340512 - BRADO3554 - putative outer-membrane immunogenic protein precursor; putative exported protein 3338 67.05 0 3747154..3749229 - 691 146340513 parE BRADO3555 - DNA topoisomerase IV subunit B 3339 68.17 0 3749501..3750031 + 176 146340514 - BRADO3556 - hypothetical protein 3340 68.97 0 3750265..3750915 + 216 146340515 - BRADO3557 - hypothetical protein 3341 66.26 0 3750927..3751916 + 329 146340516 argC BRADO3558 - N-acetyl-gamma-glutamyl-phosphate reductase 3342 66.02 0 3751981..3753219 + 412 146340517 - BRADO3559 - threonine dehydratase 3343 62.32 -1 3753258..3754385 + 375 146340518 - BRADO3560 - putative RNA ligase 3344 63.97 0 3754639..3755898 + 419 146340519 - BRADO3561 - putative ABC sugar transporter (substrate binding protein); putative exported protein 3345 64.54 0 3755900..3756841 + 313 146340520 - BRADO3562 - putative ABC transporter (permease protein); putative membrane protein 3346 61.72 -1 3756834..3757682 + 282 146340521 - BRADO3563 - putative sugar ABC transporter (permease protein); putative exported protein 3347 66.12 0 3757705..3758802 + 365 146340522 - BRADO3564 - putative dehydrogenase/oxidoreductase 3348 62.79 0 3758813..3759457 + 214 146340523 - BRADO3565 - hypothetical protein 3349 70.48 +1 3759454..3760503 + 349 146340524 - BRADO3566 - LacI family transcriptional regulator 3350 64.66 0 3760507..3760905 - 132 146340525 - BRADO3567 - hypothetical protein 3351 62.13 -1 3760978..3762783 - 601 146340526 phbC BRADO3568 - Poly-beta-hydroxybutyrate polymerase 3352 67.72 0 3763134..3763322 + 62 146340527 - BRADO3570 - hypothetical protein 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0