version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 2191 67.07 0 2499557..2501041 + 494 146339366 amn BRADO2347 - AMP nucleosidase 2192 68.21 0 2501062..2501385 - 107 146339367 - BRADO2348 - putative transcriptional regulator 2193 68.28 0 2501567..2502685 + 372 146339368 - BRADO2349 - putative oxidoreductase 2194 65.81 0 2503062..2504225 - 387 146339369 - BRADO2350 - putative cytochrome P450 2195 68.30 0 2504361..2505281 + 306 146339370 - BRADO2351 - AraC/XylS family transcription factor 2196 63.50 0 2505417..2506616 + 399 146339371 phbH BRADO2352 - 4-hydroxybenzoate 3-monooxygenase 2197 66.49 0 2506635..2508380 + 581 146339372 - BRADO2353 - putative feruloyl esterase 2198 64.29 0 2508664..2510007 + 447 146339373 - BRADO2354 - putative transposase 2199 67.02 0 2511064..2512203 + 379 146339374 - BRADO2356 - hypothetical protein 2200 66.37 0 2512547..2512879 + 110 146339375 - BRADO2357 - hypothetical protein 2201 69.29 +1 2512999..2514027 + 342 146339376 - BRADO2358 - LacI family transcriptional regulator 2202 70.81 +1 2514143..2515591 + 482 146339377 xylB BRADO2359 - xylulose kinase 2203 66.74 0 2515598..2516920 + 440 146339378 xylA BRADO2360 - xylose isomerase 2204 66.67 0 2516967..2517719 + 250 146339379 rbsA BRADO2361 - sugar (ribose) ABC transporter ATP-binding protein 2205 66.12 0 2517719..2518816 + 365 146339380 rbsC BRADO2362 - high-affinity D-ribose ABC transporter membrane protein 2206 65.17 0 2518910..2519845 + 311 146339381 - BRADO2363 - putative sugar (D-ribose) ABC transporter (periplasmic binding protein) 2207 71.00 +1 2520181..2521056 + 291 146339382 - BRADO2365 - transcriptional regulator 2208 67.05 0 2521069..2521593 - 174 146339383 fabA BRADO2366 - 3-hydroxydecanoyl-(acyl carrier protein) dehydratase 2209 67.98 0 2522031..2522258 - 75 146339384 - BRADO2368 - hypothetical protein 2210 68.28 0 2522296..2523657 + 453 146339385 - BRADO2369 - hypothetical protein 2211 70.35 +1 2523726..2524403 - 225 146339386 - BRADO2370 - putative membrane protein 2212 68.63 0 2524733..2525647 + 304 146339387 - BRADO2372 - phenylacetic acid degradation-related protein 2213 65.25 0 2525670..2526023 - 117 146339388 - BRADO2373 - hypothetical protein 2214 69.04 0 2526087..2527601 - 504 146339389 - BRADO2374 - hypothetical protein 2215 68.47 0 2527759..2528478 + 239 146339390 - BRADO2375 - putative 5-amino-6-(5-phosphoribosylamino)uracil reductase 2216 69.87 +1 2528471..2529748 + 425 146339391 - BRADO2376 - putative amine oxidase (flavin-containing) 2217 66.53 0 2529875..2532139 + 754 146339392 - BRADO2377 - putative phosphodiesterase-nucleotide pyrophosphatase 2218 68.63 0 2532158..2533177 - 339 146339393 - BRADO2378 - LysR family transcriptional regulator 2219 63.84 0 2533215..2533568 + 117 146339394 - BRADO2379 - protocatechuate 4,5-dioxygenase subunit alpha 2220 64.16 0 2533574..2534410 + 278 146339395 mhpB BRADO2380 - protocatechuate 4,5-dioxygenase subunit beta 2221 67.00 0 2534730..2535032 - 100 146339396 - BRADO2381 - hypothetical protein 2222 70.43 +1 2535063..2535752 - 229 146339397 - BRADO2382 - hypothetical protein 2223 64.75 0 2535866..2538943 - 1025 146339398 - BRADO2383 - AcrB/AcrD/AcrF family mulitdrug efflux protein 2224 64.73 0 2538973..2540055 - 360 146339399 - BRADO2384 - putative RND efflux membrane fusion protein 2225 67.30 0 2540088..2541668 - 526 146339400 - BRADO2385 - putative outer membrane efflux protein 2226 65.52 0 2542046..2543005 - 319 146339401 - BRADO2386 - hypothetical protein 2227 67.73 0 2543281..2543844 - 187 146339402 - BRADO2387 - MarR family transcriptional regulator 2228 65.26 0 2543983..2545119 + 378 146339403 - BRADO2388 - putative metal-dependent hydrolase; putative amidohydrolase 2229 67.42 0 2545161..2545955 - 264 146339404 - BRADO2389 - putative extracellular solute-binding protein 2230 65.31 0 2545991..2547313 - 440 146339405 dctA BRADO2390 - C4-dicarboxylate transport protein 2231 64.72 0 2547362..2548387 - 341 146339406 - BRADO2391 - putative amidohydrolase; putative signal peptide 2232 65.42 0 2548419..2549867 - 482 146339407 - BRADO2392 - putative MmgE/PrpD family protein 2233 68.69 0 2550313..2551545 + 410 146339408 - BRADO2393 - acetyl-CoA acetyltransferase 2234 67.06 0 2551783..2553570 + 595 146339409 - BRADO2394 - CLC-type chloride channel protein 2235 69.53 +1 2553652..2554980 + 442 146339410 - BRADO2395 - putative L-sorbosone dehydrogenase 2236 64.27 0 2555053..2555886 + 277 146339411 cyoA BRADO2396 - cytochrome o ubiquinol oxidase, subunit II 2237 67.60 0 2555911..2556552 + 213 146339412 cyoC BRADO2397 - cytochrome o ubiquinol oxidase, subunit III 2238 64.22 0 2556549..2556956 + 135 146339413 cyoD BRADO2398 - cytochrome O ubiquinol oxidase protein subunit IV 2239 68.56 0 2557114..2557905 - 263 146339414 - BRADO2399 - putative signal peptide 2240 69.76 +1 2558034..2559068 + 344 146339415 HtrA BRADO2400 - serine protease DO-like precursor 2241 66.81 0 2560481..2561167 + 228 146339416 - BRADO2402 - putative isochorismatase 2242 66.30 0 2561253..2562908 + 551 146339417 - BRADO2403 - hypothetical protein 2243 68.09 0 2563084..2563575 - 163 146339418 - BRADO2404 - putative thiol-disulfide oxidoreductase 2244 64.38 0 2563682..2564074 - 130 146339419 - BRADO2405 - hypothetical protein 2245 68.52 0 2564217..2564648 - 143 146339420 - BRADO2406 - hypothetical protein 2246 67.39 0 2564743..2565708 + 321 146339421 - BRADO2407 - LysR family transcriptional regulator 2247 67.70 0 2565791..2566567 - 258 146339422 - BRADO2408 - putative diheme cytochrome C; sulfur oxidizing protein soxA 2248 64.49 0 2566564..2566884 - 106 146339423 - BRADO2409 - putative sulfur oxidation protein soxZ 2249 67.08 0 2566884..2567372 - 162 146339424 - BRADO2410 - sulfur oxidation protein SoxY 2250 71.22 +1 2567379..2567795 - 138 146339425 - BRADO2411 - putative cytochrome c, putative soxX protein 2251 67.92 0 2567809..2569089 - 426 146339426 - BRADO2412 - sulfide dehydrogenase 2252 66.57 0 2569145..2571316 - 723 146339427 - BRADO2413 - isoquinoline 1-oxidoreductase beta subunit 2253 64.44 0 2571340..2571789 - 149 146339428 - BRADO2414 - isoquinoline 1-oxidoreductase alpha subunit 2254 69.63 +1 2571927..2573375 - 482 146339429 - BRADO2415 - MFS family transporter 2255 65.08 0 2573905..2574282 + 125 146339430 - BRADO2416 - hypothetical protein 2256 62.71 0 2574362..2574841 - 159 146339431 - BRADO2417 - hypothetical protein 2257 64.60 0 2574939..2576486 + 515 146339432 - BRADO2418 - transcriptional regulator 2258 57.61 -2 2576737..2577321 - 194 146339433 - BRADO2419 - hypothetical protein 2259 59.44 -1 2577504..2577683 - 59 146339434 - BRADO2420 - hypothetical protein 2260 62.50 0 2577845..2578204 - 119 146339435 - BRADO2421 - hypothetical protein 2261 63.27 0 2578489..2580285 - 598 146339436 - BRADO2422 - hypothetical protein 2262 71.07 +1 2580628..2581263 - 211 146339437 - BRADO2423 - GntR family transcriptional regulator 2263 65.87 0 2581419..2582423 + 334 146339438 bioB BRADO2424 - biotin synthetase 2264 65.86 0 2582634..2584499 + 621 146339439 - BRADO2425 - hypothetical protein 2265 64.37 0 2584643..2585863 + 406 146339440 - BRADO2426 - putative diguanylate cyclase (GGDEF) 2266 64.33 0 2585958..2587028 - 356 146339441 - BRADO2427 - putative glycosyl transferase 2267 65.62 0 2587452..2589077 + 541 146339442 - BRADO2428 - putative fused ATP-binding/permease protein 2268 66.67 0 2589144..2591345 + 733 146339443 - BRADO2429 - hypothetical protein 2269 66.08 0 2591342..2591851 + 169 146339444 - BRADO2430 - putative signal peptide 2270 66.75 0 2592028..2593269 + 413 146339445 - BRADO2431 - major facilitator superfamily permease 2271 66.53 0 2593282..2593989 - 235 146339446 fixK BRADO2432 - transcriptional regulator FixK 2272 63.38 0 2594120..2594515 - 131 146339447 - BRADO2433 - putative two component response regulator receiver (CheY-like protein) corresponding to a FixJ-like fragment. 2273 63.92 0 2594593..2595210 - 205 146339448 fixJ BRADO2434 - response regulator FixJ 2274 66.93 0 2595203..2596714 - 503 146339449 fixL BRADO2435 - sensor protein 2275 70.77 +1 2597155..2597886 + 243 146339450 - BRADO2436 - hypothetical protein 2276 62.21 -1 2597923..2598348 + 141 146339451 - BRADO2437 - hypothetical protein 2277 63.30 0 2598528..2600222 + 564 146339452 - BRADO2438 - cytochrome c oxidase polypeptide I 2278 62.67 0 2600219..2600968 + 249 146339453 ccoO BRADO2439 - cytochrome-c oxidase fixO chain 2279 61.79 -1 2601029..2601151 + 40 146339454 - BRADO2440 - cytochrome oxidase subunit, FixQ 2280 65.86 0 2601158..2602030 + 290 146339455 ccoP BRADO2441 - cytochrome-c oxidase fixP chain 2281 63.97 0 2602130..2603611 + 493 146339456 fixG BRADO2442 - nitrogen fixation protein FixG 2282 67.56 0 2603684..2604130 + 148 146339457 - BRADO2443 - nitrogen fixation protein fixH 2283 68.30 0 2604145..2606346 + 733 146339458 - BRADO2444 - nitrogen fixation protein fixI 2284 70.06 +1 2606346..2606522 + 58 146339459 - BRADO2445 - nitrogen fixation protein fixS 2285 69.05 0 2606492..2607793 - 433 146339460 - BRADO2446 - putative transporter 2286 64.02 0 2607800..2608291 - 163 146339461 - BRADO2447 - putative signal peptide 2287 68.35 0 2608755..2609468 + 237 146339462 - BRADO2448 - hypothetical protein 2288 68.13 0 2609487..2610377 - 296 146339463 - BRADO2449 - LysR family transcriptional regulator 2289 72.97 +2 2610586..2610696 + 36 146339464 - BRADO2450 - hypothetical protein 2290 65.62 0 2610767..2611918 + 383 146339465 - BRADO2451 - hypothetical protein 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.