version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1632 68.42 0 1864372..1865283 - 303 146338807 dppC BRADO1741 - peptide ABC transporter permease 1633 64.19 0 1865280..1866290 - 336 146338808 dppB BRADO1742 - peptide ABC transporter permease 1634 61.16 -1 1866415..1868013 - 532 146338809 dppA BRADO1743 - periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) (ABC transporter) 1635 62.96 0 1868298..1869377 - 359 146338810 - BRADO1744 - putative ABC transporter (substrate-binding protein) 1636 69.62 +1 1869459..1870373 - 304 146338811 - BRADO1745 - ABC transporter permease 1637 65.47 0 1870363..1871451 - 362 146338812 - BRADO1746 - ABC transporter permease 1638 66.73 0 1871435..1873003 - 522 146338813 - BRADO1747 - putative ABC transporter ATP-binding protein 1639 62.95 0 1873571..1874701 + 376 146338814 - BRADO1748 - putative signal peptide 1640 66.90 0 1874763..1875182 - 139 146338815 - BRADO1749 - putative cytidine and deoxycytidylate deaminase zinc-binding protein 1641 66.46 0 1875397..1876356 + 319 146338816 - BRADO1750 - putative cation-efflux pump 1642 62.08 -1 1876364..1876603 - 79 146338817 - BRADO1751 - hypothetical protein 1643 69.74 +1 1876665..1877804 - 379 146338818 - BRADO1752 - putative transport protein (permease) 1644 70.17 +1 1878003..1878944 + 313 146338819 dgoK BRADO1753 - 2-dehydro-3-deoxygalactonokinase (2-keto-3-deoxy-galactonokinase) (2-oxo-3-deoxygalactonate kinase) 1645 67.14 0 1878946..1879584 + 212 146338820 dgoA BRADO1754 - 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 1646 68.32 0 1879899..1880261 + 120 146338821 - BRADO1755 - transcriptional regulator MarR 1647 68.38 0 1880692..1882152 + 486 146338822 - BRADO1757 - hypothetical protein 1648 68.59 0 1882154..1884808 - 884 146338823 - BRADO1758 - putative fusion protein: FAD-binding monooxygenase (N-ter)/ alpha/beta-hydrolase (C-ter) 1649 67.15 0 1885096..1886343 + 415 146338824 serA BRADO1760 - D-3-phosphoglycerate dehydrogenase 1650 67.29 0 1886363..1886842 + 159 146338825 - BRADO1761 - molybdenum ABC transporter ATP-binding protein 1651 68.79 0 1886751..1887173 - 140 146338826 - BRADO1762 - molybdenum transport regulator 1652 68.70 0 1887170..1887760 - 196 146338827 - BRADO1763 - molybdenum ABC transporter ATP-binding protein 1653 69.44 +1 1887772..1888635 - 287 146338828 - BRADO1764 - hypothetical protein 1654 70.62 +1 1888844..1889932 - 362 146338829 modC BRADO1765 - molybdenum ABC transporter ATP-binding protein 1655 67.25 0 1889929..1890618 - 229 146338830 modB BRADO1766 - molybdenum ABC transporter permease protein 1656 64.19 0 1890648..1891415 - 255 146338831 modA BRADO1767 - molybdenum ABC transporter (substrate-binding protein) 1657 68.91 0 1891908..1893467 - 519 146338832 bam BRADO1769 - amidase 1658 67.30 0 1893491..1894909 - 472 146338833 - BRADO1770 - putative peptidase M20D, amidohydrolase; putative aminobenzoyl-glutamate utilization protein 1659 62.60 0 1895211..1895456 + 81 146338834 - BRADO1771 - putative signal peptide 1660 66.67 0 1895461..1895649 - 62 146338835 - BRADO1772 - hypothetical protein 1661 64.74 0 1895702..1895857 - 51 146338836 - BRADO1773 - putative signal peptide 1662 65.63 0 1895991..1896569 + 192 146338837 norE BRADO1774 - NorE protein involved in nitric oxide reduction (cytochrome c oxidase subunit III-like protein) 1663 65.53 0 1896573..1896836 + 87 146338838 - BRADO1775 - putative signal peptide 1664 65.34 0 1896939..1897391 + 150 146338839 norC BRADO1776 - nitric-oxide reductase subunit C (nitric oxide reductase cytochrome c subunit) (NOR small subunit) 1665 63.10 0 1897431..1898777 + 448 146338840 norB BRADO1777 - nitric-oxide reductase subunit B (nitric oxide reductase cytochrome b subunit) (NOR large subunit) 1666 67.28 0 1898838..1899647 + 269 146338841 norQ BRADO1778 - NorD protein required for nitric oxide reductase (Nor) activity (putative chaperone, ATPase) 1667 68.39 0 1899651..1901564 + 637 146338842 norD BRADO1779 - NorD protein required for nitric oxide reductase (Nor) activity 1668 66.21 0 1901576..1902010 - 144 146338843 - BRADO1780 - hypothetical protein 1669 56.38 -2 1902402..1902644 + 80 146338844 - BRADO1781 - hypothetical protein 1670 66.67 0 1902950..1903948 + 332 146338845 - BRADO1782 - N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) 1671 64.20 0 1904925..1905086 + 53 146338846 - BRADO1785 - hypothetical protein 1672 67.46 0 1905355..1905984 - 209 146338847 upp BRADO1786 - uracil phosphoribosyltransferase 1673 68.95 0 1906255..1907478 - 407 146338848 - BRADO1787 - hypothetical protein 1674 67.30 0 1907495..1908751 - 418 146338849 - BRADO1788 - hypothetical protein 1675 66.82 0 1908908..1910236 + 442 146338850 - BRADO1789 - putative N-isopropylammelide isopropylaminohydrolase 1676 65.05 0 1910427..1911353 + 308 146338851 - BRADO1790 - N-carbamoyl-D-amino acid hydrolase (D-N-alpha-carbamilase) 1677 70.11 +1 1911577..1912215 - 212 146338852 - BRADO1791 - putative Hydantoin racemase HyuA 1678 66.67 0 1912364..1913833 + 489 146338853 hyuA BRADO1792 - dihydropyrimidinase 1679 68.42 0 1914006..1914977 + 323 146338854 - BRADO1793 - putative UDP-glucose 4-epimerase 1680 70.34 +1 1914979..1915740 + 253 146338855 - BRADO1794 - short chain dehydrogenase 1681 70.01 +1 1915893..1916789 - 298 146338856 - BRADO1795 - LysR family transcriptional regulator 1682 64.65 0 1916979..1918415 + 478 146338857 - BRADO1796 - oxidoreductase 1683 62.96 0 1918506..1920125 + 539 146338858 - BRADO1797 - putative ABC transporter substrate-binding protein 1684 66.76 0 1920444..1921475 + 343 146338859 - BRADO1798 - oligopeptide ABC transporter membrane protein 1685 68.29 0 1921478..1922338 + 286 146338860 - BRADO1799 - peptide ABC transporter membrane protein 1686 68.18 0 1922398..1924047 + 549 146338861 - BRADO1800 - oligopeptide ABC transporter ATP-binding protein 1687 68.64 0 1924169..1925584 + 471 146338862 - BRADO1801 - putative D-lactate dehydrogenase 1688 65.07 0 1925600..1926976 - 458 146338863 - BRADO1802 - hypothetical protein 1689 66.83 0 1927315..1928511 + 398 146338864 uxuA BRADO1803 - mannonate hydrolase 1690 69.28 +1 1928564..1929595 + 343 146338865 idnD BRADO1804 - L-idonate 5-dehydrogenase, NAD-binding 1691 70.23 +1 1929643..1930539 + 298 146338866 kdgK BRADO1805 - ketodeoxygluconokinase 1692 69.46 +1 1930536..1931180 + 214 146338867 eda BRADO1806 - KHG/KDPG aldolase 1693 64.61 0 1931486..1932409 + 307 146338868 ytfQ BRADO1807 - ABC transporter periplasmic-binding protein ytfQ precursor 1694 68.28 0 1932619..1934169 + 516 146338869 - BRADO1808 - putative ABC transporter ATP-binding protein 1695 69.79 +1 1934166..1935158 + 330 146338870 ytfT BRADO1809 - sugar ABC transporter membrane protein 1696 65.48 0 1935155..1936165 + 336 146338871 - BRADO1810 - inner membrane ABC transporter permease protein YjfF 1697 68.28 0 1936162..1936905 + 247 146338872 - BRADO1811 - GntR family transcriptional regulator 1698 67.03 0 1936965..1938638 + 557 146338873 - BRADO1812 - dihydroxy-acid dehydratase 1699 66.67 0 1938642..1939577 + 311 146338874 - BRADO1813 - dihydrodipicolinate synthase 1700 68.82 0 1939581..1940507 + 308 146338875 - BRADO1814 - galactose 1-dehydrogenase 1701 67.13 0 1940511..1941590 + 359 146338876 - BRADO1815 - galactose mutarotase 1702 68.71 0 1941590..1942471 + 293 146338877 - BRADO1816 - putative gluconolactonase 1703 63.31 0 1942580..1943650 + 356 146338878 chvE BRADO1817 - multiple sugar-binding periplasmic receptor chvE precursor 1704 64.07 0 1943742..1945319 + 525 146338879 araG BRADO1818 - L-arabinose transport ATP-binding protein araG 1705 64.65 0 1945341..1946531 + 396 146338880 - BRADO1819 - putative L-arabinose transport system permease protein araH 1706 65.11 0 1947128..1947448 + 106 146338881 - BRADO1820 - putative anti-sigma factor antagonist 1707 60.11 -1 1947450..1947815 + 121 146338882 cheY BRADO1821 - chemotaxis protein cheY 1708 65.35 0 1947806..1949860 + 684 146338883 cheA BRADO1822 - chemotaxis protein cheA 1709 63.65 0 1949850..1950380 + 176 146338884 cheW BRADO1823 - chemotaxis protein cheW 1710 65.69 0 1950439..1952802 + 787 146338885 - BRADO1824 - methyl-accepting chemotaxis protein 1711 60.61 -1 1952861..1953685 + 274 146338886 cheR BRADO1825 - chemotaxis protein methyltransferase 1712 63.86 0 1953682..1954323 + 213 146338887 cheD BRADO1826 - chemotaxis protein cheD 1713 66.57 0 1954334..1955392 + 352 146338888 cheB BRADO1827 - chemotaxis response regulator protein CheB-glutamate methylesterase 1714 63.86 0 1955630..1956520 + 296 146338889 - BRADO1828 - hypothetical protein 1715 60.67 -1 1956530..1956829 + 99 146338890 - BRADO1829 - putative anti-sigma factor antagonist 1716 68.55 0 1956836..1957471 + 211 146338891 - BRADO1830 - hypothetical protein 1717 65.70 0 1957516..1958757 + 413 146338892 - BRADO1831 - putative response regulator, putative serine phosphatase 1718 66.67 0 1958777..1959115 + 112 146338893 - BRADO1832 - hypothetical protein 1719 64.64 0 1959112..1961475 + 787 146338894 - BRADO1833 - hypothetical protein 1720 66.03 0 1961758..1963179 + 473 146338895 - BRADO1834 - hypothetical protein 1721 61.44 -1 1963194..1963346 + 50 146338896 - BRADO1835 - hypothetical protein 1722 69.08 0 1963483..1965099 - 538 146338897 - BRADO1836 - putative thiosulfate sulfurtransferase 1723 66.67 0 1965059..1965646 - 195 146338898 - BRADO1837 - hypothetical protein 1724 66.47 0 1965949..1966467 - 172 146338899 - BRADO1839 - hypothetical protein 1725 65.86 0 1966470..1966841 - 123 146338900 - BRADO1840 - hypothetical protein 1726 66.89 0 1967009..1967452 - 147 146338901 - BRADO1841 - hypothetical protein 1727 69.29 +1 1967633..1969159 + 508 146338902 - BRADO1842 - putative amine oxidase 1728 65.48 0 1969221..1970903 + 560 146338903 - BRADO1843 - ATPase 1729 64.65 0 1970909..1971553 - 214 146338904 - BRADO1844 - putative glutathione S-transferase 1730 63.56 0 1971746..1972195 + 149 146338905 - BRADO1845 - hypothetical protein 1731 61.25 -1 1972518..1972757 - 79 146338906 - BRADO1846 - hypothetical protein 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
version
1.0