version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1545 70.87 +1 1770677..1771318 + 213 146338720 bchJ BRADO1653 - 4-vinyl protochlorophyllide reductase 1546 67.32 0 1771367..1772287 - 306 146338721 cbbR BRADO1654 - RuBisCO operon transcriptional regulatory protein 1547 67.51 0 1772435..1773505 + 356 146338722 cbbF BRADO1655 - D-fructose-1,6-bisphosphatase protein 1548 60.84 -1 1773555..1774430 + 291 146338723 cbbP BRADO1656 - phosphoribulokinase (phosphopentokinase) (PRKase) (PRK) 1549 67.66 0 1774442..1776454 + 670 146338724 cbbT BRADO1657 - transketolase 1550 65.74 0 1776498..1777580 + 360 146338725 cbbA BRADO1658 - fructose-1,6-bisphosphate aldolase 1551 64.41 0 1777615..1779075 + 486 146338726 rbcL BRADO1659 - ribulose bisophosphate carboxylase 1552 62.14 -1 1779148..1779567 + 139 146338727 cbbS BRADO1660 - ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) 1553 62.95 0 1779730..1780671 + 313 146338728 - BRADO1661 - CbbX-like protein 1554 66.80 0 1780668..1781393 + 241 146338729 - BRADO1662 - haloacid dehalogenase-like hydrolase 1555 66.81 0 1781544..1782233 + 229 146338730 - BRADO1663 - TetR family transcriptional regulator 1556 66.85 0 1782329..1782880 - 183 146338731 - BRADO1664 - hypothetical protein 1557 69.67 +1 1783291..1784055 + 254 146338732 - BRADO1665 - putative lytic murein transglycosylase 1558 66.80 0 1784144..1786324 - 726 146338733 katG BRADO1666 - catalase; hydroperoxidase HPI(I) 1559 69.14 +1 1786553..1787482 + 309 146338734 oxyR BRADO1667 - oxidative stress transcriptional regulator 1560 70.83 +1 1787972..1788427 + 151 146338735 - BRADO1668 - putative signal peptide 1561 63.65 0 1788603..1789199 + 198 146338736 - BRADO1669 - hypothetical protein 1562 70.68 +1 1789196..1789444 + 82 146338737 - BRADO1670 - hypothetical protein 1563 58.20 -2 1789497..1789685 + 62 146338738 - BRADO1671 - hypothetical protein 1564 67.28 0 1789869..1790192 + 107 146338739 - BRADO1672 - hypothetical protein 1565 62.91 0 1791148..1792158 + 336 146338740 pstS BRADO1674 - high-affinity phosphate ABC transporter periplasmic substrate-binding protein 1566 63.66 0 1792222..1793253 + 343 146338741 pstC BRADO1675 - high-affinity phosphate ABC transporter membrane protein 1567 65.64 0 1793258..1794133 + 291 146338742 pstA BRADO1676 - high-affinity phosphate ABC transporter membrane protein 1568 63.55 0 1794151..1794951 + 266 146338743 pstB BRADO1677 - high-affinity phosphate ABC transporter ATP-binding protein 1569 64.16 0 1794982..1795698 + 238 146338744 phoU BRADO1678 - transcriptional repressor for high-affinity phosphate uptake 1570 69.07 0 1795715..1796422 + 235 146338745 phoB BRADO1679 - two-component regulatory system response regulator 1571 67.43 0 1796509..1797825 + 438 146338746 - BRADO1680 - hypothetical protein 1572 67.75 0 1798094..1799110 + 338 146338747 hupN BRADO1681 - hydrogenase nickel incorporation protein hupN 1573 67.65 0 1799141..1800157 + 338 146338748 hupU BRADO1682 - uptake hydrogenase accessory protein HupU 1574 67.50 0 1800154..1801593 + 479 146338749 hupV BRADO1683 - uptake hydrogenase accessory protein HupV 1575 64.75 0 1801818..1802915 + 365 146338750 hupS BRADO1684 - uptake hydrogenase small subunit 1576 62.98 0 1802937..1804727 + 596 146338751 hupL BRADO1685 - uptake hydrogenase large subunit precursor 1577 62.37 -1 1804741..1805484 + 247 146338752 hupC BRADO1686 - Ni/Fe-hydrogenase, 1 b-type cytochrome subunit 1578 65.13 0 1805497..1806081 + 194 146338753 hupD BRADO1687 - hydrogenase maturation protein hupD 1579 65.98 0 1806106..1806396 + 96 146338754 hupF BRADO1688 - hydrogenase expression/formation protein HupF 1580 66.44 0 1806631..1807077 + 148 146338755 hupG BRADO1689 - hydrogenase expression/formation protein hupG 1581 68.40 0 1807074..1807937 + 287 146338756 hupH BRADO1690 - hydrogenase expression/formation protein hupH 1582 65.73 0 1807934..1808146 + 70 146338757 hupI BRADO1691 - rubredoxin hupI 1583 69.28 +1 1808143..1808640 + 165 146338758 hupJ BRADO1692 - hydrogenase expression/formation protein hupJ 1584 68.58 0 1808637..1809734 + 365 146338759 hupK BRADO1693 - hydrogenase expression/formation protein hupK 1585 67.25 0 1809727..1810068 + 113 146338760 hypA BRADO1694 - hydrogenase expression/formation protein HypA 1586 59.03 -2 1810011..1810298 - 95 146338761 - BRADO1695 - hypothetical protein 1587 62.65 0 1810437..1811033 + 198 146338762 hypB BRADO1696 - hydrogenase-3 accessory protein 1588 67.33 0 1811030..1813288 + 752 146338763 hypF BRADO1697 - carbamoyl phosphate phosphatase, [NiFe] hydrogenase maturation protein 1589 64.32 0 1813312..1813524 + 70 146338764 hypC BRADO1698 - hydrogenase expression/formation protein HypC 1590 65.69 0 1813521..1814648 + 375 146338765 hypD BRADO1699 - hydrogenase expression/formation protein 1591 66.09 0 1814645..1815685 + 346 146338766 hypE BRADO1700 - hydrogenase maturation protein HypE 1592 64.81 0 1815694..1817151 + 485 146338767 hoxA BRADO1701 - two component sigma-54-dependent hydrogenase Fis family transcriptional regulator 1593 63.66 0 1817126..1818490 + 454 146338768 - BRADO1702 - sensor histidine kinase 1594 64.58 0 1818502..1819362 - 286 146338769 - BRADO1703 - putative transport protein, yfdC-like 1595 67.50 0 1819492..1820214 - 240 146338770 - BRADO1704 - GntR family transcriptional regulator 1596 65.55 0 1820278..1820991 - 237 146338771 - BRADO1705 - GntR family transcriptional regulator 1597 65.26 0 1821223..1821648 + 141 146338772 - BRADO1706 - hypothetical protein 1598 64.19 0 1821733..1823511 + 592 146338773 - BRADO1707 - putative quinoprotein ethanol dehydrogenase 1599 66.06 0 1823609..1824106 + 165 146338774 - BRADO1708 - putative cytochrome c region 1600 63.98 0 1824103..1824735 + 210 146338775 - BRADO1709 - hypothetical protein 1601 61.46 -1 1824866..1824961 + 31 146338776 - BRADO1710 - coenzyme PQQ synthesis protein A (pyrroloquinoline quinone biosynthesis protein A) 1602 63.19 0 1825209..1825640 + 143 146338777 - BRADO1711 - putative isoquinoline 1-oxidoreductase alpha subunit, iorA-like 1603 67.45 0 1825649..1827934 + 761 146338778 - BRADO1712 - putative isoquinoline 1-oxidoreductase beta subunit, iorB-like 1604 62.76 0 1828428..1829450 + 340 146338779 - BRADO1713 - putative TRAP-type C4-dicarboxylate transport system, periplasmic component (dctP-like) 1605 67.04 0 1829479..1831362 + 627 146338780 - BRADO1714 - TRAP-type C4-dicarboxylate transporter small and large permease 1606 65.18 0 1831397..1832947 + 516 146338781 - BRADO1715 - putative long-chain-fatty-acid--CoA ligase 1607 66.56 0 1832990..1833928 + 312 146338782 - BRADO1716 - putative transporter (permease); putative malonate transporter 1608 69.29 +1 1833954..1835666 + 570 146338783 - BRADO1717 - putative acetolactate synthase (acetohydroxy-acid synthase) (ALS), TPP-requiring enzyme 1609 65.90 0 1835680..1836987 - 435 146338784 - BRADO1718 - major facilitator superfamily sugar transporter permease 1610 65.99 0 1837138..1838313 + 391 146338785 cyoA BRADO1719 - cytochrome o ubiquinol oxidase subunit II (ubiquinol oxidase chain B) 1611 61.99 -1 1838324..1840333 + 669 146338786 cyoB BRADO1720 - cytochrome o ubiquinol oxidase, subunit I (ubiquinol oxidase chain A) 1612 62.22 -1 1840330..1840959 + 209 146338787 cyoC BRADO1721 - cytochrome o ubiquinol oxidase subunit III (ubiquinol oxidase chain C) 1613 62.37 -1 1840956..1841327 + 123 146338788 cyoD BRADO1722 - cytochrome o ubiquinol oxidase, subunit IV (ubiquinol oxidase chain D) 1614 69.65 +1 1841327..1842163 + 278 146338789 - BRADO1723 - putative SURF1 family protein 1615 66.45 0 1842168..1843562 + 464 146338790 regB BRADO1724 - two-component sensor histidine kinase; putative photosynthetic apparatus regulatory protein regB (PrrB protein) 1616 62.92 0 1843552..1844085 + 177 146338791 regA BRADO1725 - two-component response regulator; putative photosynthetic apparatus regulatory protein regA 1617 69.02 0 1844098..1845372 - 424 146338792 - BRADO1726 - hypothetical protein 1618 65.72 0 1845465..1848542 - 1025 146338793 - BRADO1727 - RND family mulitdrug efflux protein 1619 67.78 0 1848539..1849615 - 358 146338794 - BRADO1728 - RND family mulitdrug efflux protein 1620 67.20 0 1849612..1850733 - 373 146338795 - BRADO1729 - RND family mulitdrug efflux protein 1621 70.13 +1 1851052..1851687 + 211 146338796 - BRADO1730 - TetR family transcriptional regulator 1622 65.67 0 1851721..1852422 - 233 146338797 - BRADO1731 - hypothetical protein 1623 64.31 0 1852419..1852715 - 98 146338798 - BRADO1732 - hypothetical protein 1624 64.90 0 1853928..1855115 - 395 146338799 - BRADO1733 - putative cytochrome c region 1625 73.86 +2 1855588..1855851 + 87 146338800 - BRADO1734 - hypothetical protein 1626 67.38 0 1855869..1857266 - 465 146338801 - BRADO1735 - purine permease 1627 69.47 +1 1857301..1860015 - 904 146338802 - BRADO1736 - putative xanthine dehydrogenase family protein; putative hypoxanthine oxidase 1628 68.11 0 1860012..1860845 - 277 146338803 - BRADO1737 - putative oxidoreductase (FAD binding) 1629 69.56 +1 1860980..1862329 + 449 146338804 - BRADO1738 - hydroxydechloroatrazine ethylaminohydrolase 1630 69.73 +1 1862336..1863313 - 325 146338805 dppF BRADO1739 - dipeptide transporter ATP-binding subunit 1631 68.89 0 1863310..1864344 - 344 146338806 dppD BRADO1740 - peptide ABC transporter ATP-binding protein 1632 68.42 0 1864372..1865283 - 303 146338807 dppC BRADO1741 - peptide ABC transporter permease 1633 64.19 0 1865280..1866290 - 336 146338808 dppB BRADO1742 - peptide ABC transporter permease 1634 61.16 -1 1866415..1868013 - 532 146338809 dppA BRADO1743 - periplasmic dipeptide transport protein precursor (dipeptide-binding protein) (DBP) (ABC transporter) 1635 62.96 0 1868298..1869377 - 359 146338810 - BRADO1744 - putative ABC transporter (substrate-binding protein) 1636 69.62 +1 1869459..1870373 - 304 146338811 - BRADO1745 - ABC transporter permease 1637 65.47 0 1870363..1871451 - 362 146338812 - BRADO1746 - ABC transporter permease 1638 66.73 0 1871435..1873003 - 522 146338813 - BRADO1747 - putative ABC transporter ATP-binding protein 1639 62.95 0 1873571..1874701 + 376 146338814 - BRADO1748 - putative signal peptide 1640 66.90 0 1874763..1875182 - 139 146338815 - BRADO1749 - putative cytidine and deoxycytidylate deaminase zinc-binding protein 1641 66.46 0 1875397..1876356 + 319 146338816 - BRADO1750 - putative cation-efflux pump 1642 62.08 -1 1876364..1876603 - 79 146338817 - BRADO1751 - hypothetical protein 1643 69.74 +1 1876665..1877804 - 379 146338818 - BRADO1752 - putative transport protein (permease) 1644 70.17 +1 1878003..1878944 + 313 146338819 dgoK BRADO1753 - 2-dehydro-3-deoxygalactonokinase (2-keto-3-deoxy-galactonokinase) (2-oxo-3-deoxygalactonate kinase) 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0