version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 1502 67.77 0 1723037..1723942 + 301 146338677 - BRADO1609 - putative Alpha/beta hydrolase, putative protoporphyrin IX magnesium chelatase bchO-like. 1503 66.21 0 1723993..1725531 + 512 146338678 crtI BRADO1610 - phytoene dehydrogenase (phytoene desaturase) 1504 70.89 +1 1725528..1726568 + 346 146338679 crtB BRADO1611 - phytoene synthase 1505 69.44 +1 1726591..1726734 + 47 146338680 - BRADO1612 - hypothetical protein 1506 69.50 +1 1727206..1727910 - 234 146338681 crtC BRADO1613 - neurosporene and anhydrorhodovibrin hydratase 1507 69.85 +1 1728066..1729604 - 512 146338682 crtD BRADO1614 - hydroxyneurosporene and rhodopin dehydrogenase 1508 71.03 +1 1729716..1730585 + 289 146338683 crtE BRADO1615 - geranylgeranyl pyrophosphate synthetase (GGPP synthetase) (farnesyltranstransferase) 1509 70.24 +1 1730820..1731965 + 381 146338684 crtF BRADO1616 - demethylspheroidene and didehydrorhodopin O-methyltransferase 1510 68.47 0 1732056..1732997 + 313 146338685 bchC BRADO1617 - 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase 1511 65.38 0 1732994..1734004 + 336 146338686 bchX BRADO1618 - bacteriochlorophyllide reductase subunit 1512 69.82 +1 1734008..1735594 + 528 146338687 bchY BRADO1619 - bacteriochlorophyllide reductase subunit 1513 67.01 0 1735594..1737045 + 483 146338688 bchZ BRADO1620 - bacteriochlorophyllide reductase Z subunit 1514 67.54 0 1737077..1737304 + 75 146338689 - BRADO1621 - hypothetical protein 1515 61.84 -1 1737475..1737702 + 75 146338690 pufB BRADO1622 - light harvesting 1 beta subunit 1516 60.32 -1 1737719..1737907 + 62 146338691 pufA BRADO1623 - light harvesting 1 alpha subunit 1517 62.16 -1 1738088..1738930 + 280 146338692 pufL BRADO1624 - photosynthetic reaction center subunit L 1518 63.43 0 1738949..1739875 + 308 146338693 pufM BRADO1625 - photosynthetic reaction center M protein 1519 66.96 0 1739894..1740577 + 227 146338694 hmuO BRADO1626 - heme oxygenase 1520 64.09 0 1740791..1742149 - 452 146338695 - BRADO1627 - putative transposase 1521 68.00 0 1742399..1744573 - 724 146338696 BrbphP BRADO1628 - bacteriophytochrome 1522 66.30 0 1744574..1745944 - 456 146338697 ppsR2 BRADO1629 - transcriptional regulator PpsR2 1523 61.15 -1 1746273..1746707 + 144 146338698 cycA BRADO1630 - cytochrome c2 1524 67.42 0 1746962..1747228 - 88 146338699 - BRADO1631 - hypothetical protein 1525 68.33 0 1747237..1748442 - 401 146338700 bchP BRADO1632 - geranylgeranyl reductase 1526 69.59 +1 1748445..1749776 - 443 146338701 - BRADO1633 - light harvesting pigment major facilitator family (MFS) transporter, Bch2-like 1527 69.58 +1 1749773..1750699 - 308 146338702 bchG BRADO1634 - bacteriochlorophyll/chlorophyll a synthase 1528 65.62 0 1750716..1752143 - 475 146338703 ppsR1 BRADO1635 - Fis family transcriptional regulator 1529 63.66 0 1752223..1753119 - 298 146338704 - BRADO1636 - regulatory protein 1530 62.44 -1 1753349..1753939 + 196 146338705 bchF BRADO1638 - 2-vinyl bacteriochlorophyllide hydratase 1531 68.69 0 1753936..1755219 + 427 146338706 bchN BRADO1639 - light-independent protochlorophyllide reductase subunit N 1532 66.60 0 1755221..1756777 + 518 146338707 bchB BRADO1640 - light-independent protochlorophyllide reductase subunit B 1533 68.78 0 1756752..1760342 + 1196 146338708 bchH BRADO1641 - magnesium chelatase subunit H 1534 65.78 0 1760339..1761244 + 301 146338709 chlL BRADO1642 - protochlorophyllide reductase iron-sulfur ATP-binding protein 1535 68.38 0 1761258..1761959 + 233 146338710 bchM BRADO1643 - Mg-protoporphyrin IX methyl transferase 1536 68.13 0 1761956..1763386 + 476 146338711 lhaA BRADO1644 - photosynthetic complex (LH1) assembly protein LhaA 1537 64.23 0 1763406..1764185 + 259 146338712 puhA BRADO1645 - reaction center protein H chain (photosynthetic reaction center H subunit) 1538 69.12 +1 1764182..1764832 + 216 146338713 - BRADO1646 - hypothetical protein 1539 68.50 0 1764846..1765337 + 163 146338714 - BRADO1647 - hypothetical protein 1540 62.75 0 1765334..1765639 + 101 146338715 - BRADO1648 - hypothetical protein 1541 61.77 -1 1765636..1766697 + 353 146338716 acsF BRADO1649 - magnesium-protoporphyrin IX monomethyl ester cyclase 1542 69.79 +1 1766711..1767766 + 351 146338717 - BRADO1650 - hypothetical protein 1543 67.00 0 1767763..1768974 + 403 146338718 hemA BRADO1651 - 5-aminolevulinate synthase 1544 63.93 0 1769071..1770675 + 534 146338719 bchE BRADO1652 - Mg-protoporphyrin IX monomethyl ester oxidative cyclase 66kD subunit 1545 70.87 +1 1770677..1771318 + 213 146338720 bchJ BRADO1653 - 4-vinyl protochlorophyllide reductase 1546 67.32 0 1771367..1772287 - 306 146338721 cbbR BRADO1654 - RuBisCO operon transcriptional regulatory protein 1547 67.51 0 1772435..1773505 + 356 146338722 cbbF BRADO1655 - D-fructose-1,6-bisphosphatase protein 1548 60.84 -1 1773555..1774430 + 291 146338723 cbbP BRADO1656 - phosphoribulokinase (phosphopentokinase) (PRKase) (PRK) 1549 67.66 0 1774442..1776454 + 670 146338724 cbbT BRADO1657 - transketolase 1550 65.74 0 1776498..1777580 + 360 146338725 cbbA BRADO1658 - fructose-1,6-bisphosphate aldolase 1551 64.41 0 1777615..1779075 + 486 146338726 rbcL BRADO1659 - ribulose bisophosphate carboxylase 1552 62.14 -1 1779148..1779567 + 139 146338727 cbbS BRADO1660 - ribulose bisphosphate carboxylase small chain (RuBisCO small subunit) 1553 62.95 0 1779730..1780671 + 313 146338728 - BRADO1661 - CbbX-like protein 1554 66.80 0 1780668..1781393 + 241 146338729 - BRADO1662 - haloacid dehalogenase-like hydrolase 1555 66.81 0 1781544..1782233 + 229 146338730 - BRADO1663 - TetR family transcriptional regulator 1556 66.85 0 1782329..1782880 - 183 146338731 - BRADO1664 - hypothetical protein 1557 69.67 +1 1783291..1784055 + 254 146338732 - BRADO1665 - putative lytic murein transglycosylase 1558 66.80 0 1784144..1786324 - 726 146338733 katG BRADO1666 - catalase; hydroperoxidase HPI(I) 1559 69.14 +1 1786553..1787482 + 309 146338734 oxyR BRADO1667 - oxidative stress transcriptional regulator 1560 70.83 +1 1787972..1788427 + 151 146338735 - BRADO1668 - putative signal peptide 1561 63.65 0 1788603..1789199 + 198 146338736 - BRADO1669 - hypothetical protein 1562 70.68 +1 1789196..1789444 + 82 146338737 - BRADO1670 - hypothetical protein 1563 58.20 -2 1789497..1789685 + 62 146338738 - BRADO1671 - hypothetical protein 1564 67.28 0 1789869..1790192 + 107 146338739 - BRADO1672 - hypothetical protein 1565 62.91 0 1791148..1792158 + 336 146338740 pstS BRADO1674 - high-affinity phosphate ABC transporter periplasmic substrate-binding protein 1566 63.66 0 1792222..1793253 + 343 146338741 pstC BRADO1675 - high-affinity phosphate ABC transporter membrane protein 1567 65.64 0 1793258..1794133 + 291 146338742 pstA BRADO1676 - high-affinity phosphate ABC transporter membrane protein 1568 63.55 0 1794151..1794951 + 266 146338743 pstB BRADO1677 - high-affinity phosphate ABC transporter ATP-binding protein 1569 64.16 0 1794982..1795698 + 238 146338744 phoU BRADO1678 - transcriptional repressor for high-affinity phosphate uptake 1570 69.07 0 1795715..1796422 + 235 146338745 phoB BRADO1679 - two-component regulatory system response regulator 1571 67.43 0 1796509..1797825 + 438 146338746 - BRADO1680 - hypothetical protein 1572 67.75 0 1798094..1799110 + 338 146338747 hupN BRADO1681 - hydrogenase nickel incorporation protein hupN 1573 67.65 0 1799141..1800157 + 338 146338748 hupU BRADO1682 - uptake hydrogenase accessory protein HupU 1574 67.50 0 1800154..1801593 + 479 146338749 hupV BRADO1683 - uptake hydrogenase accessory protein HupV 1575 64.75 0 1801818..1802915 + 365 146338750 hupS BRADO1684 - uptake hydrogenase small subunit 1576 62.98 0 1802937..1804727 + 596 146338751 hupL BRADO1685 - uptake hydrogenase large subunit precursor 1577 62.37 -1 1804741..1805484 + 247 146338752 hupC BRADO1686 - Ni/Fe-hydrogenase, 1 b-type cytochrome subunit 1578 65.13 0 1805497..1806081 + 194 146338753 hupD BRADO1687 - hydrogenase maturation protein hupD 1579 65.98 0 1806106..1806396 + 96 146338754 hupF BRADO1688 - hydrogenase expression/formation protein HupF 1580 66.44 0 1806631..1807077 + 148 146338755 hupG BRADO1689 - hydrogenase expression/formation protein hupG 1581 68.40 0 1807074..1807937 + 287 146338756 hupH BRADO1690 - hydrogenase expression/formation protein hupH 1582 65.73 0 1807934..1808146 + 70 146338757 hupI BRADO1691 - rubredoxin hupI 1583 69.28 +1 1808143..1808640 + 165 146338758 hupJ BRADO1692 - hydrogenase expression/formation protein hupJ 1584 68.58 0 1808637..1809734 + 365 146338759 hupK BRADO1693 - hydrogenase expression/formation protein hupK 1585 67.25 0 1809727..1810068 + 113 146338760 hypA BRADO1694 - hydrogenase expression/formation protein HypA 1586 59.03 -2 1810011..1810298 - 95 146338761 - BRADO1695 - hypothetical protein 1587 62.65 0 1810437..1811033 + 198 146338762 hypB BRADO1696 - hydrogenase-3 accessory protein 1588 67.33 0 1811030..1813288 + 752 146338763 hypF BRADO1697 - carbamoyl phosphate phosphatase, [NiFe] hydrogenase maturation protein 1589 64.32 0 1813312..1813524 + 70 146338764 hypC BRADO1698 - hydrogenase expression/formation protein HypC 1590 65.69 0 1813521..1814648 + 375 146338765 hypD BRADO1699 - hydrogenase expression/formation protein 1591 66.09 0 1814645..1815685 + 346 146338766 hypE BRADO1700 - hydrogenase maturation protein HypE 1592 64.81 0 1815694..1817151 + 485 146338767 hoxA BRADO1701 - two component sigma-54-dependent hydrogenase Fis family transcriptional regulator 1593 63.66 0 1817126..1818490 + 454 146338768 - BRADO1702 - sensor histidine kinase 1594 64.58 0 1818502..1819362 - 286 146338769 - BRADO1703 - putative transport protein, yfdC-like 1595 67.50 0 1819492..1820214 - 240 146338770 - BRADO1704 - GntR family transcriptional regulator 1596 65.55 0 1820278..1820991 - 237 146338771 - BRADO1705 - GntR family transcriptional regulator 1597 65.26 0 1821223..1821648 + 141 146338772 - BRADO1706 - hypothetical protein 1598 64.19 0 1821733..1823511 + 592 146338773 - BRADO1707 - putative quinoprotein ethanol dehydrogenase 1599 66.06 0 1823609..1824106 + 165 146338774 - BRADO1708 - putative cytochrome c region 1600 63.98 0 1824103..1824735 + 210 146338775 - BRADO1709 - hypothetical protein 1601 61.46 -1 1824866..1824961 + 31 146338776 - BRADO1710 - coenzyme PQQ synthesis protein A (pyrroloquinoline quinone biosynthesis protein A) 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.
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1.0