version 1.0
Bradyrhizobium sp. ORS278, complete genome - 1..7456587 6717 proteins Pos %G+C SD Location Strand Length PID Gene Synonym Code Product 81 69.53 +1 95216..98362 + 1048 146337256 - BRADO0083 - helicase-exonuclease type V family protein AddB subunit 82 68.74 0 98359..101829 + 1156 146337257 - BRADO0084 - helicase-exonuclease type V family protein AddA subunit 83 65.43 0 101929..102252 + 107 146337258 trxA BRADO0085 - thioredoxin 1, redox factor 84 67.06 0 102527..103540 + 337 146337259 ligC BRADO0086 - ATP-dependent DNA ligase 85 64.78 0 103541..104281 - 246 146337260 - BRADO0087 - putative phosphoesterase 86 66.22 0 104295..105638 - 447 146337261 - BRADO0088 - folC bifunctional protein 87 67.31 0 105635..106573 - 312 146337262 accD BRADO0089 - acetyl-CoA carboxylase subunit beta 88 68.94 0 106668..107504 - 278 146337263 trpA BRADO0090 - tryptophan synthase subunit alpha 89 65.03 0 107501..108724 - 407 146337264 trpB BRADO0091 - tryptophan synthase subunit beta 90 65.45 0 108721..109380 - 219 146337265 trpF BRADO0092 - N-(5'-phosphoribosyl)anthranilate isomerase 91 67.94 0 109459..109851 - 130 146337266 - BRADO0093 - putative signal peptide 92 63.52 0 109930..110247 - 105 146337267 ihfB BRADO0094 - integration host factor subunit beta 93 65.44 0 110415..111395 - 326 146337268 - BRADO0095 - S49 family peptidase 94 62.87 0 111819..113528 - 569 146337269 rpsA BRADO0096 - 30S ribosomal protein S1 95 66.67 0 113798..114436 - 212 146337270 cmk BRADO0097 - cytidylate kinase (CK) (cytidine monophosphate kinase) (CMP kinase) 96 69.28 +1 114433..115770 - 445 146337271 aroA BRADO0098 - 3-phosphoshikimate 1-carboxyvinyltransferase 97 64.44 0 115920..116324 + 134 146337272 - BRADO0099 - hypothetical protein 98 60.32 -1 116707..116958 + 83 146337273 - BRADO0100 - excinuclease ABC subunit C 99 66.45 0 116966..117421 - 151 146337274 ohrR BRADO0101 - organic hydroperoxide resistance transcriptional regulator 100 68.78 0 117594..118019 + 141 146337275 ohr BRADO0102 - organic hydroperoxide resistance protein 101 66.67 0 118176..119378 + 400 146337276 - BRADO0103 - putative caiB/baiF CoA-transferase family protein; putative Formyl-CoA transferase 102 62.88 0 119646..120887 + 413 146337277 - BRADO0104 - putative sugar ABC transporter (substrate binding protein); putative glycerol 3-phosphate transport protein, ugpB-like protein 103 63.72 0 120959..121840 + 293 146337278 - BRADO0105 - putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpA-like protein 104 62.90 0 121840..122688 + 282 146337279 - BRADO0106 - putative sugar ABC transporter (permease protein); putative glycerol 3-phosphate transport protein, ugpE-like protein 105 66.67 0 122800..123879 + 359 146337280 - BRADO0107 - glycerol-3-phosphate transporter ATP-binding subunit 106 60.33 -1 124014..124439 + 141 146337281 - BRADO0108 - putative small heat shock protein; putative HSP20-like chaperone 107 64.77 0 124498..124761 + 87 146337282 - BRADO0109 - hypothetical protein 108 67.06 0 124912..125421 + 169 146337283 - BRADO0110 - GNAT family acetyltransferase 109 68.40 0 125439..125900 - 153 146337284 ptsN BRADO0111 - nitrogen regulatory protein 110 64.18 0 126231..126833 - 200 146337285 - BRADO0112 - sigma-54 modulation protein 111 65.39 0 126924..128564 - 546 146337286 rpoN BRADO0113 - RNA polymerase factor sigma-54 112 68.00 0 128776..129825 - 349 146337287 - BRADO0114 - putative ABC transporter ATP-binding protein 113 69.53 +1 130189..130887 - 232 146337288 - BRADO0115 - putative OstA-like protein 114 64.56 0 130892..131602 - 236 146337289 - BRADO0116 - hypothetical protein 115 64.72 0 131761..132375 - 204 146337290 - BRADO0117 - putative 3'-5' exonuclease family protein 116 64.81 0 132868..133839 + 323 146337291 - BRADO0118 - putative TRAP-type C4-dicarboxylate transport system, binding periplasmic protein (DctP subunit) 117 62.27 -1 133948..134493 + 181 146337292 - BRADO0119 - putative TRAP-type C4-dicarboxylate transport system, small permease component (dctQ subunit) 118 64.19 0 134484..135776 + 430 146337293 - BRADO0120 - putative TRAP-type C4-dicarboxylate transport system, large permease component (dctM subunit) 119 66.80 0 136094..136858 - 254 146337294 - BRADO0121 - hypothetical protein 120 61.81 -1 136941..137084 - 47 146337295 - BRADO0122 - putative cytochrome c precursor 121 65.45 0 137689..139410 - 573 146337296 - BRADO0123 - putative quinoprotein ethanol dehydrogenase family protein 122 67.80 0 140245..141123 + 292 146337297 - BRADO0124 - putative oxidoreductase; putative 3-hydroxyisobutyrate dehydrogenase 123 57.64 -2 141449..141880 - 143 146337298 - BRADO0125 - hypothetical protein 124 71.52 +1 143495..144463 + 322 146337299 - BRADO0128 - putative NAD dependent epimerase/dehydratase family protein 125 64.06 0 144576..145382 - 268 146337300 uppP BRADO0129 - undecaprenyl pyrophosphate phosphatase 126 67.39 0 145741..146433 + 230 146337301 - BRADO0130 - putative glutathione S-transferase family protein 127 67.79 0 146583..147560 + 325 146337302 - BRADO0131 - putative iron-sulfur cluster binding protein 128 69.59 +1 147572..148357 - 261 146337303 - BRADO0132 - hypothetical protein 129 60.20 -1 148620..149222 + 200 146337304 infC BRADO0134 - translation initiation factor IF-3 130 72.95 +2 149315..149680 - 121 146337305 - BRADO0135 - putative signal peptide 131 60.70 -1 149944..150144 + 66 146337306 rpmI BRADO0137 - 50S ribosomal protein L35 132 65.56 0 150217..150576 + 119 146337307 rplT BRADO0138 - 50S ribosomal protein L20 133 64.91 0 150720..151802 + 360 146337308 pheS BRADO0139 - phenylalanyl-tRNA synthetase subunit alpha 134 61.39 -1 151799..152215 + 138 146337309 - BRADO0140 - hypothetical protein 135 67.16 0 152212..154620 + 802 146337310 pheT BRADO0141 - phenylalanyl-tRNA synthetase subunit beta 136 67.80 0 154617..155408 + 263 146337311 - BRADO0142 - hypothetical protein 137 61.69 -1 155442..156386 + 314 146337312 - BRADO0143 - beta-lactamase family hydrolase 138 70.21 +1 156542..157951 - 469 146337313 - BRADO0144 - putative flavin containing amine oxidoreductase 139 63.70 0 158146..159123 + 325 146337314 - BRADO0145 - hypothetical protein 140 61.96 -1 159126..159401 - 91 146337315 - BRADO0146 - hypothetical protein 141 68.57 0 159669..162137 + 822 146337316 actP BRADO0147 - copper-transporting P-type ATPase 142 66.27 0 162348..163100 + 250 146337317 - BRADO0148 - CysZ-like protein 143 68.02 0 163038..164657 - 539 146337318 - BRADO0149 - multidrug ABC transporter membrane protein 144 67.91 0 164654..165136 - 160 146337319 - BRADO0150 - hypothetical protein 145 68.38 0 165169..166221 - 350 146337320 - BRADO0151 - putative Type III polyketide synthase; putative chalcone synthase 146 66.91 0 166604..167437 - 277 146337321 nth BRADO0152 - endonuclease III DNA-(apurinic or apyrimidinic site) lyase 147 67.04 0 167460..167993 + 177 146337322 - BRADO0153 - hypothetical protein 148 70.33 +1 168384..169283 + 299 146337323 - BRADO0154 - putative methylated-DNA--protein-cysteine methyltransferase (O-6-methylguanine-DNA alkyltransferase); putative ADA regulatory protein 149 56.73 -2 169380..169721 - 113 146337324 - BRADO0155 - hypothetical protein 150 64.91 0 170071..170355 - 94 146337325 - BRADO0156 - hypothetical protein 151 66.35 0 170819..171442 - 207 146337326 gpmA BRADO0157 - phosphoglyceromutase 152 68.86 0 171467..172285 - 272 146337327 dapB BRADO0158 - dihydrodipicolinate reductase 153 63.70 0 172367..172669 - 100 146337328 - BRADO0159 - hypothetical protein 154 70.08 +1 172703..173434 - 243 146337329 pyrF BRADO0160 - orotidine 5'-phosphate decarboxylase (OMP decarboxylase) (OMPDCase) (OMPdecase) 155 68.79 0 173441..174052 - 203 146337330 - BRADO0161 - putative NADPH-dependent FMN reductase 156 66.33 0 174065..174667 - 200 146337331 pmtA BRADO0162 - phospholipid N-methyltransferase 157 68.26 0 174885..176015 - 376 146337332 dnaJ BRADO0163 - chaperone protein dnaJ, heat shock protein (Hsp40), co-chaperone with dnaK 158 64.35 0 176158..178053 - 631 146337333 dnaK BRADO0164 - molecular chaperone DnaK 159 68.80 0 178591..179526 + 311 146337334 - BRADO0165 - putative signal peptide 160 65.66 0 179537..180232 - 231 146337335 - BRADO0166 - putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase 161 66.76 0 180504..181550 + 348 146337336 - BRADO0168 - glycosyl transferase family protein 162 64.67 0 181547..182146 + 199 146337337 - BRADO0169 - methyl transferase 163 67.13 0 182147..183664 - 505 146337338 - BRADO0170 - hypothetical protein 164 66.99 0 183959..184579 - 206 146337339 grpE BRADO0171 - protein grpE (HSP-70 cofactor) 165 68.69 0 184710..185798 - 362 146337340 hrcA BRADO0172 - heat-inducible transcription repressor 166 69.33 +1 185987..186700 + 237 146337341 rph BRADO0173 - ribonuclease PH 167 72.09 +1 186733..187341 + 202 146337342 - BRADO0174 - putative deoxyribonucleotide triphosphate pyrophosphatase 168 67.62 0 187328..188485 + 385 146337343 - BRADO0175 - coproporphyrinogen III oxidase 169 70.32 +1 188799..190058 - 419 146337344 - BRADO0177 - hypothetical protein 170 71.17 +1 190381..191268 + 295 146337345 - BRADO0178 - putative methyltransferase 171 69.95 +1 191255..191680 + 141 146337346 - BRADO0179 - hypothetical protein 172 66.35 0 191714..192655 + 313 146337347 gshB BRADO0180 - glutathione synthetase 173 63.11 0 193090..193905 + 271 146337348 - BRADO0181 - putative exodeoxyribonuclease III (xthA) 174 66.91 0 194022..194438 - 138 146337349 - BRADO0182 - putative cyclic nucleotide binding protein 175 64.19 0 194532..195218 - 228 146337350 - BRADO0183 - putative two-component transcriptional regulator. 176 70.31 +1 195469..196017 + 182 146337351 - BRADO0184 - putative signal peptide 177 68.19 0 196040..196825 + 261 146337352 - BRADO0185 - putative hydratase/decarboxylase 178 68.13 0 196868..197551 - 227 146337353 - BRADO0186 - putative signal peptide 179 66.20 0 197664..199361 + 565 146337354 - BRADO0187 - hypothetical protein 180 64.13 0 199382..200368 - 328 146337355 - BRADO0188 - GGDEF domain-containing protein 65.78 MEAN 3.31 STD DEV
Last Updated: Dec 04, 2008
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.