IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
742	 58.07	0	750586..751062	+	158	161618733	-	BCAN_A0779	-	transcriptional regulator NrdR
743	 61.76	+1	751064..752185	+	373	161618734	ribD	BCAN_A0780	-	riboflavin biosynthesis protein RibD
744	 57.31	0	752185..752793	+	202	161618735	ribE	BCAN_A0781	-	riboflavin synthase subunit alpha
745	 58.44	0	752888..753349	+	153	161618736	ribH	BCAN_A0782	-	riboflavin synthase subunit beta
746	 59.11	0	753355..753870	+	171	161618737	nusB	BCAN_A0783	-	transcription antitermination protein NusB
747	 59.62	0	754321..756477	+	718	161618738	-	BCAN_A0784	-	membrane-bound proton-translocating pyrophosphatase
748	 58.38	0	756549..757055	-	168	161618739	-	BCAN_A0785	-	SmpA/OmlA domain-containing protein
749	 53.33	0	757157..757711	+	184	161618740	-	BCAN_A0786	-	ubiquinol-cytochrome C chaperone
750	 55.38	0	757831..758388	+	185	161618741	-	BCAN_A0787	-	hypothetical protein
751	 58.12	0	758506..759546	+	346	161618742	plsX	BCAN_A0788	-	putative glycerol-3-phosphate acyltransferase PlsX
752	 59.57	0	759794..760765	+	323	161618743	fabH	BCAN_A0789	-	3-oxoacyl-(acyl carrier protein) synthase III
753	 52.78	-1	760884..761207	+	107	161618744	ihfA	BCAN_A0790	-	integration host factor subunit alpha
754	 58.01	0	761741..762283	+	180	161618745	-	BCAN_A0791	-	HTH-type transcriptional regulator in himA 3'region
755	 52.52	-1	762333..762650	-	105	161618746	sugE	BCAN_A0792	-	quaternary ammonium compound-resistance protein sugE
756	 56.48	0	764665..764880	-	71	161618747	-	BCAN_A0796	-	glycosyl transferase group 1
757	 53.57	0	764889..765476	-	195	161618748	-	BCAN_A0797	-	polysaccharide export protein
758	 54.60	0	765600..766262	+	220	161618749	-	BCAN_A0798	-	exopolysaccharide transport protein family
759	 54.34	0	766330..766548	-	72	161618750	-	BCAN_A0799	-	hypothetical protein
760	 58.50	0	766900..767976	+	358	161618751	-	BCAN_A0800	-	cytochrome oxidase assembly
761	 59.27	0	768129..769061	-	310	161618752	argC	BCAN_A0801	-	N-acetyl-gamma-glutamyl-phosphate reductase
762	 59.31	0	769151..770101	-	316	161618753	speB	BCAN_A0802	-	agmatinase
763	 61.22	0	770192..770668	-	158	161618754	rpsI	BCAN_A0803	-	30S ribosomal protein S9
764	 57.20	0	770671..771135	-	154	161618755	rplM	BCAN_A0804	-	50S ribosomal protein L13
765	 58.61	0	771371..771817	-	148	161618756	-	BCAN_A0805	-	hypothetical protein
766	 57.17	0	772051..773334	+	427	161618757	-	BCAN_A0806	-	O-acetylhomoserine aminocarboxypropyltransferase
767	 60.04	0	773406..773858	-	150	161618758	-	BCAN_A0807	-	hypothetical protein
768	 49.71	-1	773908..774078	-	56	161618759	-	BCAN_A0808	-	hypothetical protein
769	 46.08	-2	774422..774931	+	169	161618760	-	BCAN_A0809	-	hypothetical protein
770	 47.98	-2	774928..775323	+	131	161618761	-	BCAN_A0810	-	hypothetical protein
771	 51.19	-1	775377..775712	+	111	161618762	-	BCAN_A0811	-	hypothetical protein
772	 48.51	-2	775769..776170	-	133	161618763	-	BCAN_A0812	-	hypothetical protein
773	 43.72	-2	776467..776649	+	60	161618764	-	BCAN_A0814	-	hypothetical protein
774	 53.92	0	777033..777236	-	67	161618765	-	BCAN_A0816	-	hypothetical protein
775	 51.91	-1	777744..778109	+	121	161618766	nuoA	BCAN_A0817	-	NADH dehydrogenase subunit A
776	 60.14	0	778100..778681	+	193	161618767	-	BCAN_A0818	-	NADH dehydrogenase subunit B
777	 56.98	0	778794..779402	+	202	161618768	nuoC	BCAN_A0819	-	NADH dehydrogenase subunit C
778	 58.02	0	779420..780610	+	396	161618769	nuoD	BCAN_A0820	-	NADH dehydrogenase subunit D
779	 58.68	0	780610..781323	+	237	161618770	nuoE	BCAN_A0821	-	NADH dehydrogenase subunit E
780	 59.40	0	781327..782634	+	435	161618771	nuoF	BCAN_A0822	-	NADH dehydrogenase I subunit F
781	 61.06	0	782769..784853	+	694	161618772	-	BCAN_A0823	-	NADH dehydrogenase subunit G
782	 55.27	0	784873..785916	+	347	161618773	nuoH	BCAN_A0824	-	NADH dehydrogenase subunit H
783	 58.74	0	785929..786420	+	163	161618774	-	BCAN_A0825	-	NADH dehydrogenase subunit I
784	 57.77	0	786594..787211	+	205	161618775	nuoJ	BCAN_A0826	-	NADH dehydrogenase subunit J
785	 51.78	-1	787222..787530	+	102	161618776	nuoK	BCAN_A0827	-	NADH dehydrogenase subunit K
786	 57.05	0	787538..789523	+	661	161618777	-	BCAN_A0828	-	NADH dehydrogenase subunit L
787	 57.39	0	789523..791031	+	502	161618778	-	BCAN_A0829	-	NADH dehydrogenase subunit M
788	 57.06	0	791053..792489	+	478	161618779	-	BCAN_A0830	-	NADH dehydrogenase subunit N
789	 58.27	0	792515..793312	+	265	161618780	-	BCAN_A0831	-	biotin--acetyl-CoA-carboxylase ligase
790	 59.81	0	793506..795182	+	558	161618781	-	BCAN_A0832	-	hypothetical protein
791	 57.28	0	795222..795626	+	134	161618782	-	BCAN_A0833	-	methylmalonyl-CoA epimerase
792	 53.70	0	795629..795898	+	89	161618783	-	BCAN_A0834	-	hypothetical protein
793	 53.90	0	796256..796396	+	46	161618784	-	BCAN_A0835	-	hypothetical protein
794	 38.71	-2	796427..796519	+	30	161618785	-	BCAN_A0836	-	hypothetical protein
795	 57.11	0	796746..798074	+	442	161618786	proS	BCAN_A0837	-	prolyl-tRNA synthetase
796	 57.29	0	798116..799384	+	422	161618787	-	BCAN_A0838	-	LolC/E family lipoprotein releasing system, transmembrane protein
797	 61.40	+1	799384..800067	+	227	161618788	lolD	BCAN_A0839	-	lipoprotein-releasing system ATP-binding protein lolD
798	 57.96	0	800726..804217	+	1163	161618789	dnaE	BCAN_A0840	-	DNA polymerase III subunit alpha
799	 55.56	0	804258..804455	+	65	161618790	-	BCAN_A0841	-	hypothetical protein
800	 51.45	-1	804500..804913	-	137	161618791	-	BCAN_A0842	-	hypothetical protein
801	 53.08	0	805185..806207	-	340	161618792	-	BCAN_A0843	-	extensin family protein
802	 50.30	-1	806155..806319	+	54	161618793	-	BCAN_A0844	-	hypothetical protein
803	 57.44	0	806491..807108	+	205	161618794	rpsD	BCAN_A0845	-	30S ribosomal protein S4
804	 55.33	0	807617..808498	+	293	161618795	-	BCAN_A0846	-	PP-loop domain-containing protein
805	 57.97	0	808485..809312	+	275	161618796	-	BCAN_A0847	-	hypothetical protein
806	 58.14	0	809527..810792	-	421	161618797	-	BCAN_A0848	-	Bcr/CflA subfamily drug resistance transporter
807	 55.91	0	810791..810976	+	61	161618798	-	BCAN_A0849	-	hypothetical protein
808	 50.45	-1	811063..811395	-	110	161618799	-	BCAN_A0850	-	glutaredoxin-like protein
809	 58.55	0	811580..811813	-	77	161618800	-	BCAN_A0851	-	hypothetical protein
810	 59.11	0	812083..814305	-	740	161618801	purL	BCAN_A0852	-	phosphoribosylformylglycinamidine synthase II
811	 62.44	+1	814492..814893	-	133	161618802	-	BCAN_A0853	-	hypothetical protein
812	 57.10	0	814953..815600	-	215	161618803	-	BCAN_A0854	-	glutathione S-transferase domain-containing protein
813	 60.71	0	815852..816523	-	223	161618804	purQ	BCAN_A0855	-	phosphoribosylformylglycinamidine synthase subunit I
814	 58.85	0	816546..816788	-	80	161618805	purS	BCAN_A0856	-	phosphoribosylformylglycinamidine synthase subunit PurS
815	 56.21	0	816904..817668	-	254	161618806	purC	BCAN_A0857	-	phosphoribosylaminoimidazole-succinocarboxamide synthase
816	 56.17	0	817924..818247	+	107	161618807	-	BCAN_A0858	-	hypothetical protein
817	 57.81	0	818312..819079	+	255	161618808	hpaI	BCAN_A0859	-	2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase
818	 58.73	0	819128..819694	-	188	161618809	-	BCAN_A0860	-	hypothetical protein
819	 61.53	+1	819963..820838	+	291	161618810	-	BCAN_A0861	-	biphenyl-2,3-diol 1,2-dioxygenase 3
820	 59.52	0	821064..822365	-	433	161618811	purB	BCAN_A0862	-	adenylosuccinate lyase
821	 60.32	0	822392..823069	-	225	161618812	rpe	BCAN_A0863	-	ribulose-phosphate 3-epimerase
822	 57.50	0	823227..824153	-	308	161618813	-	BCAN_A0864	-	lipid A biosynthesis lauroyl acyltransferase
823	 61.32	+1	824167..825195	-	342	161618814	-	BCAN_A0865	-	hypothetical protein
824	 60.64	0	825277..826554	-	425	161618815	tcmK	BCAN_A0866	-	3-oxoacyl-(acyl carrier protein) synthase II
825	 60.74	0	826556..827737	-	393	161618816	-	BCAN_A0867	-	3-oxoacyl-(acyl carrier protein) synthase II
826	 51.42	-1	827885..828166	-	93	161618817	acpXL	BCAN_A0868	-	acyl carrier protein
827	 59.84	0	828367..829128	-	253	161618818	-	BCAN_A0869	-	hypothetical protein
828	 56.99	0	829344..830366	+	340	161618819	-	BCAN_A0870	-	aldose 1-epimerase
829	 60.02	0	830363..831280	-	305	161618820	kdgK	BCAN_A0871	-	2-dehydro-3-deoxygluconokinase
830	 58.20	0	831481..832212	+	243	161618821	-	BCAN_A0872	-	hypothetical protein
831	 59.12	0	832216..833355	+	379	161618822	phnM	BCAN_A0873	-	phosphonate metabolism protein PhnM
832	 58.48	0	833352..834035	-	227	161618823	-	BCAN_A0874	-	HAD family hydrolase
833	 59.43	0	835272..836294	+	340	161618824	-	BCAN_A0876	-	tRNA-dihydrouridine synthase A
834	 54.67	0	836995..837144	-	49	161618825	-	BCAN_A0879	-	hypothetical protein
835	 62.32	+1	837209..837991	-	260	161618826	cobS	BCAN_A0880	-	cobalamin synthase
836	 62.25	+1	838145..839164	+	339	161618827	cobU	BCAN_A0881	-	nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
837	 54.58	0	839272..839751	-	159	161618828	-	BCAN_A0882	-	hypothetical protein
838	 59.97	0	839880..840521	-	213	161618829	-	BCAN_A0883	-	hypothetical protein
839	 57.72	0	840618..841187	-	189	161618830	-	BCAN_A0884	-	nuclease
840	 47.31	-2	841158..841436	+	92	161618831	-	BCAN_A0885	-	hypothetical protein
841	 56.97	0	841808..842611	+	267	161618832	exoR	BCAN_A0886	-	exopolysaccharide production negative regulator precursor
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.