IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
699	 58.42	0	701797..703470	-	557	161618690	-	BCAN_A0733	-	L-lactate transport
700	 53.27	0	704004..704309	+	101	161618691	-	BCAN_A0735	-	NADH-ubiquinone oxidoreductase
701	 56.01	0	704875..705465	+	196	161618692	-	BCAN_A0737	-	hypothetical protein
702	 52.61	-1	705686..706297	-	203	161618693	-	BCAN_A0738	-	hypothetical protein
703	 53.48	0	706622..707167	-	181	161618694	-	BCAN_A0739	-	adenylate kinase
704	 52.12	-1	707164..708435	-	423	161618695	-	BCAN_A0740	-	GCN5-related N-acetyltransferase
705	 51.45	-1	708377..709171	-	264	161618696	-	BCAN_A0741	-	helix-turn-helix domain-containing protein
706	 43.33	-2	709196..709615	-	139	161618697	-	BCAN_A0742	-	hypothetical protein
707	 53.29	0	709995..710891	+	298	161618698	-	BCAN_A0743	-	hypothetical protein
708	 52.56	-1	711270..713006	+	578	161618699	-	BCAN_A0744	-	integrase catalytic subunit
709	 52.05	-1	712999..713949	+	316	161618700	-	BCAN_A0745	-	transposition protein
710	 48.10	-2	713946..715523	+	525	161618701	-	BCAN_A0746	-	hypothetical protein
711	 47.98	-2	715822..716019	-	65	161618702	-	BCAN_A0747	-	hypothetical protein
712	 46.56	-2	716260..717567	+	435	161618703	-	BCAN_A0748	-	hypothetical protein
713	 60.04	0	718021..719394	+	457	161618704	-	BCAN_A0749	-	hypothetical protein
714	 57.00	0	719483..720361	+	292	161618705	-	BCAN_A0750	-	hypothetical protein
715	 62.38	+1	720745..721257	-	170	161618706	-	BCAN_A0751	-	SH3 type 3 domain-containing protein
716	 59.84	0	721417..721665	-	82	161618707	-	BCAN_A0752	-	lipoprotein
717	 48.72	-2	721768..721923	-	51	161618708	-	BCAN_A0753	-	hypothetical protein
718	 56.15	0	721910..723079	-	389	161618709	metC	BCAN_A0754	-	cystathionine beta-lyase
719	 56.77	0	723290..724057	+	255	161618710	bcrC	BCAN_A0755	-	bacitracin transport permease protein BCRC
720	 55.33	0	724513..725544	+	343	161618711	-	BCAN_A0756	-	lysine-arginine-ornithine-binding periplasmic protein
721	 54.82	0	725578..725805	+	75	161618712	-	BCAN_A0757	-	hypothetical protein
722	 56.70	0	725841..727034	+	397	161618713	-	BCAN_A0758	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
723	 58.38	0	727037..728194	+	385	161618714	-	BCAN_A0759	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
724	 54.90	0	728209..729024	+	271	161618715	bztD	BCAN_A0760	-	glutamate/glutamine/aspartate/asparagine transport ATP-binding protein bztD
725	 59.12	0	729072..730277	-	401	161618716	-	BCAN_A0761	-	salicylate hydroxylase
726	 54.51	0	730307..730561	-	84	161618717	-	BCAN_A0762	-	hypothetical protein
727	 59.19	0	733082..734620	+	512	161618718	-	BCAN_A0764	-	Ppx/GppA phosphatase
728	 60.49	0	734782..735930	-	382	161618719	rnd	BCAN_A0765	-	ribonuclease D
729	 58.45	0	736157..737944	+	595	161618720	aspS	BCAN_A0766	-	aspartyl-tRNA synthetase
730	 55.64	0	738028..739224	-	398	161618721	-	BCAN_A0767	-	hypothetical protein
731	 46.67	-2	739279..739518	+	79	161618722	-	BCAN_A0768	-	hypothetical protein
732	 58.11	0	739624..741936	+	770	161618723	parC	BCAN_A0769	-	DNA topoisomerase IV subunit A
733	 58.53	0	742115..742864	-	249	161618724	ate	BCAN_A0770	-	arginyl-tRNA-protein transferase
734	 54.14	0	742985..743455	-	156	161618725	-	BCAN_A0771	-	RDD domain-containing protein
735	 59.34	0	743602..744639	-	345	161618726	hemB	BCAN_A0772	-	delta-aminolevulinic acid dehydratase
736	 58.38	0	744807..745856	+	349	161618727	-	BCAN_A0773	-	enoyl-CoA hydratase
737	 58.39	0	745870..746304	+	144	161618728	-	BCAN_A0774	-	hypothetical protein
738	 55.00	0	746535..747134	+	199	161618729	-	BCAN_A0775	-	MarR family transcriptional regulator
739	 52.48	-1	747221..747361	-	46	161618730	-	BCAN_A0776	-	hypothetical protein
740	 58.22	0	747496..748797	+	433	161618731	-	BCAN_A0777	-	peptidoglycan binding domain-containing protein
741	 58.24	0	749028..750344	+	438	161618732	glyA	BCAN_A0778	-	serine hydroxymethyltransferase
742	 58.07	0	750586..751062	+	158	161618733	-	BCAN_A0779	-	transcriptional regulator NrdR
743	 61.76	+1	751064..752185	+	373	161618734	ribD	BCAN_A0780	-	riboflavin biosynthesis protein RibD
744	 57.31	0	752185..752793	+	202	161618735	ribE	BCAN_A0781	-	riboflavin synthase subunit alpha
745	 58.44	0	752888..753349	+	153	161618736	ribH	BCAN_A0782	-	riboflavin synthase subunit beta
746	 59.11	0	753355..753870	+	171	161618737	nusB	BCAN_A0783	-	transcription antitermination protein NusB
747	 59.62	0	754321..756477	+	718	161618738	-	BCAN_A0784	-	membrane-bound proton-translocating pyrophosphatase
748	 58.38	0	756549..757055	-	168	161618739	-	BCAN_A0785	-	SmpA/OmlA domain-containing protein
749	 53.33	0	757157..757711	+	184	161618740	-	BCAN_A0786	-	ubiquinol-cytochrome C chaperone
750	 55.38	0	757831..758388	+	185	161618741	-	BCAN_A0787	-	hypothetical protein
751	 58.12	0	758506..759546	+	346	161618742	plsX	BCAN_A0788	-	putative glycerol-3-phosphate acyltransferase PlsX
752	 59.57	0	759794..760765	+	323	161618743	fabH	BCAN_A0789	-	3-oxoacyl-(acyl carrier protein) synthase III
753	 52.78	-1	760884..761207	+	107	161618744	ihfA	BCAN_A0790	-	integration host factor subunit alpha
754	 58.01	0	761741..762283	+	180	161618745	-	BCAN_A0791	-	HTH-type transcriptional regulator in himA 3'region
755	 52.52	-1	762333..762650	-	105	161618746	sugE	BCAN_A0792	-	quaternary ammonium compound-resistance protein sugE
756	 56.48	0	764665..764880	-	71	161618747	-	BCAN_A0796	-	glycosyl transferase group 1
757	 53.57	0	764889..765476	-	195	161618748	-	BCAN_A0797	-	polysaccharide export protein
758	 54.60	0	765600..766262	+	220	161618749	-	BCAN_A0798	-	exopolysaccharide transport protein family
759	 54.34	0	766330..766548	-	72	161618750	-	BCAN_A0799	-	hypothetical protein
760	 58.50	0	766900..767976	+	358	161618751	-	BCAN_A0800	-	cytochrome oxidase assembly
761	 59.27	0	768129..769061	-	310	161618752	argC	BCAN_A0801	-	N-acetyl-gamma-glutamyl-phosphate reductase
762	 59.31	0	769151..770101	-	316	161618753	speB	BCAN_A0802	-	agmatinase
763	 61.22	0	770192..770668	-	158	161618754	rpsI	BCAN_A0803	-	30S ribosomal protein S9
764	 57.20	0	770671..771135	-	154	161618755	rplM	BCAN_A0804	-	50S ribosomal protein L13
765	 58.61	0	771371..771817	-	148	161618756	-	BCAN_A0805	-	hypothetical protein
766	 57.17	0	772051..773334	+	427	161618757	-	BCAN_A0806	-	O-acetylhomoserine aminocarboxypropyltransferase
767	 60.04	0	773406..773858	-	150	161618758	-	BCAN_A0807	-	hypothetical protein
768	 49.71	-1	773908..774078	-	56	161618759	-	BCAN_A0808	-	hypothetical protein
769	 46.08	-2	774422..774931	+	169	161618760	-	BCAN_A0809	-	hypothetical protein
770	 47.98	-2	774928..775323	+	131	161618761	-	BCAN_A0810	-	hypothetical protein
771	 51.19	-1	775377..775712	+	111	161618762	-	BCAN_A0811	-	hypothetical protein
772	 48.51	-2	775769..776170	-	133	161618763	-	BCAN_A0812	-	hypothetical protein
773	 43.72	-2	776467..776649	+	60	161618764	-	BCAN_A0814	-	hypothetical protein
774	 53.92	0	777033..777236	-	67	161618765	-	BCAN_A0816	-	hypothetical protein
775	 51.91	-1	777744..778109	+	121	161618766	nuoA	BCAN_A0817	-	NADH dehydrogenase subunit A
776	 60.14	0	778100..778681	+	193	161618767	-	BCAN_A0818	-	NADH dehydrogenase subunit B
777	 56.98	0	778794..779402	+	202	161618768	nuoC	BCAN_A0819	-	NADH dehydrogenase subunit C
778	 58.02	0	779420..780610	+	396	161618769	nuoD	BCAN_A0820	-	NADH dehydrogenase subunit D
779	 58.68	0	780610..781323	+	237	161618770	nuoE	BCAN_A0821	-	NADH dehydrogenase subunit E
780	 59.40	0	781327..782634	+	435	161618771	nuoF	BCAN_A0822	-	NADH dehydrogenase I subunit F
781	 61.06	0	782769..784853	+	694	161618772	-	BCAN_A0823	-	NADH dehydrogenase subunit G
782	 55.27	0	784873..785916	+	347	161618773	nuoH	BCAN_A0824	-	NADH dehydrogenase subunit H
783	 58.74	0	785929..786420	+	163	161618774	-	BCAN_A0825	-	NADH dehydrogenase subunit I
784	 57.77	0	786594..787211	+	205	161618775	nuoJ	BCAN_A0826	-	NADH dehydrogenase subunit J
785	 51.78	-1	787222..787530	+	102	161618776	nuoK	BCAN_A0827	-	NADH dehydrogenase subunit K
786	 57.05	0	787538..789523	+	661	161618777	-	BCAN_A0828	-	NADH dehydrogenase subunit L
787	 57.39	0	789523..791031	+	502	161618778	-	BCAN_A0829	-	NADH dehydrogenase subunit M
788	 57.06	0	791053..792489	+	478	161618779	-	BCAN_A0830	-	NADH dehydrogenase subunit N
789	 58.27	0	792515..793312	+	265	161618780	-	BCAN_A0831	-	biotin--acetyl-CoA-carboxylase ligase
790	 59.81	0	793506..795182	+	558	161618781	-	BCAN_A0832	-	hypothetical protein
791	 57.28	0	795222..795626	+	134	161618782	-	BCAN_A0833	-	methylmalonyl-CoA epimerase
792	 53.70	0	795629..795898	+	89	161618783	-	BCAN_A0834	-	hypothetical protein
793	 53.90	0	796256..796396	+	46	161618784	-	BCAN_A0835	-	hypothetical protein
794	 38.71	-2	796427..796519	+	30	161618785	-	BCAN_A0836	-	hypothetical protein
795	 57.11	0	796746..798074	+	442	161618786	proS	BCAN_A0837	-	prolyl-tRNA synthetase
796	 57.29	0	798116..799384	+	422	161618787	-	BCAN_A0838	-	LolC/E family lipoprotein releasing system, transmembrane protein
797	 61.40	+1	799384..800067	+	227	161618788	lolD	BCAN_A0839	-	lipoprotein-releasing system ATP-binding protein lolD
798	 57.96	0	800726..804217	+	1163	161618789	dnaE	BCAN_A0840	-	DNA polymerase III subunit alpha
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.