IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome.
Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below
--(default is +/- 3.48 of the mean %G+C).
Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff.
Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).




A yellow circle indicates its %G+C value is bigger than the high value.
A green circle indicates its %G+C value is bigger than the low value and smaller than the high value.
A pink circle indicates its %G+C value is smaller than the low value.

A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV.
A black verticle bar indicates a transfer RNA gene lies between the two ORFs.
A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs.
A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs.
A black square indicates the dot is annotated as a transposase.
A black triangle indicates the dot is annotated as an integrase.


Low:  High:    Mean: 57.15   STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
22	 54.90	0	26973..28094	-	373	161618013	mdmB	BCAN_A0023	-	acyltransferase mdmB
23	 55.99	0	28617..29000	-	127	161618014	-	BCAN_A0025	-	hypothetical protein
24	 61.27	0	29385..30737	+	450	161618015	aroA	BCAN_A0026	-	3-phosphoshikimate 1-carboxyvinyltransferase
25	 62.42	+1	30734..31393	+	219	161618016	cmk	BCAN_A0027	-	cytidylate kinase
26	 58.02	0	31609..33309	+	566	161618017	rpsA	BCAN_A0028	-	30S ribosomal protein S1
27	 59.84	0	33727..34737	-	336	161618018	-	BCAN_A0029	-	hypothetical protein
28	 57.33	0	34853..35752	+	299	161618019	-	BCAN_A0030	-	LysR family transcriptional regulator
29	 28.99	-2	35746..36321	-	191	161618020	-	BCAN_A0031	-	hypothetical protein
30	 55.22	0	36357..37640	-	427	161618021	-	BCAN_A0032	-	lytic murein transglycosylase
31	 60.73	0	37656..38261	-	201	161618022	recR	BCAN_A0033	-	recombination protein RecR
32	 59.57	0	38392..38715	-	107	161618023	-	BCAN_A0034	-	hypothetical protein
33	 61.91	+1	38740..40548	-	602	161618024	dnaX	BCAN_A0035	-	DNA polymerase III subunits gamma and tau
34	 61.73	+1	40830..41234	+	134	161618025	-	BCAN_A0037	-	histidine triad (HIT) protein
35	 60.13	0	41263..42210	+	315	161618026	-	BCAN_A0038	-	peroxisomal NADH pyrophosphatase NUDT12
36	 58.68	0	42211..43074	-	287	161618027	pheA	BCAN_A0039	-	prephenate dehydratase
37	 60.45	0	43163..43918	-	251	161618028	kdsB	BCAN_A0040	-	3-deoxy-manno-octulosonate cytidylyltransferase
38	 56.98	0	44296..44904	+	202	161618029	-	BCAN_A0041	-	cytochrome c
39	 61.59	+1	44949..45914	-	321	161618030	-	BCAN_A0042	-	hypothetical protein
40	 51.13	-1	45970..46278	+	102	161618031	-	BCAN_A0043	-	hypothetical protein
41	 56.02	0	46453..47466	+	337	161618032	cyoA	BCAN_A0044	-	ubiquinol oxidase, subunit II
42	 58.03	0	47546..49525	+	659	161618033	cyoB	BCAN_A0045	-	cytochrome o ubiquinol oxidase, subunit I
43	 57.94	0	49529..50158	+	209	161618034	cyoC	BCAN_A0046	-	cytochrome o ubiquinol oxidase, subunit III
44	 55.46	0	50158..50523	+	121	161618035	cyoD	BCAN_A0047	-	cytochrome o ubiquinol oxidase subunit IV
45	 66.87	+2	50993..51478	+	161	161618036	-	BCAN_A0048	-	SH3 type 3 domain-containing protein
46	 59.22	0	52074..53993	+	639	161618037	-	BCAN_A0049	-	surface antigen (D15)
47	 59.81	0	53990..58729	+	1579	161618038	-	BCAN_A0050	-	hypothetical protein
48	 57.44	0	58874..59599	+	241	161618039	-	BCAN_A0051	-	ErfK/YbiS/YcfS/YnhG family protein
49	 55.09	0	59650..59865	-	71	161618040	-	BCAN_A0052	-	hypothetical protein
50	 59.02	0	59935..60444	-	169	161618041	-	BCAN_A0053	-	hypothetical protein
51	 61.35	+1	60775..60981	-	68	161618042	-	BCAN_A0054	-	hypothetical protein
52	 58.61	0	60992..61996	-	334	161618043	-	BCAN_A0055	-	hypothetical protein
53	 59.65	0	62131..62529	-	132	161618044	-	BCAN_A0056	-	hypothetical protein
54	 58.59	0	62838..63233	-	131	161618045	-	BCAN_A0057	-	glyoxalase/bleomycin resistance protein/dioxygenase
55	 62.20	+1	63430..64593	+	387	161618046	-	BCAN_A0058	-	nucleotide-binding protein-like protein
56	 57.84	0	64790..66421	-	543	161618047	pgm	BCAN_A0059	-	phosphoglucomutase
57	 44.62	-2	66477..66662	-	61	161618048	-	BCAN_A0060	-	hypothetical protein
58	 59.84	0	66637..67530	-	297	161618049	-	BCAN_A0061	-	transcriptional regulatory protein
59	 54.65	0	67655..68578	+	307	161618050	-	BCAN_A0062	-	hypothetical protein
60	 58.94	0	68651..69349	+	232	161618051	-	BCAN_A0063	-	putative fructose transport system kinase
61	 58.99	0	69449..70138	+	229	161618052	-	BCAN_A0064	-	fumarylacetoacetate hydrolase domain-containing protein
62	 52.60	-1	70158..70349	+	63	161618053	-	BCAN_A0065	-	hypothetical protein
63	 46.30	-2	70411..70626	+	71	161618054	-	BCAN_A0066	-	hypothetical protein
64	 51.85	-1	70792..70980	+	62	161618055	-	BCAN_A0067	-	hypothetical protein
65	 62.15	+1	70995..71858	+	287	161618056	-	BCAN_A0068	-	lytic transglycosylase catalytic
66	 57.84	0	72044..72700	+	218	161618057	-	BCAN_A0069	-	hemolysin-3
67	 64.78	+1	76075..77661	-	528	161618058	-	BCAN_A0071	-	hypothetical protein
68	 63.89	+1	77552..78415	-	287	161618059	-	BCAN_A0072	-	hypothetical protein
69	 52.90	-1	78934..81156	+	740	161618060	-	BCAN_A0073	-	hypothetical protein
70	 53.52	0	81176..81913	+	245	161618061	-	BCAN_A0074	-	invasion associated locus B family protein
71	 58.23	0	81992..83212	-	406	161618062	argG	BCAN_A0075	-	argininosuccinate synthase
72	 57.74	0	84062..84565	-	167	161618063	-	BCAN_A0077	-	hypothetical protein
73	 59.22	0	84599..85834	-	411	161618064	-	BCAN_A0078	-	radical SAM protein
74	 51.04	-1	85778..85969	+	63	161618065	-	BCAN_A0079	-	hypothetical protein
75	 55.38	0	85954..86148	+	64	161618066	-	BCAN_A0080	-	hypothetical protein
76	 57.54	0	86094..86597	-	167	161618067	-	BCAN_A0081	-	hypothetical protein
77	 63.28	+1	87053..87436	-	127	161618068	-	BCAN_A0082	-	hypothetical protein
78	 54.76	0	87524..87817	-	97	161618069	-	BCAN_A0083	-	pterin-4-alpha-carbinolamine dehydratase
79	 55.61	0	88044..88649	+	201	161618070	-	BCAN_A0084	-	protein tyrosine phosphatase
80	 61.25	0	88559..89149	-	196	161618071	-	BCAN_A0085	-	2'-5' RNA ligase
81	 55.92	0	89330..90055	-	241	161618072	-	BCAN_A0086	-	arylesterase precursor
82	 61.73	+1	90202..90930	+	242	161618073	-	BCAN_A0087	-	ABC transporter related
83	 61.69	+1	90927..93476	+	849	161618074	-	BCAN_A0088	-	hypothetical protein
84	 57.99	0	93711..94448	+	245	161618075	-	BCAN_A0090	-	hypothetical protein
85	 59.44	0	94563..95102	+	179	161618076	pat	BCAN_A0091	-	phosphinothricin N-acetyltransferase
86	 54.73	0	95122..95523	-	133	161618077	-	BCAN_A0092	-	hypothetical protein
87	 56.87	0	96073..96807	-	244	161618078	-	BCAN_A0093	-	hypothetical protein
88	 56.74	0	96960..97100	-	46	161618079	-	BCAN_A0094	-	hypothetical protein
89	 60.27	0	97084..99771	-	895	161618080	acnA	BCAN_A0095	-	aconitate hydratase
90	 58.18	0	100115..100762	+	215	161618081	ccmA	BCAN_A0096	-	cytochrome c biogenesis protein CcmA
91	 62.31	+1	100762..101427	+	221	161618082	ccmB	BCAN_A0097	-	heme exporter protein CcmB
92	 58.52	0	101485..102270	+	261	161618083	ccmC	BCAN_A0098	-	heme exporter protein CcmC
93	 56.90	0	102267..102440	+	57	161618084	-	BCAN_A0099	-	Heme exporter protein D (CcmD)
94	 59.31	0	102437..103048	+	203	161618085	dsbE	BCAN_A0100	-	DsbE subfamily periplasmic protein thiol:disulfide oxidoreductase
95	 56.67	0	103235..103354	+	39	161618086	-	BCAN_A0101	-	hypothetical protein
96	 61.00	0	103297..105132	-	611	161618087	ilvD	BCAN_A0102	-	dihydroxy-acid dehydratase
97	 54.35	0	105314..105451	+	45	161618088	-	BCAN_A0103	-	hypothetical protein
98	 61.11	0	105532..105963	-	143	161618089	-	BCAN_A0104	-	hypothetical protein
99	 59.79	0	105990..106367	-	125	161618090	-	BCAN_A0105	-	response regulator receiver protein
100	 49.37	-1	106542..106778	-	78	161618091	-	BCAN_A0106	-	AsnC family transcriptional regulator
101	 57.04	0	107431..107835	+	134	161618092	-	BCAN_A0107	-	hypothetical protein
102	 57.02	0	107921..108625	-	234	161618093	-	BCAN_A0108	-	hypothetical protein
103	 53.85	0	108697..109515	+	272	161618094	-	BCAN_A0109	-	hypothetical protein
104	 57.63	0	109793..110821	+	342	161618095	-	BCAN_A0110	-	sulfate ABC transporter, sulfate-binding protein
105	 59.40	0	110916..111782	+	288	161618096	cysT	BCAN_A0111	-	sulfate ABC transporter, permease protein CysT
106	 59.05	0	111772..112638	+	288	161618097	cysW	BCAN_A0112	-	sulfate ABC transporter, permease protein CysW
107	 61.39	+1	112736..113815	+	359	161618098	cysA	BCAN_A0113	-	sulfate ABC transporter, ATP-binding protein
108	 60.51	0	114201..122804	+	2867	161618099	-	BCAN_A0114	-	glycosyltransferase 36
109	 58.47	0	122894..124198	+	434	161618100	pncB	BCAN_A0115	-	nicotinate phosphoribosyltransferase
110	 60.65	0	124240..125070	-	276	161618101	-	BCAN_A0116	-	PhzF family phenazine biosynthesis protein
111	 55.77	0	125180..125968	-	262	161618102	-	BCAN_A0117	-	methyltransferase type 11
112	 59.44	0	125991..126917	-	308	161618103	frk	BCAN_A0118	-	fructokinase
113	 59.60	0	127008..127814	-	268	161618104	-	BCAN_A0119	-	short-chain dehydrogenase/reductase SDR
114	 60.03	0	127935..130226	-	763	161618105	-	BCAN_A0120	-	1A family penicillin-binding protein
115	 56.13	0	130431..131123	-	230	161618106	ropB	BCAN_A0121	-	22 kDa outer membrane protein precursor
116	 56.19	0	131390..132076	-	228	161618107	ropB	BCAN_A0122	-	22 kDa outer membrane protein precursor
117	 56.15	0	132308..132925	-	205	161618108	-	BCAN_A0123	-	hypothetical protein
118	 59.39	0	132964..134379	-	471	161618109	-	BCAN_A0124	-	hypothetical protein
119	 52.61	-1	134610..134858	+	82	161618110	-	BCAN_A0125	-	hypothetical protein
120	 59.49	0	134940..137879	+	979	161618111	polA	BCAN_A0126	-	DNA polymerase I
121	 60.18	0	138021..139901	+	626	161618112	ydbR	BCAN_A0127	-	DEAD-box ATP-dependent RNA helicase ydbR
57.15	MEAN

4.17	STD DEV




Last Updated: Dec 04, 2008
      
Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.