IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
633	 60.28	0	642965..643543	+	192	161618624	pyrE	BCAN_A0666	-	orotate phosphoribosyltransferase
634	 57.01	0	643703..644458	+	251	161618625	fnrA	BCAN_A0667	-	transcriptional activator protein fnrA
635	 59.24	0	646356..647567	-	403	161618626	-	BCAN_A0669	-	major facilitator transporter
636	 58.62	0	647819..648601	+	260	161618627	-	BCAN_A0670	-	AraC family transcriptional regulator
637	 61.11	0	648651..649226	+	191	161618628	-	BCAN_A0671	-	hypothetical protein
638	 54.57	0	649223..649627	+	134	161618629	acpS	BCAN_A0672	-	4'-phosphopantetheinyl transferase
639	 56.58	0	649738..650520	+	260	161618630	lepB	BCAN_A0673	-	signal peptidase I
640	 58.81	0	650489..651226	+	245	161618631	rnc	BCAN_A0674	-	ribonuclease III
641	 54.55	0	651269..651367	+	32	161618632	-	BCAN_A0675	-	hypothetical protein
642	 57.59	0	651371..652306	+	311	161618633	era	BCAN_A0676	-	GTP-binding protein Era
643	 59.01	0	652333..653076	+	247	161618634	recO	BCAN_A0677	-	DNA repair protein RecO
644	 62.16	+1	653054..653563	-	169	161618635	-	BCAN_A0678	-	hypothetical protein
645	 59.90	0	653560..654180	-	206	161618636	-	BCAN_A0679	-	hypothetical protein
646	 57.64	0	654180..655043	-	287	161618637	-	BCAN_A0680	-	glycine cleavage T-protein barrel
647	 59.85	0	655129..656463	+	444	161618638	pyrC	BCAN_A0681	-	dihydroorotase
648	 58.82	0	656512..657276	-	254	161618639	-	BCAN_A0682	-	hypothetical protein
649	 51.31	-1	657325..657591	-	88	161618640	-	BCAN_A0683	-	hypothetical protein
650	 55.73	0	657748..658131	-	127	161618641	-	BCAN_A0684	-	hypothetical protein
651	 58.56	0	658211..658654	-	147	161618642	-	BCAN_A0685	-	NUDIX hydrolase
652	 60.51	0	658740..659519	+	259	161618643	-	BCAN_A0686	-	hypothetical protein
653	 60.16	0	659574..660188	+	204	161618644	-	BCAN_A0687	-	amino acid transporter yggA
654	 57.74	0	660165..660332	-	55	161618645	-	BCAN_A0688	-	hypothetical protein
655	 59.24	0	660699..662219	+	506	161618646	cysS	BCAN_A0689	-	cysteinyl-tRNA synthetase
656	 62.96	+1	662238..662372	+	44	161618647	-	BCAN_A0690	-	hypothetical protein
657	 59.29	0	662372..663985	+	537	161618648	-	BCAN_A0691	-	putative alpha-isopropylmalate/homocitrate synthase family transferase
658	 57.87	0	664232..665152	+	306	161618649	rarD	BCAN_A0692	-	RarD protein
659	 57.96	0	665285..667018	+	577	161618650	-	BCAN_A0693	-	peptidase M23B
660	 59.57	0	667086..667916	-	276	161618651	ksgA	BCAN_A0694	-	dimethyladenosine transferase
661	 60.37	0	667913..668944	-	343	161618652	pdxA	BCAN_A0695	-	4-hydroxythreonine-4-phosphate dehydrogenase
662	 56.74	0	669009..669965	-	318	161618653	surA	BCAN_A0696	-	chaperone surA precursor
663	 55.65	0	670276..672654	-	792	161618654	imp	BCAN_A0697	-	organic solvent tolerance protein precursor
664	 54.45	0	672675..673763	-	362	161618655	-	BCAN_A0698	-	permease YjgP/YjgQ family protein
665	 55.91	0	673760..674968	-	402	161618656	-	BCAN_A0699	-	permease YjgP/YjgQ family protein
666	 46.06	-2	675141..675305	-	54	161618657	-	BCAN_A0700	-	hypothetical protein
667	 58.63	0	675378..676871	+	497	161618658	pepA	BCAN_A0701	-	leucyl aminopeptidase
668	 56.44	0	676943..677392	+	149	161618659	-	BCAN_A0702	-	DNA polymerase III subunit chi
669	 62.06	+1	677392..677955	+	187	161618660	-	BCAN_A0703	-	hypothetical protein
670	 58.70	0	678032..679915	-	627	161618661	-	BCAN_A0704	-	ATP-binding sub-family F member 3 protein
671	 56.92	0	679958..680470	-	170	161618662	-	BCAN_A0705	-	DinB family protein
672	 57.68	0	680699..681121	+	140	161618663	ndk	BCAN_A0706	-	nucleoside diphosphate kinase
673	 57.21	0	681230..682033	-	267	161618664	-	BCAN_A0707	-	protein of unknown function DUF306 Meta and HslJ
674	 56.71	0	682269..682760	-	163	161618665	-	BCAN_A0708	-	molybdopterin biosynthesis MoaE protein
675	 53.49	0	682762..683019	-	85	161618666	moaD	BCAN_A0709	-	molybdopterin converting factor, subunit 1
676	 55.38	0	683024..683608	-	194	161618667	pgsA	BCAN_A0710	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
677	 59.53	0	683727..685799	-	690	161618668	uvrC	BCAN_A0711	-	excinuclease ABC subunit C
678	 59.26	0	685799..686554	-	251	161618669	fabG	BCAN_A0712	-	short chain dehydrogenase
679	 57.94	0	686956..687597	+	213	161618670	-	BCAN_A0713	-	25 kDa outer-membrane immunogenic protein precursor
680	 57.67	0	687694..688293	-	199	161618671	-	BCAN_A0714	-	glutathione S-transferase domain-containing protein
681	 55.37	0	688211..688387	-	58	161618672	-	BCAN_A0715	-	hypothetical protein
682	 58.55	0	688348..689037	-	229	161618673	-	BCAN_A0716	-	ribonuclease precursor
683	 61.57	+1	689050..689520	-	156	161618674	-	BCAN_A0717	-	hypothetical protein
684	 58.08	0	689603..690475	-	290	161618675	-	BCAN_A0718	-	hypothetical protein
685	 62.41	+1	690631..691476	+	281	161618676	-	BCAN_A0719	-	hypothetical protein
686	 59.43	0	691554..693680	+	708	161618677	-	BCAN_A0720	-	nitrate reductase
687	 62.86	+1	693907..694431	-	174	161618678	-	BCAN_A0721	-	hypothetical protein
688	 59.71	0	694607..695224	-	205	161618679	purN	BCAN_A0722	-	phosphoribosylglycinamide formyltransferase
689	 60.74	0	695221..696300	-	359	161618680	purM	BCAN_A0723	-	phosphoribosylaminoimidazole synthetase
690	 51.67	-1	696342..696521	-	59	161618681	-	BCAN_A0724	-	hypothetical protein
691	 49.63	-1	696649..696783	-	44	161618682	-	BCAN_A0725	-	hypothetical protein
692	 56.14	0	696790..697938	+	382	161618683	-	BCAN_A0726	-	hypothetical protein
693	 60.20	0	697978..698673	+	231	161618684	-	BCAN_A0727	-	hypothetical protein
694	 58.74	0	698670..699539	+	289	161618685	galE	BCAN_A0728	-	UDP-glucose 4-epimerase
695	 62.34	+1	699536..700321	-	261	161618686	-	BCAN_A0729	-	hypothetical protein
696	 58.30	0	700394..701098	-	234	161618687	-	BCAN_A0730	-	3-oxoacyl-(acyl-carrier-protein) reductase
697	 50.00	-1	701260..701475	-	71	161618688	-	BCAN_A0731	-	hypothetical protein
698	 39.74	-2	701489..701644	+	51	161618689	-	BCAN_A0732	-	hypothetical protein
699	 58.42	0	701797..703470	-	557	161618690	-	BCAN_A0733	-	L-lactate transport
700	 53.27	0	704004..704309	+	101	161618691	-	BCAN_A0735	-	NADH-ubiquinone oxidoreductase
701	 56.01	0	704875..705465	+	196	161618692	-	BCAN_A0737	-	hypothetical protein
702	 52.61	-1	705686..706297	-	203	161618693	-	BCAN_A0738	-	hypothetical protein
703	 53.48	0	706622..707167	-	181	161618694	-	BCAN_A0739	-	adenylate kinase
704	 52.12	-1	707164..708435	-	423	161618695	-	BCAN_A0740	-	GCN5-related N-acetyltransferase
705	 51.45	-1	708377..709171	-	264	161618696	-	BCAN_A0741	-	helix-turn-helix domain-containing protein
706	 43.33	-2	709196..709615	-	139	161618697	-	BCAN_A0742	-	hypothetical protein
707	 53.29	0	709995..710891	+	298	161618698	-	BCAN_A0743	-	hypothetical protein
708	 52.56	-1	711270..713006	+	578	161618699	-	BCAN_A0744	-	integrase catalytic subunit
709	 52.05	-1	712999..713949	+	316	161618700	-	BCAN_A0745	-	transposition protein
710	 48.10	-2	713946..715523	+	525	161618701	-	BCAN_A0746	-	hypothetical protein
711	 47.98	-2	715822..716019	-	65	161618702	-	BCAN_A0747	-	hypothetical protein
712	 46.56	-2	716260..717567	+	435	161618703	-	BCAN_A0748	-	hypothetical protein
713	 60.04	0	718021..719394	+	457	161618704	-	BCAN_A0749	-	hypothetical protein
714	 57.00	0	719483..720361	+	292	161618705	-	BCAN_A0750	-	hypothetical protein
715	 62.38	+1	720745..721257	-	170	161618706	-	BCAN_A0751	-	SH3 type 3 domain-containing protein
716	 59.84	0	721417..721665	-	82	161618707	-	BCAN_A0752	-	lipoprotein
717	 48.72	-2	721768..721923	-	51	161618708	-	BCAN_A0753	-	hypothetical protein
718	 56.15	0	721910..723079	-	389	161618709	metC	BCAN_A0754	-	cystathionine beta-lyase
719	 56.77	0	723290..724057	+	255	161618710	bcrC	BCAN_A0755	-	bacitracin transport permease protein BCRC
720	 55.33	0	724513..725544	+	343	161618711	-	BCAN_A0756	-	lysine-arginine-ornithine-binding periplasmic protein
721	 54.82	0	725578..725805	+	75	161618712	-	BCAN_A0757	-	hypothetical protein
722	 56.70	0	725841..727034	+	397	161618713	-	BCAN_A0758	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
723	 58.38	0	727037..728194	+	385	161618714	-	BCAN_A0759	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
724	 54.90	0	728209..729024	+	271	161618715	bztD	BCAN_A0760	-	glutamate/glutamine/aspartate/asparagine transport ATP-binding protein bztD
725	 59.12	0	729072..730277	-	401	161618716	-	BCAN_A0761	-	salicylate hydroxylase
726	 54.51	0	730307..730561	-	84	161618717	-	BCAN_A0762	-	hypothetical protein
727	 59.19	0	733082..734620	+	512	161618718	-	BCAN_A0764	-	Ppx/GppA phosphatase
728	 60.49	0	734782..735930	-	382	161618719	rnd	BCAN_A0765	-	ribonuclease D
729	 58.45	0	736157..737944	+	595	161618720	aspS	BCAN_A0766	-	aspartyl-tRNA synthetase
730	 55.64	0	738028..739224	-	398	161618721	-	BCAN_A0767	-	hypothetical protein
731	 46.67	-2	739279..739518	+	79	161618722	-	BCAN_A0768	-	hypothetical protein
732	 58.11	0	739624..741936	+	770	161618723	parC	BCAN_A0769	-	DNA topoisomerase IV subunit A
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.