IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
591	 59.04	0	595633..596130	+	165	161618582	ccmE	BCAN_A0623	-	cytochrome c-type biogenesis protein CcmE
592	 59.99	0	596150..598141	+	663	161618583	ccmF	BCAN_A0624	-	cytochrome c-type biogenesis protein CcmF
593	 56.18	0	598138..598614	+	158	161618584	-	BCAN_A0625	-	cytochrome c-type biogenesis protein ccl2 precursor
594	 56.32	0	598499..598672	+	57	161618585	-	BCAN_A0626	-	hypothetical protein
595	 60.51	0	598756..600297	+	513	161618586	degP	BCAN_A0627	-	protease Do
596	 60.31	0	600391..601098	+	235	161618587	copR	BCAN_A0628	-	transcriptional activator protein copR
597	 59.19	0	601098..602501	+	467	161618588	-	BCAN_A0629	-	integral membrane sensor signal transduction histidine kinase
598	 58.43	0	602624..605575	+	983	161618589	glnE	BCAN_A0630	-	glutamate-ammonia-ligase adenylyltransferase
599	 50.52	-1	605620..607731	-	703	161618590	lgtB	BCAN_A0631	-	lacto-N-neotetraose biosynthesis glycosyl transferase lgtB
600	 60.71	0	608002..610353	-	783	161618591	-	BCAN_A0632	-	multi-sensor signal transduction histidine kinase
601	 59.28	0	610744..613395	-	883	161618592	pepN	BCAN_A0633	-	aminopeptidase N
602	 58.70	0	613564..614580	+	338	161618593	-	BCAN_A0634	-	hypothetical protein
603	 58.87	0	614585..615841	-	418	161618594	-	BCAN_A0635	-	major facilitator transporter
604	 61.40	+1	616003..616875	-	290	161618595	-	BCAN_A0636	-	uracil-DNA glycosylase
605	 59.22	0	617264..618955	+	563	161618596	-	BCAN_A0637	-	electron transfer flavoprotein-ubiquinone oxidoreductase
606	 59.24	0	619071..620147	-	358	161618597	-	BCAN_A0638	-	hypothetical protein
607	 58.42	0	620200..621702	-	500	161618598	amn	BCAN_A0639	-	AMP nucleosidase
608	 55.97	0	621755..621913	+	52	161618599	-	BCAN_A0640	-	hypothetical protein
609	 51.77	-1	621910..622191	+	93	161618600	-	BCAN_A0641	-	hypothetical protein
610	 54.71	0	622269..622979	+	236	161618601	-	BCAN_A0642	-	glutathione S-transferase domain-containing protein
611	 57.76	0	623038..623385	-	115	161618602	-	BCAN_A0643	-	hypothetical protein
612	 53.26	0	623382..623672	-	96	161618603	-	BCAN_A0644	-	hypothetical protein
613	 57.36	0	623891..624148	+	85	161618604	-	BCAN_A0645	-	hypothetical protein
614	 55.04	0	624208..624981	-	257	161618605	-	BCAN_A0646	-	hypothetical protein
615	 57.60	0	625635..626285	+	216	161618606	-	BCAN_A0647	-	hypothetical protein
616	 62.13	+1	626330..626704	-	124	161618607	-	BCAN_A0648	-	hypothetical protein
617	 55.64	0	626722..627855	-	377	161618608	hisC	BCAN_A0649	-	histidinol-phosphate aminotransferase
618	 52.21	-1	628218..629144	-	308	161618609	xerC	BCAN_A0650	-	tyrosine recombinase xerC
619	 56.79	0	629418..630521	-	367	161618610	ropA	BCAN_A0651	-	Outer membrane protein IIIA precursor
620	 56.91	0	631322..632449	+	375	161618611	ropA	BCAN_A0653	-	Outer membrane protein IIIA precursor
621	 53.58	0	632593..633234	+	213	161618612	-	BCAN_A0654	-	hypothetical protein
622	 49.18	-1	633290..633472	+	60	161618613	-	BCAN_A0655	-	hypothetical protein
623	 57.78	0	633534..634208	+	224	161618614	-	BCAN_A0656	-	hypothetical protein
624	 59.67	0	634271..636328	-	685	161618615	-	BCAN_A0657	-	lytic transglycosylase catalytic
625	 60.61	0	636252..636416	+	54	161618616	-	BCAN_A0658	-	hypothetical protein
626	 56.92	0	636804..637685	+	293	161618617	dapA	BCAN_A0659	-	dihydrodipicolinate synthase
627	 55.77	0	637776..638252	+	158	161618618	smpB	BCAN_A0660	-	SsrA-binding protein
628	 58.18	0	638389..639060	-	223	161618619	-	BCAN_A0661	-	uracil-DNA glycosylase superfamily protein
629	 53.99	0	639091..639666	-	191	161618620	-	BCAN_A0662	-	hypothetical protein
630	 35.26	-2	639866..640021	-	51	161618621	-	BCAN_A0663	-	hypothetical protein
631	 56.22	0	640063..640464	+	133	161618622	rpoZ	BCAN_A0664	-	DNA-directed RNA polymerase subunit omega
632	 57.75	0	640705..642957	+	750	161618623	-	BCAN_A0665	-	RelA/SpoT family protein
633	 60.28	0	642965..643543	+	192	161618624	pyrE	BCAN_A0666	-	orotate phosphoribosyltransferase
634	 57.01	0	643703..644458	+	251	161618625	fnrA	BCAN_A0667	-	transcriptional activator protein fnrA
635	 59.24	0	646356..647567	-	403	161618626	-	BCAN_A0669	-	major facilitator transporter
636	 58.62	0	647819..648601	+	260	161618627	-	BCAN_A0670	-	AraC family transcriptional regulator
637	 61.11	0	648651..649226	+	191	161618628	-	BCAN_A0671	-	hypothetical protein
638	 54.57	0	649223..649627	+	134	161618629	acpS	BCAN_A0672	-	4'-phosphopantetheinyl transferase
639	 56.58	0	649738..650520	+	260	161618630	lepB	BCAN_A0673	-	signal peptidase I
640	 58.81	0	650489..651226	+	245	161618631	rnc	BCAN_A0674	-	ribonuclease III
641	 54.55	0	651269..651367	+	32	161618632	-	BCAN_A0675	-	hypothetical protein
642	 57.59	0	651371..652306	+	311	161618633	era	BCAN_A0676	-	GTP-binding protein Era
643	 59.01	0	652333..653076	+	247	161618634	recO	BCAN_A0677	-	DNA repair protein RecO
644	 62.16	+1	653054..653563	-	169	161618635	-	BCAN_A0678	-	hypothetical protein
645	 59.90	0	653560..654180	-	206	161618636	-	BCAN_A0679	-	hypothetical protein
646	 57.64	0	654180..655043	-	287	161618637	-	BCAN_A0680	-	glycine cleavage T-protein barrel
647	 59.85	0	655129..656463	+	444	161618638	pyrC	BCAN_A0681	-	dihydroorotase
648	 58.82	0	656512..657276	-	254	161618639	-	BCAN_A0682	-	hypothetical protein
649	 51.31	-1	657325..657591	-	88	161618640	-	BCAN_A0683	-	hypothetical protein
650	 55.73	0	657748..658131	-	127	161618641	-	BCAN_A0684	-	hypothetical protein
651	 58.56	0	658211..658654	-	147	161618642	-	BCAN_A0685	-	NUDIX hydrolase
652	 60.51	0	658740..659519	+	259	161618643	-	BCAN_A0686	-	hypothetical protein
653	 60.16	0	659574..660188	+	204	161618644	-	BCAN_A0687	-	amino acid transporter yggA
654	 57.74	0	660165..660332	-	55	161618645	-	BCAN_A0688	-	hypothetical protein
655	 59.24	0	660699..662219	+	506	161618646	cysS	BCAN_A0689	-	cysteinyl-tRNA synthetase
656	 62.96	+1	662238..662372	+	44	161618647	-	BCAN_A0690	-	hypothetical protein
657	 59.29	0	662372..663985	+	537	161618648	-	BCAN_A0691	-	putative alpha-isopropylmalate/homocitrate synthase family transferase
658	 57.87	0	664232..665152	+	306	161618649	rarD	BCAN_A0692	-	RarD protein
659	 57.96	0	665285..667018	+	577	161618650	-	BCAN_A0693	-	peptidase M23B
660	 59.57	0	667086..667916	-	276	161618651	ksgA	BCAN_A0694	-	dimethyladenosine transferase
661	 60.37	0	667913..668944	-	343	161618652	pdxA	BCAN_A0695	-	4-hydroxythreonine-4-phosphate dehydrogenase
662	 56.74	0	669009..669965	-	318	161618653	surA	BCAN_A0696	-	chaperone surA precursor
663	 55.65	0	670276..672654	-	792	161618654	imp	BCAN_A0697	-	organic solvent tolerance protein precursor
664	 54.45	0	672675..673763	-	362	161618655	-	BCAN_A0698	-	permease YjgP/YjgQ family protein
665	 55.91	0	673760..674968	-	402	161618656	-	BCAN_A0699	-	permease YjgP/YjgQ family protein
666	 46.06	-2	675141..675305	-	54	161618657	-	BCAN_A0700	-	hypothetical protein
667	 58.63	0	675378..676871	+	497	161618658	pepA	BCAN_A0701	-	leucyl aminopeptidase
668	 56.44	0	676943..677392	+	149	161618659	-	BCAN_A0702	-	DNA polymerase III subunit chi
669	 62.06	+1	677392..677955	+	187	161618660	-	BCAN_A0703	-	hypothetical protein
670	 58.70	0	678032..679915	-	627	161618661	-	BCAN_A0704	-	ATP-binding sub-family F member 3 protein
671	 56.92	0	679958..680470	-	170	161618662	-	BCAN_A0705	-	DinB family protein
672	 57.68	0	680699..681121	+	140	161618663	ndk	BCAN_A0706	-	nucleoside diphosphate kinase
673	 57.21	0	681230..682033	-	267	161618664	-	BCAN_A0707	-	protein of unknown function DUF306 Meta and HslJ
674	 56.71	0	682269..682760	-	163	161618665	-	BCAN_A0708	-	molybdopterin biosynthesis MoaE protein
675	 53.49	0	682762..683019	-	85	161618666	moaD	BCAN_A0709	-	molybdopterin converting factor, subunit 1
676	 55.38	0	683024..683608	-	194	161618667	pgsA	BCAN_A0710	-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
677	 59.53	0	683727..685799	-	690	161618668	uvrC	BCAN_A0711	-	excinuclease ABC subunit C
678	 59.26	0	685799..686554	-	251	161618669	fabG	BCAN_A0712	-	short chain dehydrogenase
679	 57.94	0	686956..687597	+	213	161618670	-	BCAN_A0713	-	25 kDa outer-membrane immunogenic protein precursor
680	 57.67	0	687694..688293	-	199	161618671	-	BCAN_A0714	-	glutathione S-transferase domain-containing protein
681	 55.37	0	688211..688387	-	58	161618672	-	BCAN_A0715	-	hypothetical protein
682	 58.55	0	688348..689037	-	229	161618673	-	BCAN_A0716	-	ribonuclease precursor
683	 61.57	+1	689050..689520	-	156	161618674	-	BCAN_A0717	-	hypothetical protein
684	 58.08	0	689603..690475	-	290	161618675	-	BCAN_A0718	-	hypothetical protein
685	 62.41	+1	690631..691476	+	281	161618676	-	BCAN_A0719	-	hypothetical protein
686	 59.43	0	691554..693680	+	708	161618677	-	BCAN_A0720	-	nitrate reductase
687	 62.86	+1	693907..694431	-	174	161618678	-	BCAN_A0721	-	hypothetical protein
688	 59.71	0	694607..695224	-	205	161618679	purN	BCAN_A0722	-	phosphoribosylglycinamide formyltransferase
689	 60.74	0	695221..696300	-	359	161618680	purM	BCAN_A0723	-	phosphoribosylaminoimidazole synthetase
690	 51.67	-1	696342..696521	-	59	161618681	-	BCAN_A0724	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.