IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
472	 49.65	-1	490158..490298	-	46	161618463	-	BCAN_A0499	-	hypothetical protein
473	 60.05	0	490492..491625	+	377	161618464	-	BCAN_A0500	-	modification methylase HinfI
474	 57.61	0	491708..492325	-	205	161618465	-	BCAN_A0501	-	HAD family hydrolase
475	 61.10	0	492322..493398	-	358	161618466	mutY	BCAN_A0502	-	A/G-specific adenine glycosylase
476	 61.17	0	493672..494199	+	175	161618467	-	BCAN_A0503	-	hypothetical protein
477	 52.30	-1	494217..494390	+	57	161618468	-	BCAN_A0504	-	hypothetical protein
478	 54.43	0	494437..495090	+	217	161618469	-	BCAN_A0505	-	DSBA oxidoreductase
479	 63.57	+1	495169..498627	+	1152	161618470	smc	BCAN_A0506	-	chromosome segregation protein SMC
480	 58.05	0	498650..499543	+	297	161618471	-	BCAN_A0507	-	cation diffusion facilitator family transporter
481	 57.10	0	499653..500018	-	121	161618472	-	BCAN_A0508	-	hypothetical protein
482	 60.77	0	500258..502921	+	887	161618473	ppdK	BCAN_A0509	-	pyruvate phosphate dikinase
483	 59.70	0	503886..504674	+	262	161618474	-	BCAN_A0512	-	hypothetical protein
484	 61.26	0	504675..505580	-	301	161618475	-	BCAN_A0513	-	beta-lactamase domain-containing protein
485	 59.33	0	505781..506380	+	199	161618476	bioY	BCAN_A0514	-	protein bioY
486	 56.08	0	506534..507043	+	169	161618477	allA	BCAN_A0515	-	ureidoglycolate hydrolase
487	 57.98	0	507055..507411	+	118	161618478	pucM	BCAN_A0516	-	hydroxyisourate hydrolase
488	 57.83	0	507482..508318	+	278	161618479	-	BCAN_A0517	-	hypothetical protein
489	 56.52	0	508807..510492	+	561	161618480	capD	BCAN_A0518	-	capsular polysaccharide biosynthesis protein capD
490	 60.35	0	510565..510849	+	94	161618481	-	BCAN_A0519	-	hypothetical protein
491	 49.29	-1	511235..511516	-	93	161618482	-	BCAN_A0520	-	hypothetical protein
492	 58.24	0	512018..512836	+	272	161618483	-	BCAN_A0522	-	transposase for insertion sequence element IS6501
493	 58.67	0	512568..513155	+	195	161618484	-	BCAN_A0523	-	insertion sequence transposase protein
494	 54.33	0	513212..513511	+	99	161618485	-	BCAN_A0524	-	insertion sequence transposase protein
495	 54.11	0	513568..513798	+	76	161618486	-	BCAN_A0525	-	transposase IS4
496	 55.68	0	513923..514186	-	87	161618487	-	BCAN_A0526	-	hypothetical protein
497	 53.17	0	514049..514174	+	41	161618488	-	BCAN_A0527	-	hypothetical protein
498	 56.43	0	514168..514890	+	240	161618489	-	BCAN_A0528	-	hypothetical protein
499	 45.13	-2	515230..516009	-	259	161618490	arnA	BCAN_A0529	-	bifunctional polymyxin resistance arnA protein
500	 44.21	-2	516036..516890	-	284	161618491	-	BCAN_A0530	-	WbcT protein
501	 48.88	-1	516887..517645	-	252	161618492	rfbB	BCAN_A0531	-	O-antigen export system ATP-binding protein rfbB
502	 45.98	-2	517642..518424	-	260	161618493	rfbD	BCAN_A0532	-	O-antigen export system permease protein rfbD
503	 47.19	-2	518439..519542	-	367	161618494	rbmB	BCAN_A0533	-	L-glutamine:2-deoxy-scyllo-inosose aminotransferase
504	 47.93	-2	519550..520638	-	362	161618495	gmd	BCAN_A0534	-	GDP-mannose 4,6-dehydratase
505	 60.14	0	521157..521585	+	142	161618496	-	BCAN_A0535	-	hypothetical protein
506	 58.93	0	521504..521878	+	124	161618497	-	BCAN_A0536	-	transposase for insertion sequence element IS6501
507	 53.08	0	521908..522702	+	264	161618498	-	BCAN_A0537	-	integrase catalytic subunit
508	 58.81	0	522772..523140	+	122	161618499	-	BCAN_A0538	-	transposase for insertion sequence element IS6501
509	 53.76	0	523137..523415	+	92	161618500	-	BCAN_A0539	-	transposase for insertion sequence element IS6501
510	 54.17	0	523532..523771	+	79	161618501	-	BCAN_A0540	-	transposase
511	 43.88	-2	523902..525020	+	372	161618502	-	BCAN_A0541	-	mannosyltransferase
512	 47.66	-2	525541..525882	+	113	161618503	-	BCAN_A0542	-	transposase
513	 44.44	-2	525777..525902	-	41	161618504	-	BCAN_A0543	-	IS3 family transposase orfB
514	 54.76	0	525901..525942	+	13	161618505	-	BCAN_A0544	-	hypothetical protein
515	 54.42	0	525972..526559	-	195	161618506	-	BCAN_A0545	-	hypothetical protein
516	 60.14	0	526691..527119	+	142	161618507	-	BCAN_A0546	-	hypothetical protein
517	 57.31	0	527038..527454	+	138	161618508	-	BCAN_A0547	-	transposase
518	 54.00	0	527814..528113	+	99	161618509	-	BCAN_A0548	-	transposase IS629
519	 50.37	-1	528345..529682	+	445	161618510	manB	BCAN_A0549	-	phosphomannomutase
520	 51.23	-1	529707..531131	+	474	161618511	-	BCAN_A0550	-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
521	 51.32	-1	531164..532336	+	390	161618512	-	BCAN_A0551	-	hypothetical protein
522	 51.26	-1	532419..533528	+	369	161618513	-	BCAN_A0552	-	glycosyltransferase
523	 46.67	-2	534009..534188	-	59	161618514	-	BCAN_A0553	-	hypothetical protein
524	 56.97	0	534220..535755	+	511	161618515	rbsA	BCAN_A0554	-	ribose import ATP-binding protein rbsA
525	 56.89	0	535776..536777	+	333	161618516	-	BCAN_A0555	-	monosaccharide-transporting ATPase
526	 57.52	0	536604..537587	-	327	161618517	-	BCAN_A0556	-	hypothetical protein
527	 57.11	0	536856..537818	+	320	161618518	-	BCAN_A0557	-	hypothetical protein
528	 58.02	0	537876..538928	+	350	161618519	-	BCAN_A0558	-	hypothetical protein
529	 59.68	0	538936..540108	+	390	161618520	-	BCAN_A0559	-	oxidoreductase domain-containing protein
530	 56.35	0	540150..541457	-	435	161618521	xylA	BCAN_A0560	-	xylose isomerase
531	 61.78	+1	541504..542955	-	483	161618522	xylB	BCAN_A0561	-	xylulokinase
532	 59.50	0	542988..544019	-	343	161618523	degA	BCAN_A0562	-	HTH-type transcriptional regulator degA
533	 57.89	0	544281..545351	-	356	161618524	-	BCAN_A0563	-	helix-turn-helix domain-containing protein
534	 58.74	0	545890..547353	-	487	161618525	betB	BCAN_A0564	-	betaine aldehyde dehydrogenase
535	 59.76	0	547539..549188	-	549	161618526	betA	BCAN_A0565	-	choline dehydrogenase
536	 58.63	0	549191..549787	-	198	161618527	betI	BCAN_A0566	-	transcriptional regulator BetI
537	 60.70	0	549978..551000	+	340	161618528	-	BCAN_A0567	-	L-asparaginase II protein
538	 59.02	0	551045..551515	+	156	161618529	greA	BCAN_A0568	-	transcription elongation factor GreA
539	 50.26	-1	551512..551901	-	129	161618530	-	BCAN_A0569	-	death-on-curing family protein
540	 51.52	-1	551898..552128	-	76	161618531	-	BCAN_A0570	-	addiction module antidote
541	 55.79	0	552189..553181	-	330	161618532	-	BCAN_A0571	-	Mg2 transporter protein CorA family protein
542	 60.47	0	553337..554014	+	225	161618533	-	BCAN_A0572	-	GntR domain-containing protein
543	 61.63	+1	554011..555321	+	436	161618534	-	BCAN_A0573	-	major facilitator transporter
544	 60.61	0	555378..555740	-	120	161618535	-	BCAN_A0574	-	hypothetical protein
545	 59.66	0	556076..557587	+	503	161618536	-	BCAN_A0575	-	protein of unknown function DUF853 NPT hydrolase
546	 48.48	-2	557629..557727	+	32	161618537	-	BCAN_A0576	-	hypothetical protein
547	 60.81	0	557785..558501	-	238	161618538	-	BCAN_A0577	-	ErfK/YbiS/YcfS/YnhG family protein
548	 58.10	0	558804..559457	-	217	161618539	dehII	BCAN_A0578	-	haloacid dehalogenase, type II
549	 54.33	0	559680..560279	+	199	161618540	sodB	BCAN_A0579	-	superoxide dismutase (Fe)
550	 56.60	0	560325..560900	+	191	161618541	-	BCAN_A0580	-	hypothetical protein
551	 58.14	0	560451..560837	-	128	161618542	-	BCAN_A0581	-	hypothetical protein
552	 57.75	0	560904..563012	-	702	161618543	ptrB	BCAN_A0582	-	protease 2
553	 44.10	-2	563436..563630	+	64	161618544	-	BCAN_A0583	-	hypothetical protein
554	 53.61	0	563585..564013	+	142	161618545	rosAR	BCAN_A0584	-	transcriptional regulatory protein rosAr
555	 54.49	0	564221..564532	-	103	161618546	-	BCAN_A0585	-	hypothetical protein
556	 56.80	0	564713..565168	+	151	161618547	-	BCAN_A0586	-	hypothetical protein
557	 59.50	0	565165..565959	+	264	161618548	-	BCAN_A0587	-	hypothetical protein
558	 60.24	0	566050..567387	+	445	161618549	iaaH	BCAN_A0588	-	amidase
559	 59.62	0	567428..567853	-	141	161618550	-	BCAN_A0589	-	hypothetical protein
560	 56.44	0	567933..568382	-	149	161618551	-	BCAN_A0590	-	hypothetical protein
561	 59.18	0	568673..570502	+	609	161618552	-	BCAN_A0591	-	integral membrane sensor signal transduction histidine kinase
562	 60.28	0	570429..571445	+	338	161618553	-	BCAN_A0592	-	peptidoglycan binding domain-containing protein
563	 57.18	0	571459..571806	+	115	161618554	-	BCAN_A0593	-	hypothetical protein
564	 58.50	0	571817..572893	-	358	161618555	-	BCAN_A0594	-	hypothetical protein
565	 55.06	0	573091..573633	-	180	161618556	-	BCAN_A0595	-	hypothetical protein
566	 62.91	+1	573626..574237	-	203	161618557	-	BCAN_A0596	-	hypothetical protein
567	 59.20	0	574244..576400	-	718	161618558	-	BCAN_A0597	-	1A family penicillin-binding protein
568	 60.04	0	576758..577270	+	170	161618559	-	BCAN_A0598	-	hypothetical protein
569	 64.89	+1	577233..578468	+	411	161618560	-	BCAN_A0599	-	hypothetical protein
570	 61.89	+1	578500..579693	+	397	161618561	-	BCAN_A0600	-	HK97 family phage portal protein
571	 61.64	+1	579690..580067	+	125	161618562	-	BCAN_A0601	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.