IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
428	 48.99	-1	447543..447740	+	65	161618419	-	BCAN_A0451	-	hypothetical protein
429	 58.20	0	447836..448414	-	192	161618420	-	BCAN_A0452	-	colicin V production protein
430	 62.18	+1	448540..449943	-	467	161618421	radA	BCAN_A0453	-	DNA repair protein RadA
431	 58.63	0	449971..451476	-	501	161618422	dnaB	BCAN_A0454	-	replicative DNA helicase
432	 58.25	0	453327..453896	-	189	161618423	rplI	BCAN_A0457	-	50S ribosomal protein L9
433	 61.83	+1	453926..454897	-	323	161618424	-	BCAN_A0458	-	hypothetical protein
434	 58.63	0	455048..455296	-	82	161618425	rpsR	BCAN_A0459	-	30S ribosomal protein S18
435	 61.74	+1	455299..455745	-	148	161618426	rpsF	BCAN_A0460	-	30S ribosomal protein S6
436	 54.72	0	455770..456129	-	119	161618427	-	BCAN_A0461	-	hypothetical protein
437	 61.69	+1	456151..457095	+	314	161618428	fabD	BCAN_A0462	-	malonyl CoA-acyl carrier protein transacylase
438	 59.08	0	457165..457902	+	245	161618429	fabG	BCAN_A0463	-	3-ketoacyl-(acyl-carrier-protein) reductase NodG
439	 53.59	0	458176..458412	+	78	161618430	acpP	BCAN_A0464	-	acyl carrier protein
440	 57.95	0	458416..458679	+	87	161618431	-	BCAN_A0465	-	hypothetical protein
441	 61.84	+1	458736..459998	+	420	161618432	-	BCAN_A0466	-	3-oxoacyl-(acyl carrier protein) synthase II
442	 59.08	0	460223..461461	+	412	161618433	-	BCAN_A0467	-	hypothetical protein
443	 61.44	+1	461646..462545	+	299	161618434	-	BCAN_A0468	-	hypothetical protein
444	 57.62	0	462554..463216	+	220	161618435	gmk	BCAN_A0469	-	guanylate kinase
445	 61.08	0	463243..464655	-	470	161618436	tldD	BCAN_A0470	-	TldD protein
446	 63.96	+1	464797..465423	-	208	161618437	-	BCAN_A0471	-	invasion associated locus B family protein
447	 62.37	+1	465621..465713	-	30	161618438	-	BCAN_A0472	-	hypothetical protein
448	 58.60	0	465857..466711	+	284	161618439	coxB	BCAN_A0473	-	cytochrome c oxidase, subunit II
449	 59.86	0	466849..468507	+	552	161618440	ctaD	BCAN_A0474	-	cytochrome c oxidase, subunit I
450	 58.97	0	468735..469682	+	315	161618441	cyoE	BCAN_A0475	-	protoheme IX farnesyltransferase
451	 60.22	0	469682..469867	+	61	161618442	-	BCAN_A0476	-	hypothetical protein
452	 57.10	0	469887..470492	+	201	161618443	ctaG	BCAN_A0477	-	cytochrome C oxidase assembly protein
453	 57.79	0	470701..471579	+	292	161618444	-	BCAN_A0478	-	cytochrome c oxidase subunit 3
454	 57.29	0	471693..472076	+	127	161618445	-	BCAN_A0479	-	hypothetical protein
455	 57.82	0	472853..473971	+	372	161618446	ispH	BCAN_A0482	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
456	 58.72	0	473977..474957	+	326	161618447	thrB	BCAN_A0483	-	homoserine kinase
457	 59.78	0	474954..475418	+	154	161618448	-	BCAN_A0484	-	ribonuclease H
458	 58.44	0	475448..475933	-	161	161618449	-	BCAN_A0485	-	redoxin domain-containing protein
459	 59.55	0	476113..476913	-	266	161618450	-	BCAN_A0486	-	hypothetical protein
460	 59.04	0	477048..477650	+	200	161618451	-	BCAN_A0487	-	hypothetical protein
461	 60.14	0	477748..480642	-	964	161618452	-	BCAN_A0488	-	diguanylate cyclase
462	 55.88	0	480639..481259	-	206	161618453	-	BCAN_A0489	-	GCN5-related N-acetyltransferase
463	 59.01	0	481430..482722	-	430	161618454	-	BCAN_A0490	-	hypothetical protein
464	 58.69	0	482776..484167	-	463	161618455	thrC	BCAN_A0491	-	threonine synthase
465	 47.62	-2	484247..484498	-	83	161618456	-	BCAN_A0492	-	hypothetical protein
466	 55.27	0	484649..485227	+	192	161618457	-	BCAN_A0493	-	lipoprotein
467	 56.27	0	485541..487175	+	544	161618458	-	BCAN_A0494	-	hypothetical protein
468	 36.46	-2	487225..487320	+	31	161618459	-	BCAN_A0495	-	hypothetical protein
469	 56.45	0	487304..487489	+	61	161618460	-	BCAN_A0496	-	hypothetical protein
470	 59.83	0	487531..488217	-	228	161618461	-	BCAN_A0497	-	HAD family hydrolase
471	 61.81	+1	488365..490155	-	596	161618462	-	BCAN_A0498	-	chloride channel protein clcB-like protein
472	 49.65	-1	490158..490298	-	46	161618463	-	BCAN_A0499	-	hypothetical protein
473	 60.05	0	490492..491625	+	377	161618464	-	BCAN_A0500	-	modification methylase HinfI
474	 57.61	0	491708..492325	-	205	161618465	-	BCAN_A0501	-	HAD family hydrolase
475	 61.10	0	492322..493398	-	358	161618466	mutY	BCAN_A0502	-	A/G-specific adenine glycosylase
476	 61.17	0	493672..494199	+	175	161618467	-	BCAN_A0503	-	hypothetical protein
477	 52.30	-1	494217..494390	+	57	161618468	-	BCAN_A0504	-	hypothetical protein
478	 54.43	0	494437..495090	+	217	161618469	-	BCAN_A0505	-	DSBA oxidoreductase
479	 63.57	+1	495169..498627	+	1152	161618470	smc	BCAN_A0506	-	chromosome segregation protein SMC
480	 58.05	0	498650..499543	+	297	161618471	-	BCAN_A0507	-	cation diffusion facilitator family transporter
481	 57.10	0	499653..500018	-	121	161618472	-	BCAN_A0508	-	hypothetical protein
482	 60.77	0	500258..502921	+	887	161618473	ppdK	BCAN_A0509	-	pyruvate phosphate dikinase
483	 59.70	0	503886..504674	+	262	161618474	-	BCAN_A0512	-	hypothetical protein
484	 61.26	0	504675..505580	-	301	161618475	-	BCAN_A0513	-	beta-lactamase domain-containing protein
485	 59.33	0	505781..506380	+	199	161618476	bioY	BCAN_A0514	-	protein bioY
486	 56.08	0	506534..507043	+	169	161618477	allA	BCAN_A0515	-	ureidoglycolate hydrolase
487	 57.98	0	507055..507411	+	118	161618478	pucM	BCAN_A0516	-	hydroxyisourate hydrolase
488	 57.83	0	507482..508318	+	278	161618479	-	BCAN_A0517	-	hypothetical protein
489	 56.52	0	508807..510492	+	561	161618480	capD	BCAN_A0518	-	capsular polysaccharide biosynthesis protein capD
490	 60.35	0	510565..510849	+	94	161618481	-	BCAN_A0519	-	hypothetical protein
491	 49.29	-1	511235..511516	-	93	161618482	-	BCAN_A0520	-	hypothetical protein
492	 58.24	0	512018..512836	+	272	161618483	-	BCAN_A0522	-	transposase for insertion sequence element IS6501
493	 58.67	0	512568..513155	+	195	161618484	-	BCAN_A0523	-	insertion sequence transposase protein
494	 54.33	0	513212..513511	+	99	161618485	-	BCAN_A0524	-	insertion sequence transposase protein
495	 54.11	0	513568..513798	+	76	161618486	-	BCAN_A0525	-	transposase IS4
496	 55.68	0	513923..514186	-	87	161618487	-	BCAN_A0526	-	hypothetical protein
497	 53.17	0	514049..514174	+	41	161618488	-	BCAN_A0527	-	hypothetical protein
498	 56.43	0	514168..514890	+	240	161618489	-	BCAN_A0528	-	hypothetical protein
499	 45.13	-2	515230..516009	-	259	161618490	arnA	BCAN_A0529	-	bifunctional polymyxin resistance arnA protein
500	 44.21	-2	516036..516890	-	284	161618491	-	BCAN_A0530	-	WbcT protein
501	 48.88	-1	516887..517645	-	252	161618492	rfbB	BCAN_A0531	-	O-antigen export system ATP-binding protein rfbB
502	 45.98	-2	517642..518424	-	260	161618493	rfbD	BCAN_A0532	-	O-antigen export system permease protein rfbD
503	 47.19	-2	518439..519542	-	367	161618494	rbmB	BCAN_A0533	-	L-glutamine:2-deoxy-scyllo-inosose aminotransferase
504	 47.93	-2	519550..520638	-	362	161618495	gmd	BCAN_A0534	-	GDP-mannose 4,6-dehydratase
505	 60.14	0	521157..521585	+	142	161618496	-	BCAN_A0535	-	hypothetical protein
506	 58.93	0	521504..521878	+	124	161618497	-	BCAN_A0536	-	transposase for insertion sequence element IS6501
507	 53.08	0	521908..522702	+	264	161618498	-	BCAN_A0537	-	integrase catalytic subunit
508	 58.81	0	522772..523140	+	122	161618499	-	BCAN_A0538	-	transposase for insertion sequence element IS6501
509	 53.76	0	523137..523415	+	92	161618500	-	BCAN_A0539	-	transposase for insertion sequence element IS6501
510	 54.17	0	523532..523771	+	79	161618501	-	BCAN_A0540	-	transposase
511	 43.88	-2	523902..525020	+	372	161618502	-	BCAN_A0541	-	mannosyltransferase
512	 47.66	-2	525541..525882	+	113	161618503	-	BCAN_A0542	-	transposase
513	 44.44	-2	525777..525902	-	41	161618504	-	BCAN_A0543	-	IS3 family transposase orfB
514	 54.76	0	525901..525942	+	13	161618505	-	BCAN_A0544	-	hypothetical protein
515	 54.42	0	525972..526559	-	195	161618506	-	BCAN_A0545	-	hypothetical protein
516	 60.14	0	526691..527119	+	142	161618507	-	BCAN_A0546	-	hypothetical protein
517	 57.31	0	527038..527454	+	138	161618508	-	BCAN_A0547	-	transposase
518	 54.00	0	527814..528113	+	99	161618509	-	BCAN_A0548	-	transposase IS629
519	 50.37	-1	528345..529682	+	445	161618510	manB	BCAN_A0549	-	phosphomannomutase
520	 51.23	-1	529707..531131	+	474	161618511	-	BCAN_A0550	-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase
521	 51.32	-1	531164..532336	+	390	161618512	-	BCAN_A0551	-	hypothetical protein
522	 51.26	-1	532419..533528	+	369	161618513	-	BCAN_A0552	-	glycosyltransferase
523	 46.67	-2	534009..534188	-	59	161618514	-	BCAN_A0553	-	hypothetical protein
524	 56.97	0	534220..535755	+	511	161618515	rbsA	BCAN_A0554	-	ribose import ATP-binding protein rbsA
525	 56.89	0	535776..536777	+	333	161618516	-	BCAN_A0555	-	monosaccharide-transporting ATPase
526	 57.52	0	536604..537587	-	327	161618517	-	BCAN_A0556	-	hypothetical protein
527	 57.11	0	536856..537818	+	320	161618518	-	BCAN_A0557	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.