IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
370	 56.04	0	394328..394807	+	159	161618361	atpF	BCAN_A0390	-	F0F1 ATP synthase subunit B
371	 62.44	+1	394930..395592	-	220	161618362	rnhB	BCAN_A0391	-	ribonuclease HII
372	 60.95	0	395769..396941	-	390	161618363	-	BCAN_A0392	-	radical SAM domain-containing protein
373	 56.78	0	397662..397934	-	90	161618364	-	BCAN_A0394	-	hypothetical protein
374	 55.80	0	398078..398353	-	91	161618365	-	BCAN_A0395	-	hypothetical protein
375	 33.33	-2	398425..398637	-	70	161618366	-	BCAN_A0396	-	hypothetical protein
376	 47.62	-2	398621..398767	-	48	161618367	-	BCAN_A0397	-	hypothetical protein
377	 60.11	0	398712..399611	-	299	161618368	ispE	BCAN_A0398	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
378	 61.26	0	399641..399862	-	73	161618369	-	BCAN_A0399	-	hypothetical protein
379	 59.98	0	400293..401399	-	368	161618370	-	BCAN_A0400	-	peptidase S49
380	 59.56	0	401320..402501	-	393	161618371	nhaA	BCAN_A0401	-	Na+/H+ antiporter NhaA
381	 46.85	-2	402521..402742	-	73	161618372	-	BCAN_A0402	-	hypothetical protein
382	 65.39	+1	402791..403573	-	260	161618373	-	BCAN_A0403	-	methyltransferase small
383	 53.07	0	403570..403797	-	75	161618374	-	BCAN_A0404	-	hypothetical protein
384	 61.68	+1	404060..405082	+	340	161618375	-	BCAN_A0405	-	hypothetical protein
385	 59.11	0	405386..407251	+	621	161618376	bimA	BCAN_A0406	-	protein bimA
386	 57.07	0	407403..408329	+	308	161618377	glyQ	BCAN_A0407	-	glycyl-tRNA synthetase subunit alpha
387	 53.66	0	408326..408448	+	40	161618378	-	BCAN_A0408	-	hypothetical protein
388	 60.07	0	408448..410781	+	777	161618379	glyS	BCAN_A0409	-	glycyl-tRNA synthetase subunit beta
389	 64.92	+1	410920..411891	+	323	161618380	-	BCAN_A0410	-	Sua5/YciO/YrdC/YwlC family protein
390	 59.02	0	411917..413329	+	470	161618381	-	BCAN_A0411	-	hypothetical protein
391	 52.52	-1	413367..413684	-	105	161618382	-	BCAN_A0412	-	plasmid stabilization system protein
392	 54.41	0	413681..413941	-	86	161618383	-	BCAN_A0413	-	CopG-like DNA-binding
393	 46.01	-2	414050..414262	-	70	161618384	-	BCAN_A0414	-	hypothetical protein
394	 62.08	+1	414252..414818	+	188	161618385	-	BCAN_A0415	-	hypothetical protein
395	 60.56	0	414961..415713	-	250	161618386	-	BCAN_A0416	-	enoyl-CoA hydratase
396	 61.10	0	415716..417494	-	592	161618387	-	BCAN_A0417	-	acyl-CoA dehydrogenase domain-containing protein
397	 57.68	0	417812..418957	+	381	161618388	-	BCAN_A0418	-	diguanylate cyclase
398	 61.14	0	418975..420258	-	427	161618389	purD	BCAN_A0419	-	phosphoribosylamine--glycine ligase
399	 61.18	0	420403..421404	+	333	161618390	ubiA	BCAN_A0420	-	prenyltransferase
400	 60.13	0	421444..422055	-	203	161618391	pdxH	BCAN_A0421	-	pyridoxamine 5'-phosphate oxidase
401	 56.48	0	422329..422799	+	156	161618392	-	BCAN_A0422	-	hypothetical protein
402	 60.19	0	422944..423885	+	313	161618393	dnaJ	BCAN_A0423	-	chaperone protein dnaJ
403	 56.78	0	424029..424847	+	272	161618394	fabI	BCAN_A0424	-	enoyl-(acyl carrier protein) reductase
404	 58.56	0	425903..426013	+	36	161618395	-	BCAN_A0427	-	cold shock protein
405	 49.33	-1	426111..426260	-	49	161618396	-	BCAN_A0428	-	hypothetical protein
406	 55.87	0	426483..426695	+	70	161618397	-	BCAN_A0429	-	hypothetical protein
407	 60.35	0	426772..427452	+	226	161618398	-	BCAN_A0430	-	hypothetical protein
408	 50.00	-1	427597..427848	-	83	161618399	-	BCAN_A0431	-	hypothetical protein
409	 61.00	0	428123..429217	+	364	161618400	aroC	BCAN_A0432	-	chorismate synthase
410	 60.30	0	429353..430468	+	371	161618401	ribB	BCAN_A0433	-	3,4-dihydroxy-2-butanone 4-phosphate synthase
411	 58.15	0	430684..431634	+	316	161618402	-	BCAN_A0434	-	histone deacetylase superfamily protein
412	 56.86	0	431639..431893	+	84	161618403	xseB	BCAN_A0435	-	exodeoxyribonuclease VII small subunit
413	 57.61	0	431900..432418	-	172	161618404	-	BCAN_A0436	-	SNARE associated Golgi protein
414	 52.87	-1	432660..432920	-	86	161618405	ymgE	BCAN_A0437	-	transglycosylase-associated protein
415	 64.13	+1	433083..433634	+	183	161618406	-	BCAN_A0438	-	hypothetical protein
416	 61.05	0	433838..434710	+	290	161618407	-	BCAN_A0439	-	pirin domain-containing protein
417	 62.11	+1	434853..436784	+	643	161618408	dxs	BCAN_A0440	-	1-deoxy-D-xylulose-5-phosphate synthase
418	 61.81	+1	436790..437551	+	253	161618409	-	BCAN_A0441	-	hemolysin A
419	 63.70	+1	437548..438795	+	415	161618410	rumA	BCAN_A0442	-	23S ribosomal RNA (uracil-5-)-methyltransferase rumA
420	 57.71	0	438939..439541	-	200	161618411	-	BCAN_A0443	-	hypothetical protein
421	 51.37	-1	439671..440036	+	121	161618412	-	BCAN_A0444	-	hypothetical protein
422	 61.81	+1	440223..441437	+	404	161618413	-	BCAN_A0445	-	peptidoglycan-binding LysM
423	 58.29	0	441640..443526	+	628	161618414	-	BCAN_A0446	-	heavy metal tolerance protein precursor
424	 59.66	0	443631..444329	+	232	161618415	-	BCAN_A0447	-	phosphatidylserine decarboxylase
425	 59.26	0	444334..445170	+	278	161618416	pssA	BCAN_A0448	-	CDP-diacylglycerol--serine O-phosphatidyltransferase
426	 61.00	0	445255..445995	-	246	161618417	-	BCAN_A0449	-	short-chain dehydrogenase/reductase SDR
427	 59.26	0	446064..447521	-	485	161618418	purF	BCAN_A0450	-	amidophosphoribosyltransferase
428	 48.99	-1	447543..447740	+	65	161618419	-	BCAN_A0451	-	hypothetical protein
429	 58.20	0	447836..448414	-	192	161618420	-	BCAN_A0452	-	colicin V production protein
430	 62.18	+1	448540..449943	-	467	161618421	radA	BCAN_A0453	-	DNA repair protein RadA
431	 58.63	0	449971..451476	-	501	161618422	dnaB	BCAN_A0454	-	replicative DNA helicase
432	 58.25	0	453327..453896	-	189	161618423	rplI	BCAN_A0457	-	50S ribosomal protein L9
433	 61.83	+1	453926..454897	-	323	161618424	-	BCAN_A0458	-	hypothetical protein
434	 58.63	0	455048..455296	-	82	161618425	rpsR	BCAN_A0459	-	30S ribosomal protein S18
435	 61.74	+1	455299..455745	-	148	161618426	rpsF	BCAN_A0460	-	30S ribosomal protein S6
436	 54.72	0	455770..456129	-	119	161618427	-	BCAN_A0461	-	hypothetical protein
437	 61.69	+1	456151..457095	+	314	161618428	fabD	BCAN_A0462	-	malonyl CoA-acyl carrier protein transacylase
438	 59.08	0	457165..457902	+	245	161618429	fabG	BCAN_A0463	-	3-ketoacyl-(acyl-carrier-protein) reductase NodG
439	 53.59	0	458176..458412	+	78	161618430	acpP	BCAN_A0464	-	acyl carrier protein
440	 57.95	0	458416..458679	+	87	161618431	-	BCAN_A0465	-	hypothetical protein
441	 61.84	+1	458736..459998	+	420	161618432	-	BCAN_A0466	-	3-oxoacyl-(acyl carrier protein) synthase II
442	 59.08	0	460223..461461	+	412	161618433	-	BCAN_A0467	-	hypothetical protein
443	 61.44	+1	461646..462545	+	299	161618434	-	BCAN_A0468	-	hypothetical protein
444	 57.62	0	462554..463216	+	220	161618435	gmk	BCAN_A0469	-	guanylate kinase
445	 61.08	0	463243..464655	-	470	161618436	tldD	BCAN_A0470	-	TldD protein
446	 63.96	+1	464797..465423	-	208	161618437	-	BCAN_A0471	-	invasion associated locus B family protein
447	 62.37	+1	465621..465713	-	30	161618438	-	BCAN_A0472	-	hypothetical protein
448	 58.60	0	465857..466711	+	284	161618439	coxB	BCAN_A0473	-	cytochrome c oxidase, subunit II
449	 59.86	0	466849..468507	+	552	161618440	ctaD	BCAN_A0474	-	cytochrome c oxidase, subunit I
450	 58.97	0	468735..469682	+	315	161618441	cyoE	BCAN_A0475	-	protoheme IX farnesyltransferase
451	 60.22	0	469682..469867	+	61	161618442	-	BCAN_A0476	-	hypothetical protein
452	 57.10	0	469887..470492	+	201	161618443	ctaG	BCAN_A0477	-	cytochrome C oxidase assembly protein
453	 57.79	0	470701..471579	+	292	161618444	-	BCAN_A0478	-	cytochrome c oxidase subunit 3
454	 57.29	0	471693..472076	+	127	161618445	-	BCAN_A0479	-	hypothetical protein
455	 57.82	0	472853..473971	+	372	161618446	ispH	BCAN_A0482	-	4-hydroxy-3-methylbut-2-enyl diphosphate reductase
456	 58.72	0	473977..474957	+	326	161618447	thrB	BCAN_A0483	-	homoserine kinase
457	 59.78	0	474954..475418	+	154	161618448	-	BCAN_A0484	-	ribonuclease H
458	 58.44	0	475448..475933	-	161	161618449	-	BCAN_A0485	-	redoxin domain-containing protein
459	 59.55	0	476113..476913	-	266	161618450	-	BCAN_A0486	-	hypothetical protein
460	 59.04	0	477048..477650	+	200	161618451	-	BCAN_A0487	-	hypothetical protein
461	 60.14	0	477748..480642	-	964	161618452	-	BCAN_A0488	-	diguanylate cyclase
462	 55.88	0	480639..481259	-	206	161618453	-	BCAN_A0489	-	GCN5-related N-acetyltransferase
463	 59.01	0	481430..482722	-	430	161618454	-	BCAN_A0490	-	hypothetical protein
464	 58.69	0	482776..484167	-	463	161618455	thrC	BCAN_A0491	-	threonine synthase
465	 47.62	-2	484247..484498	-	83	161618456	-	BCAN_A0492	-	hypothetical protein
466	 55.27	0	484649..485227	+	192	161618457	-	BCAN_A0493	-	lipoprotein
467	 56.27	0	485541..487175	+	544	161618458	-	BCAN_A0494	-	hypothetical protein
468	 36.46	-2	487225..487320	+	31	161618459	-	BCAN_A0495	-	hypothetical protein
469	 56.45	0	487304..487489	+	61	161618460	-	BCAN_A0496	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.