IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
287	 56.67	0	309120..310079	-	319	161618278	-	BCAN_A0303	-	hypothetical protein
288	 60.90	0	310212..311528	+	438	161618279	phoR	BCAN_A0304	-	phosphate regulon sensor protein phoR
289	 61.33	+1	311658..312200	-	180	161618280	-	BCAN_A0305	-	GcrA cell cycle regulator
290	 55.56	0	312372..312713	-	113	161618281	-	BCAN_A0306	-	hypothetical protein
291	 59.74	0	312803..314014	+	403	161618282	argD	BCAN_A0307	-	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
292	 57.83	0	314019..314957	+	312	161618283	argF	BCAN_A0308	-	ornithine carbamoyltransferase
293	 58.46	0	314959..315981	+	340	161618284	hslO	BCAN_A0309	-	Hsp33-like chaperonin
294	 57.00	0	316022..316414	-	130	161618285	apaG	BCAN_A0310	-	ApaG
295	 59.48	0	316783..317979	-	398	161618286	metZ	BCAN_A0311	-	O-succinylhomoserine sulfhydrylase
296	 54.17	0	317969..318064	-	31	161618287	-	BCAN_A0312	-	hypothetical protein
297	 61.08	0	318406..319497	+	363	161618288	-	BCAN_A0314	-	2'-deoxycytidine 5'-triphosphate deaminase
298	 60.18	0	319588..320604	+	338	161618289	-	BCAN_A0315	-	AraC family transcriptional regulator
299	 53.56	0	320691..320957	+	88	161618290	-	BCAN_A0316	-	hypothetical protein
300	 59.83	0	320994..321476	+	160	161618291	-	BCAN_A0317	-	SCP-like extracellular
301	 59.94	0	321651..323018	+	455	161618292	-	BCAN_A0318	-	MATE efflux family protein
302	 60.46	0	323020..324114	-	364	161618293	pyrD	BCAN_A0319	-	dihydroorotate dehydrogenase 2
303	 58.47	0	324111..324464	-	117	161618294	-	BCAN_A0320	-	hypothetical protein
304	 54.69	0	324565..325065	-	166	161618295	-	BCAN_A0321	-	hypothetical protein
305	 58.77	0	324718..325173	+	151	161618296	-	BCAN_A0322	-	hypothetical protein
306	 58.99	0	325264..326214	-	316	161618297	pip	BCAN_A0323	-	proline iminopeptidase
307	 58.57	0	326444..327085	+	213	161618298	-	BCAN_A0324	-	two component LuxR family transcriptional regulator
308	 60.65	0	327122..330646	-	1174	161618299	-	BCAN_A0325	-	integral membrane sensor hybrid histidine kinase
309	 52.38	-1	330931..331077	-	48	161618300	-	BCAN_A0326	-	hypothetical protein
310	 52.76	-1	331159..331575	+	138	161618301	mscL	BCAN_A0327	-	large conductance mechanosensitive channel protein
311	 58.37	0	331651..332928	-	425	161618302	hemA	BCAN_A0328	-	5-aminolevulinate synthase
312	 57.26	0	333074..333775	-	233	161618303	-	BCAN_A0329	-	polysaccharide deacetylase
313	 56.67	0	333784..334503	-	239	161618304	-	BCAN_A0330	-	glycosyl transferase family protein
314	 52.00	-1	334633..335307	-	224	161618305	-	BCAN_A0331	-	hypothetical protein
315	 49.57	-1	335399..335632	-	77	161618306	-	BCAN_A0332	-	hypothetical protein
316	 59.71	0	335675..336565	-	296	161618307	oxyR	BCAN_A0333	-	transcriptional regulator
317	 61.43	+1	336687..337106	+	139	161618308	-	BCAN_A0334	-	LrgA family protein
318	 62.85	+1	337093..337800	+	235	161618309	-	BCAN_A0335	-	LrgB family protein
319	 50.89	-1	337974..338309	+	111	161618310	-	BCAN_A0336	-	hypothetical protein
320	 58.78	0	338347..339588	+	413	161618311	-	BCAN_A0337	-	protein of unknown function DUF900 hydrolase family protein
321	 61.11	0	339675..340556	+	293	161618312	panC	BCAN_A0338	-	pantoate--beta-alanine ligase
322	 62.32	+1	340558..341385	+	275	161618313	panB	BCAN_A0339	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
323	 54.95	0	341582..342358	-	258	161618314	-	BCAN_A0340	-	oxidoreductase FAD-binding subunit
324	 51.98	-1	342488..342664	+	58	161618315	-	BCAN_A0341	-	hypothetical protein
325	 51.85	-1	342761..343111	+	116	161618316	-	BCAN_A0342	-	hypothetical protein
326	 53.01	0	343150..344247	+	365	161618317	nspC	BCAN_A0343	-	carboxynorspermidine decarboxylase
327	 55.23	0	344428..345669	+	413	161618318	-	BCAN_A0344	-	hypothetical protein
328	 59.26	0	345685..345900	-	71	161618319	-	BCAN_A0345	-	hypothetical protein
329	 61.03	0	345925..346953	-	342	161618320	-	BCAN_A0346	-	proline racemase
330	 62.57	+1	347406..348821	+	471	161618321	-	BCAN_A0347	-	MATE efflux family protein
331	 57.12	0	348867..349421	-	184	161618322	-	BCAN_A0348	-	invasion associated locus B family protein
332	 56.23	0	351014..351655	+	213	161618323	-	BCAN_A0350	-	two component LuxR family transcriptional regulator
333	 59.27	0	352501..354069	+	522	161618324	-	BCAN_A0352	-	TRAP transporter, DctM subunit
334	 58.62	0	354131..355249	+	372	161618325	-	BCAN_A0353	-	TRAP dicarboxylate transporter- DctP subunit
335	 59.83	0	355332..356150	-	272	161618326	-	BCAN_A0354	-	hypothetical protein
336	 61.20	0	356163..357590	-	475	161618327	-	BCAN_A0355	-	chitin deacetylase
337	 56.88	0	357858..358133	+	91	161618328	-	BCAN_A0356	-	hypothetical protein
338	 60.78	0	358139..359617	+	492	161618329	xdhA	BCAN_A0357	-	xanthine dehydrogenase, small subunit
339	 60.08	0	359630..361984	+	784	161618330	xdhB	BCAN_A0358	-	xanthine dehydrogenase, molybdopterin binding subunit
340	 58.99	0	361989..362861	+	290	161618331	xdhC	BCAN_A0359	-	xanthine dehydrogenase accessory protein XdhC
341	 58.14	0	362942..363856	-	304	161618332	-	BCAN_A0360	-	LysR family transcriptional regulator
342	 58.33	0	364037..365284	+	415	161618333	-	BCAN_A0361	-	hypothetical protein
343	 58.62	0	365281..366585	+	434	161618334	guaD	BCAN_A0362	-	guanine deaminase
344	 61.93	+1	366665..367951	+	428	161618335	ttuD	BCAN_A0363	-	hydroxypyruvate reductase
345	 53.46	0	367932..368090	-	52	161618336	ccoS	BCAN_A0364	-	cytochrome oxidase maturation protein, cbb3-type
346	 60.82	0	368087..370345	-	752	161618337	-	BCAN_A0365	-	heavy metal translocating P-type ATPase
347	 57.03	0	370342..370839	-	165	161618338	-	BCAN_A0366	-	FixH family protein
348	 58.28	0	370839..372389	-	516	161618339	ccoG	BCAN_A0367	-	cytochrome c oxidase accessory protein CcoG
349	 60.65	0	372549..373412	-	287	161618340	-	BCAN_A0368	-	cytochrome c oxidase, cbb3-type, subunit III
350	 49.69	-1	373405..373563	-	52	161618341	-	BCAN_A0369	-	Cbb3-type cytochrome oxidase component
351	 58.88	0	373578..374309	-	243	161618342	ccoO	BCAN_A0370	-	cytochrome c oxidase, cbb3-type, subunit II
352	 57.87	0	374324..375949	-	541	161618343	ccoN	BCAN_A0371	-	cytochrome c oxidase, cbb3-type, subunit I
353	 58.82	0	376167..376625	-	152	161618344	fur	BCAN_A0372	-	ferric uptake regulation protein
354	 51.99	-1	376624..376950	+	108	161618345	-	BCAN_A0373	-	hypothetical protein
355	 57.40	0	377067..377681	+	204	161618346	-	BCAN_A0374	-	DSBA oxidoreductase
356	 60.65	0	377730..379175	-	481	161618347	-	BCAN_A0375	-	succinate semialdehyde dehydrogenase
357	 59.58	0	379374..380459	+	361	161618348	-	BCAN_A0376	-	methylated-DNA-[protein]-cysteine S-methyltransferase
358	 53.56	0	380641..380991	+	116	161618349	-	BCAN_A0377	-	hypothetical protein
359	 60.06	0	381328..382371	+	347	161618350	-	BCAN_A0378	-	hypothetical protein
360	 56.01	0	383823..385070	+	415	161618351	-	BCAN_A0380	-	transport protein
361	 59.86	0	385109..386107	-	332	161618352	-	BCAN_A0381	-	polysaccharide deacetylase
362	 62.35	+1	386353..387024	+	223	161618353	-	BCAN_A0382	-	hypothetical protein
363	 61.78	+1	387046..388497	+	483	161618354	-	BCAN_A0383	-	GTP-binding protein EngA
364	 56.80	0	388656..389972	+	438	161618355	dnaK	BCAN_A0384	-	chaperone protein dnaK
365	 60.39	0	390409..391698	+	429	161618356	-	BCAN_A0385	-	cell wall hydrolase SleB
366	 55.89	0	391969..392367	+	132	161618357	-	BCAN_A0386	-	hypothetical protein
367	 55.87	0	392475..393224	+	249	161618358	atpB	BCAN_A0387	-	F0F1 ATP synthase subunit A
368	 61.84	+1	393292..393519	+	75	161618359	atpE	BCAN_A0388	-	F0F1 ATP synthase subunit C
369	 62.84	+1	393691..394317	+	208	161618360	-	BCAN_A0389	-	F0F1 ATP synthase subunit B'
370	 56.04	0	394328..394807	+	159	161618361	atpF	BCAN_A0390	-	F0F1 ATP synthase subunit B
371	 62.44	+1	394930..395592	-	220	161618362	rnhB	BCAN_A0391	-	ribonuclease HII
372	 60.95	0	395769..396941	-	390	161618363	-	BCAN_A0392	-	radical SAM domain-containing protein
373	 56.78	0	397662..397934	-	90	161618364	-	BCAN_A0394	-	hypothetical protein
374	 55.80	0	398078..398353	-	91	161618365	-	BCAN_A0395	-	hypothetical protein
375	 33.33	-2	398425..398637	-	70	161618366	-	BCAN_A0396	-	hypothetical protein
376	 47.62	-2	398621..398767	-	48	161618367	-	BCAN_A0397	-	hypothetical protein
377	 60.11	0	398712..399611	-	299	161618368	ispE	BCAN_A0398	-	4-diphosphocytidyl-2C-methyl-D-erythritol kinase
378	 61.26	0	399641..399862	-	73	161618369	-	BCAN_A0399	-	hypothetical protein
379	 59.98	0	400293..401399	-	368	161618370	-	BCAN_A0400	-	peptidase S49
380	 59.56	0	401320..402501	-	393	161618371	nhaA	BCAN_A0401	-	Na+/H+ antiporter NhaA
381	 46.85	-2	402521..402742	-	73	161618372	-	BCAN_A0402	-	hypothetical protein
382	 65.39	+1	402791..403573	-	260	161618373	-	BCAN_A0403	-	methyltransferase small
383	 53.07	0	403570..403797	-	75	161618374	-	BCAN_A0404	-	hypothetical protein
384	 61.68	+1	404060..405082	+	340	161618375	-	BCAN_A0405	-	hypothetical protein
385	 59.11	0	405386..407251	+	621	161618376	bimA	BCAN_A0406	-	protein bimA
386	 57.07	0	407403..408329	+	308	161618377	glyQ	BCAN_A0407	-	glycyl-tRNA synthetase subunit alpha
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.