IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
253	 55.94	0	272679..272939	-	86	161618244	-	BCAN_A0268	-	hypothetical protein
254	 52.56	-1	273023..273412	+	129	161618245	-	BCAN_A0269	-	hypothetical protein
255	 61.92	+1	274004..274846	+	280	161618246	ureD	BCAN_A0270	-	urease accessory protein ureD
256	 59.74	0	274999..275301	+	100	161618247	ureA	BCAN_A0271	-	urease subunit gamma
257	 57.84	0	275468..275773	+	101	161618248	ureB	BCAN_A0272	-	urease subunit beta
258	 60.30	0	275792..277504	+	570	161618249	ureC	BCAN_A0273	-	urease subunit alpha
259	 59.10	0	277520..278008	+	162	161618250	ureE	BCAN_A0274	-	urease accessory protein UreE
260	 63.17	+1	277980..278666	+	228	161618251	ureF	BCAN_A0275	-	urease accessory protein ureF
261	 57.26	0	278663..279289	+	208	161618252	ureG	BCAN_A0276	-	urease accessory protein UreG
262	 58.73	0	279646..281271	-	541	161618253	luxN	BCAN_A0278	-	autoinducer 1 sensor kinase/phosphatase luxN
263	 54.25	0	281288..281593	-	101	161618254	-	BCAN_A0279	-	hypothetical protein
264	 60.68	0	281556..282707	+	383	161618255	-	BCAN_A0280	-	RND family efflux transporter MFP subunit
265	 60.31	0	282722..285853	+	1043	161618256	-	BCAN_A0281	-	acriflavin resistance protein
266	 59.93	0	285976..287445	-	489	161618257	hydA	BCAN_A0282	-	dihydropyrimidinase
267	 59.86	0	287497..288744	-	415	161618258	-	BCAN_A0283	-	allantoate amidohydrolase
268	 55.12	0	288963..289646	+	227	161618259	-	BCAN_A0284	-	TetR family transcriptional regulator
269	 61.28	0	289643..290032	+	129	161618260	-	BCAN_A0285	-	NUDIX hydrolase
270	 60.87	0	290077..291387	-	436	161618261	-	BCAN_A0286	-	dihydropyrimidine dehydrogenase
271	 60.86	0	291391..292887	-	498	161618262	-	BCAN_A0287	-	putative oxidoreductase
272	 54.62	0	292764..293012	+	82	161618263	-	BCAN_A0288	-	hypothetical protein
273	 56.29	0	293075..293527	-	150	161618264	-	BCAN_A0289	-	carbon monoxide dehydrogenase subunit G
274	 60.67	0	293678..295327	+	549	161618265	pgi	BCAN_A0290	-	glucose-6-phosphate isomerase
275	 58.76	0	295563..296624	+	353	161618266	-	BCAN_A0291	-	succinylglutamate desuccinylase/aspartoacylase
276	 60.27	0	296621..297370	+	249	161618267	-	BCAN_A0292	-	HAD family hydrolase
277	 58.99	0	297343..298215	-	290	161618268	-	BCAN_A0293	-	hypothetical protein
278	 59.39	0	298241..299986	-	581	161618269	-	BCAN_A0294	-	acyl-CoA synthetase
279	 56.35	0	300337..300966	-	209	161618270	ttgR	BCAN_A0295	-	HTH-type transcriptional regulator ttgR
280	 60.66	0	301097..301279	-	60	161618271	-	BCAN_A0296	-	hypothetical protein
281	 59.80	0	301139..302332	+	397	161618272	-	BCAN_A0297	-	RND family efflux transporter MFP subunit
282	 60.11	0	302329..305484	+	1051	161618273	-	BCAN_A0298	-	hydrophobe/amphiphile efflux-1 (HAE1) family protein
283	 53.57	0	305595..305762	-	55	161618274	-	BCAN_A0299	-	hypothetical protein
284	 48.23	-2	305983..306123	-	46	161618275	-	BCAN_A0300	-	hypothetical protein
285	 58.13	0	306192..307034	-	280	161618276	-	BCAN_A0301	-	extracellular solute-binding protein
286	 58.16	0	307300..309192	+	630	161618277	bcsA	BCAN_A0302	-	cellulose synthase catalytic subunit (UDP-forming)
287	 56.67	0	309120..310079	-	319	161618278	-	BCAN_A0303	-	hypothetical protein
288	 60.90	0	310212..311528	+	438	161618279	phoR	BCAN_A0304	-	phosphate regulon sensor protein phoR
289	 61.33	+1	311658..312200	-	180	161618280	-	BCAN_A0305	-	GcrA cell cycle regulator
290	 55.56	0	312372..312713	-	113	161618281	-	BCAN_A0306	-	hypothetical protein
291	 59.74	0	312803..314014	+	403	161618282	argD	BCAN_A0307	-	bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein
292	 57.83	0	314019..314957	+	312	161618283	argF	BCAN_A0308	-	ornithine carbamoyltransferase
293	 58.46	0	314959..315981	+	340	161618284	hslO	BCAN_A0309	-	Hsp33-like chaperonin
294	 57.00	0	316022..316414	-	130	161618285	apaG	BCAN_A0310	-	ApaG
295	 59.48	0	316783..317979	-	398	161618286	metZ	BCAN_A0311	-	O-succinylhomoserine sulfhydrylase
296	 54.17	0	317969..318064	-	31	161618287	-	BCAN_A0312	-	hypothetical protein
297	 61.08	0	318406..319497	+	363	161618288	-	BCAN_A0314	-	2'-deoxycytidine 5'-triphosphate deaminase
298	 60.18	0	319588..320604	+	338	161618289	-	BCAN_A0315	-	AraC family transcriptional regulator
299	 53.56	0	320691..320957	+	88	161618290	-	BCAN_A0316	-	hypothetical protein
300	 59.83	0	320994..321476	+	160	161618291	-	BCAN_A0317	-	SCP-like extracellular
301	 59.94	0	321651..323018	+	455	161618292	-	BCAN_A0318	-	MATE efflux family protein
302	 60.46	0	323020..324114	-	364	161618293	pyrD	BCAN_A0319	-	dihydroorotate dehydrogenase 2
303	 58.47	0	324111..324464	-	117	161618294	-	BCAN_A0320	-	hypothetical protein
304	 54.69	0	324565..325065	-	166	161618295	-	BCAN_A0321	-	hypothetical protein
305	 58.77	0	324718..325173	+	151	161618296	-	BCAN_A0322	-	hypothetical protein
306	 58.99	0	325264..326214	-	316	161618297	pip	BCAN_A0323	-	proline iminopeptidase
307	 58.57	0	326444..327085	+	213	161618298	-	BCAN_A0324	-	two component LuxR family transcriptional regulator
308	 60.65	0	327122..330646	-	1174	161618299	-	BCAN_A0325	-	integral membrane sensor hybrid histidine kinase
309	 52.38	-1	330931..331077	-	48	161618300	-	BCAN_A0326	-	hypothetical protein
310	 52.76	-1	331159..331575	+	138	161618301	mscL	BCAN_A0327	-	large conductance mechanosensitive channel protein
311	 58.37	0	331651..332928	-	425	161618302	hemA	BCAN_A0328	-	5-aminolevulinate synthase
312	 57.26	0	333074..333775	-	233	161618303	-	BCAN_A0329	-	polysaccharide deacetylase
313	 56.67	0	333784..334503	-	239	161618304	-	BCAN_A0330	-	glycosyl transferase family protein
314	 52.00	-1	334633..335307	-	224	161618305	-	BCAN_A0331	-	hypothetical protein
315	 49.57	-1	335399..335632	-	77	161618306	-	BCAN_A0332	-	hypothetical protein
316	 59.71	0	335675..336565	-	296	161618307	oxyR	BCAN_A0333	-	transcriptional regulator
317	 61.43	+1	336687..337106	+	139	161618308	-	BCAN_A0334	-	LrgA family protein
318	 62.85	+1	337093..337800	+	235	161618309	-	BCAN_A0335	-	LrgB family protein
319	 50.89	-1	337974..338309	+	111	161618310	-	BCAN_A0336	-	hypothetical protein
320	 58.78	0	338347..339588	+	413	161618311	-	BCAN_A0337	-	protein of unknown function DUF900 hydrolase family protein
321	 61.11	0	339675..340556	+	293	161618312	panC	BCAN_A0338	-	pantoate--beta-alanine ligase
322	 62.32	+1	340558..341385	+	275	161618313	panB	BCAN_A0339	-	3-methyl-2-oxobutanoate hydroxymethyltransferase
323	 54.95	0	341582..342358	-	258	161618314	-	BCAN_A0340	-	oxidoreductase FAD-binding subunit
324	 51.98	-1	342488..342664	+	58	161618315	-	BCAN_A0341	-	hypothetical protein
325	 51.85	-1	342761..343111	+	116	161618316	-	BCAN_A0342	-	hypothetical protein
326	 53.01	0	343150..344247	+	365	161618317	nspC	BCAN_A0343	-	carboxynorspermidine decarboxylase
327	 55.23	0	344428..345669	+	413	161618318	-	BCAN_A0344	-	hypothetical protein
328	 59.26	0	345685..345900	-	71	161618319	-	BCAN_A0345	-	hypothetical protein
329	 61.03	0	345925..346953	-	342	161618320	-	BCAN_A0346	-	proline racemase
330	 62.57	+1	347406..348821	+	471	161618321	-	BCAN_A0347	-	MATE efflux family protein
331	 57.12	0	348867..349421	-	184	161618322	-	BCAN_A0348	-	invasion associated locus B family protein
332	 56.23	0	351014..351655	+	213	161618323	-	BCAN_A0350	-	two component LuxR family transcriptional regulator
333	 59.27	0	352501..354069	+	522	161618324	-	BCAN_A0352	-	TRAP transporter, DctM subunit
334	 58.62	0	354131..355249	+	372	161618325	-	BCAN_A0353	-	TRAP dicarboxylate transporter- DctP subunit
335	 59.83	0	355332..356150	-	272	161618326	-	BCAN_A0354	-	hypothetical protein
336	 61.20	0	356163..357590	-	475	161618327	-	BCAN_A0355	-	chitin deacetylase
337	 56.88	0	357858..358133	+	91	161618328	-	BCAN_A0356	-	hypothetical protein
338	 60.78	0	358139..359617	+	492	161618329	xdhA	BCAN_A0357	-	xanthine dehydrogenase, small subunit
339	 60.08	0	359630..361984	+	784	161618330	xdhB	BCAN_A0358	-	xanthine dehydrogenase, molybdopterin binding subunit
340	 58.99	0	361989..362861	+	290	161618331	xdhC	BCAN_A0359	-	xanthine dehydrogenase accessory protein XdhC
341	 58.14	0	362942..363856	-	304	161618332	-	BCAN_A0360	-	LysR family transcriptional regulator
342	 58.33	0	364037..365284	+	415	161618333	-	BCAN_A0361	-	hypothetical protein
343	 58.62	0	365281..366585	+	434	161618334	guaD	BCAN_A0362	-	guanine deaminase
344	 61.93	+1	366665..367951	+	428	161618335	ttuD	BCAN_A0363	-	hydroxypyruvate reductase
345	 53.46	0	367932..368090	-	52	161618336	ccoS	BCAN_A0364	-	cytochrome oxidase maturation protein, cbb3-type
346	 60.82	0	368087..370345	-	752	161618337	-	BCAN_A0365	-	heavy metal translocating P-type ATPase
347	 57.03	0	370342..370839	-	165	161618338	-	BCAN_A0366	-	FixH family protein
348	 58.28	0	370839..372389	-	516	161618339	ccoG	BCAN_A0367	-	cytochrome c oxidase accessory protein CcoG
349	 60.65	0	372549..373412	-	287	161618340	-	BCAN_A0368	-	cytochrome c oxidase, cbb3-type, subunit III
350	 49.69	-1	373405..373563	-	52	161618341	-	BCAN_A0369	-	Cbb3-type cytochrome oxidase component
351	 58.88	0	373578..374309	-	243	161618342	ccoO	BCAN_A0370	-	cytochrome c oxidase, cbb3-type, subunit II
352	 57.87	0	374324..375949	-	541	161618343	ccoN	BCAN_A0371	-	cytochrome c oxidase, cbb3-type, subunit I
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.