IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1970	 59.89	0	1967480..1969000	-	506	161619961	-	BCAN_A2092	-	aldehyde dehydrogenase
1971	 61.00	0	1968994..1969770	-	258	161619962	-	BCAN_A2093	-	enoyl-CoA hydratase/isomerase
1972	 59.88	0	1971375..1972376	-	333	161619963	-	BCAN_A2095	-	hypothetical protein
1973	 59.30	0	1972355..1973413	-	352	161619964	ascG	BCAN_A2096	-	HTH-type transcriptional regulator ascG
1974	 58.80	0	1973664..1974833	+	389	161619965	-	BCAN_A2097	-	hypothetical protein
1975	 59.53	0	1974867..1975889	-	340	161619966	luxA	BCAN_A2098	-	alkanal monooxygenase subunit alpha
1976	 55.71	0	1975886..1976095	-	69	161619967	-	BCAN_A2099	-	hypothetical protein
1977	 60.35	0	1976158..1977123	+	321	161619968	-	BCAN_A2100	-	hypothetical protein
1978	 58.53	0	1977767..1978651	+	294	161619969	-	BCAN_A2101	-	hypothetical protein
1979	 59.62	0	1978648..1979442	+	264	161619970	-	BCAN_A2102	-	ABC transporter related
1980	 59.87	0	1979604..1980647	+	347	161619971	holA	BCAN_A2103	-	DNA polymerase III subunit delta
1981	 56.58	0	1980741..1981622	-	293	161619972	-	BCAN_A2104	-	parB-like partition protein
1982	 54.26	0	1981666..1982463	-	265	161619973	-	BCAN_A2105	-	hypothetical protein
1983	 54.67	0	1982516..1983157	-	213	161619974	gidB	BCAN_A2106	-	glucose-inhibited division protein B
1984	 56.72	0	1983154..1985064	-	636	161619975	gidA	BCAN_A2107	-	tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
1985	 52.60	-1	1985291..1986619	-	442	161619976	trmE	BCAN_A2108	-	tRNA modification GTPase TrmE
1986	 54.82	0	1986734..1988734	+	666	161619977	-	BCAN_A2109	-	spermatogenesis-associated protein 20 precursor
1987	 55.29	0	1988819..1990084	-	421	161619978	rho	BCAN_A2110	-	transcription termination factor Rho
1988	 54.00	0	1990466..1991002	-	178	161619979	-	BCAN_A2111	-	hypothetical protein
1989	 55.56	0	1990999..1992024	-	341	161619980	hemE	BCAN_A2112	-	uroporphyrinogen decarboxylase
1990	 55.83	0	1992477..1993316	+	279	161619981	-	BCAN_A2113	-	hypothetical protein
1991	 54.67	0	1993313..1993912	+	199	161619982	maf	BCAN_A2114	-	Maf-like protein
1992	 58.39	0	1993905..1994774	+	289	161619983	aroE	BCAN_A2115	-	shikimate 5-dehydrogenase
1993	 57.38	0	1994771..1995373	+	200	161619984	coaE	BCAN_A2116	-	dephospho-CoA kinase
1994	 58.30	0	1995415..1996119	+	234	161619985	dnaQ	BCAN_A2117	-	DNA polymerase III subunit epsilon
1995	 57.11	0	1996178..1996669	-	163	161619986	secB	BCAN_A2118	-	preprotein translocase subunit SecB
1996	 59.64	0	1996789..1997286	-	165	161619987	fxsA	BCAN_A2119	-	FxsA
1997	 55.46	0	1997503..1998198	+	231	161619988	-	BCAN_A2120	-	import inner membrane translocase subunit Tim44
1998	 60.09	0	1998262..1999371	+	369	161619989	-	BCAN_A2121	-	MltA domain-containing protein
1999	 63.18	+1	1999377..1999979	+	200	161619990	-	BCAN_A2122	-	Smr protein/MutS2
2000	 58.27	0	1999976..2000356	+	126	161619991	-	BCAN_A2123	-	XRE family transcriptional regulator
2001	 56.27	0	2000365..2001384	-	339	161619992	-	BCAN_A2124	-	hypothetical protein
2002	 59.64	0	2002909..2003463	-	184	161619993	hslV	BCAN_A2126	-	ATP-dependent protease peptidase subunit
2003	 59.61	0	2003760..2004368	+	202	161619994	hisB	BCAN_A2127	-	imidazoleglycerol-phosphate dehydratase
2004	 59.80	0	2004480..2004989	+	169	161619995	-	BCAN_A2128	-	hypothetical protein
2005	 58.06	0	2004992..2005642	+	216	161619996	hisH	BCAN_A2129	-	imidazole glycerol phosphate synthase subunit HisH
2006	 59.84	0	2005647..2006378	+	243	161619997	hisA	BCAN_A2130	-	1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
2007	 60.31	0	2006375..2007160	+	261	161619998	hisF	BCAN_A2131	-	imidazole glycerol phosphate synthase subunit HisF
2008	 62.04	+1	2007296..2007619	+	107	161619999	hisE	BCAN_A2132	-	phosphoribosyl-ATP pyrophosphatase
2009	 57.59	0	2007634..2008602	+	322	161620000	coaA	BCAN_A2133	-	pantothenate kinase
2010	 59.36	0	2008665..2009102	-	145	161620001	-	BCAN_A2134	-	hypothetical protein
2011	 59.40	0	2009213..2010823	-	536	161620002	pckA	BCAN_A2135	-	phosphoenolpyruvate carboxykinase
2012	 50.57	-1	2011109..2011282	-	57	161620003	-	BCAN_A2136	-	hypothetical protein
2013	 58.19	0	2011227..2011946	+	239	161620004	chvI	BCAN_A2137	-	transcriptional regulatory protein chvI
2014	 59.36	0	2012057..2013862	+	601	161620005	chvG	BCAN_A2138	-	sensor protein chvG
2015	 60.21	0	2013888..2014367	+	159	161620006	hprK	BCAN_A2139	-	HPr kinase/phosphorylase
2016	 55.22	0	2014619..2015020	+	133	161620007	-	BCAN_A2140	-	PTS system fructose subfamily IIA component
2017	 59.68	0	2015024..2015338	+	104	161620008	-	BCAN_A2141	-	HPr family phosphocarrier protein
2018	 50.63	-1	2015402..2015719	+	105	161620009	-	BCAN_A2142	-	hypothetical protein
2019	 58.24	0	2015716..2017116	+	466	161620010	ahcY	BCAN_A2143	-	S-adenosyl-L-homocysteine hydrolase
2020	 60.66	0	2017501..2020080	+	859	161620011	-	BCAN_A2144	-	histidine kinase
2021	 59.27	0	2020089..2021630	+	513	161620012	-	BCAN_A2145	-	hypothetical protein
2022	 59.44	0	2021617..2022336	+	239	161620013	-	BCAN_A2146	-	nucleotidyl transferase
2023	 62.93	+1	2022351..2025509	+	1052	161620014	addB	BCAN_A2147	-	double-strand break repair protein AddB
2024	 61.45	+1	2025506..2029048	+	1180	161620015	addA	BCAN_A2148	-	double-strand break repair helicase AddA
2025	 58.33	0	2029230..2029553	+	107	161620016	trx	BCAN_A2149	-	thioredoxin
2026	 59.89	0	2029767..2031095	-	442	161620017	folC	BCAN_A2150	-	FolC bifunctional protein
2027	 57.28	0	2031098..2032003	-	301	161620018	-	BCAN_A2151	-	acetyl-CoA carboxylase subunit beta
2028	 58.93	0	2032064..2032903	-	279	161620019	trpA	BCAN_A2152	-	tryptophan synthase subunit alpha
2029	 62.61	+1	2032900..2033367	-	155	161620020	-	BCAN_A2153	-	hypothetical protein
2030	 60.03	0	2033370..2034590	-	406	161620021	trpB	BCAN_A2154	-	tryptophan synthase subunit beta
2031	 58.59	0	2034610..2035278	-	222	161620022	trpF	BCAN_A2155	-	N-(5'-phosphoribosyl)anthranilate isomerase
2032	 57.70	0	2035317..2035952	-	211	161620023	-	BCAN_A2156	-	hypothetical protein
2033	 60.37	0	2035949..2036710	-	253	161620024	-	BCAN_A2157	-	hypothetical protein
2034	 60.18	0	2036819..2037265	-	148	161620025	-	BCAN_A2158	-	hypothetical protein
2035	 61.72	+1	2037447..2038598	-	383	161620026	-	BCAN_A2159	-	benzoate transporter
2036	 60.23	0	2038612..2039403	-	263	161620027	-	BCAN_A2160	-	hypothetical protein
2037	 54.57	0	2039835..2040239	+	134	161620028	infC	BCAN_A2161	-	translation initiation factor IF-3
2038	 54.80	0	2040368..2040982	+	204	161620029	nccN	BCAN_A2162	-	nickel-cobalt-cadmium resistance protein nccN
2039	 57.71	0	2041249..2041449	+	66	161620030	rpmI	BCAN_A2163	-	50S ribosomal protein L35
2040	 57.78	0	2041477..2041881	+	134	161620031	rplT	BCAN_A2164	-	50S ribosomal protein L20
2041	 58.36	0	2041980..2042822	+	280	161620032	-	BCAN_A2165	-	hypothetical protein
2042	 58.92	0	2042911..2044020	+	369	161620033	pheS	BCAN_A2166	-	phenylalanyl-tRNA synthetase subunit alpha
2043	 60.46	0	2044042..2046456	+	804	161620034	pheT	BCAN_A2167	-	phenylalanyl-tRNA synthetase subunit beta
2044	 57.84	0	2046397..2049795	-	1132	161620035	-	BCAN_A2168	-	NAD-specific glutamate dehydrogenase
2045	 58.16	0	2046526..2047512	+	328	161620036	-	BCAN_A2169	-	hypothetical protein
2046	 58.41	0	2047738..2049651	+	637	161620037	dnaK	BCAN_A2170	-	molecular chaperone DnaK
2047	 59.79	0	2049896..2051029	+	377	161620038	dnaJ	BCAN_A2171	-	chaperone protein DnaJ
2048	 56.33	0	2051150..2051749	+	199	161620039	-	BCAN_A2172	-	phosphatidylethanolamine N-methyltransferase / phosphatidyl-N-methylethanolamine N-methyltransferase
2049	 60.39	0	2051959..2052675	+	238	161620040	pyrF	BCAN_A2173	-	orotidine 5'-phosphate decarboxylase
2050	 58.33	0	2052724..2053011	+	95	161620041	-	BCAN_A2174	-	hypothetical protein
2051	 58.00	0	2053049..2054236	-	395	161620042	-	BCAN_A2175	-	regucalcin
2052	 58.79	0	2054172..2055110	+	312	161620043	gshB	BCAN_A2176	-	glutathione synthetase
2053	 62.32	+1	2055187..2056752	+	521	161620044	-	BCAN_A2177	-	Mg chelatase-like protein
2054	 61.06	0	2057868..2058224	-	118	161620045	rlpA	BCAN_A2179	-	rare lipoprotein A
2055	 42.92	-2	2058383..2058601	+	72	161620046	-	BCAN_A2180	-	hypothetical protein
2056	 61.54	+1	2058834..2059184	+	116	161620047	-	BCAN_A2181	-	hypothetical protein
2057	 56.64	0	2059339..2060385	+	348	161620048	-	BCAN_A2182	-	hypothetical protein
2058	 60.23	0	2060527..2062017	+	496	161620049	pstC	BCAN_A2183	-	phosphate ABC transporter, permease protein PstC
2059	 59.73	0	2062017..2063327	+	436	161620050	pstA	BCAN_A2184	-	phosphate ABC transporter, permease protein PstA
2060	 59.12	0	2063344..2064165	+	273	161620051	pstB	BCAN_A2185	-	phosphate ABC transporter, ATP-binding protein
2061	 57.54	0	2064231..2064953	+	240	161620052	phoU	BCAN_A2186	-	phosphate transporter PhoU
2062	 61.86	+1	2065071..2065757	+	228	161620053	phoB	BCAN_A2187	-	phosphate regulon transcriptional regulatory protein PhoB
2063	 48.43	-2	2066113..2066271	-	52	161620054	-	BCAN_A2188	-	hypothetical protein
2064	 61.98	+1	2066343..2067323	+	326	161620055	-	BCAN_A2189	-	cell wall hydrolase SleB
2065	 54.32	0	2067433..2067756	-	107	161620056	-	BCAN_A2190	-	lipoprotein
2066	 60.61	0	2067833..2069086	+	417	161620057	-	BCAN_A2191	-	aminopeptidase T
2067	 55.62	0	2069247..2069744	-	165	161620058	dps	BCAN_A2192	-	DNA starvation/stationary phase protection protein Dps
2068	 60.43	0	2070027..2070716	+	229	161620059	-	BCAN_A2193	-	peptidase M22 glycoprotease
2069	 61.08	0	2070721..2071221	+	166	161620060	rimI	BCAN_A2194	-	ribosomal-protein-alanine acetyltransferase
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.