IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1867	 59.60	0	1868757..1869548	-	263	161619858	-	BCAN_A1984	-	GCN5-related N-acetyltransferase
1868	 60.95	0	1869606..1870847	-	413	161619859	argJ	BCAN_A1985	-	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein
1869	 52.78	-1	1871081..1871224	-	47	161619860	-	BCAN_A1986	-	hypothetical protein
1870	 57.93	0	1871285..1872280	-	331	161619861	surA	BCAN_A1987	-	chaperone surA precursor
1871	 47.62	-2	1872408..1872575	-	55	161619862	-	BCAN_A1988	-	hypothetical protein
1872	 58.62	0	1872619..1875339	+	906	161619863	secA	BCAN_A1989	-	preprotein translocase subunit SecA
1873	 45.39	-2	1875367..1875507	+	46	161619864	-	BCAN_A1990	-	hypothetical protein
1874	 59.05	0	1876116..1877402	+	428	161619865	-	BCAN_A1991	-	hypothetical protein
1875	 55.54	0	1877571..1879205	+	544	161619866	-	BCAN_A1992	-	sulfatase
1876	 46.08	-2	1879559..1879660	+	33	161619867	-	BCAN_A1993	-	hypothetical protein
1877	 59.04	0	1880373..1881356	-	327	161619868	oxyR	BCAN_A1995	-	transcriptional regulator
1878	 42.47	-2	1881396..1881581	-	61	161619869	-	BCAN_A1996	-	hypothetical protein
1879	 50.48	-1	1881499..1881603	+	34	161619870	-	BCAN_A1997	-	hypothetical protein
1880	 58.16	0	1881647..1882492	+	281	161619871	patH	BCAN_A1998	-	amino-acid ABC transporter-binding protein patH precurso
1881	 58.63	0	1882432..1883277	+	281	161619872	-	BCAN_A1999	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
1882	 58.09	0	1883282..1884004	+	240	161619873	-	BCAN_A2000	-	His/Glu/Gln/Arg/opine amino acid ABC transporter permease
1883	 59.80	0	1884001..1884816	+	271	161619874	occP	BCAN_A2001	-	octopine permease ATP-binding protein P
1884	 60.45	0	1884837..1885850	+	337	161619875	pah	BCAN_A2002	-	proclavaminate amidinohydrolase
1885	 58.61	0	1885859..1887310	+	483	161619876	aspA	BCAN_A2003	-	aspartate ammonia-lyase
1886	 57.54	0	1887294..1888049	+	251	161619877	bztD	BCAN_A2004	-	glutamate/glutamine/aspartate/asparagine transport ATP-binding protein bztD
1887	 58.86	0	1888058..1889056	+	332	161619878	ansA	BCAN_A2005	-	L-asparaginase
1888	 51.90	-1	1889193..1889876	-	227	161619879	-	BCAN_A2006	-	GntR family transcriptional regulator
1889	 56.36	0	1889900..1890889	-	329	161619880	ansA	BCAN_A2007	-	L-asparaginase
1890	 54.13	0	1890967..1892274	+	435	161619881	-	BCAN_A2008	-	major facilitator transporter
1891	 56.21	0	1892761..1892913	-	50	161619882	-	BCAN_A2009	-	hypothetical protein
1892	 59.03	0	1892960..1894243	-	427	161619883	mdeA	BCAN_A2010	-	methionine gamma-lyase
1893	 57.78	0	1894423..1894872	-	149	161619884	-	BCAN_A2011	-	UspA domain-containing protein
1894	 57.86	0	1895092..1896102	+	336	161619885	cysK	BCAN_A2012	-	cysteine synthase A
1895	 50.60	-1	1896184..1896432	-	82	161619886	-	BCAN_A2013	-	hypothetical protein
1896	 57.19	0	1896592..1897467	-	291	161619887	mmgB	BCAN_A2014	-	3-hydroxybutyryl-CoA dehydrogenase
1897	 60.65	0	1897951..1898880	-	309	161619888	-	BCAN_A2015	-	electron transfer flavoprotein, alpha subunit
1898	 58.37	0	1899033..1899779	-	248	161619889	etfB	BCAN_A2016	-	electron transfer flavoprotein subunit beta
1899	 59.51	0	1900115..1900813	+	232	161619890	-	BCAN_A2017	-	exsB protein
1900	 56.28	0	1900813..1901178	+	121	161619891	-	BCAN_A2018	-	hypothetical protein
1901	 58.07	0	1901178..1901933	+	251	161619892	-	BCAN_A2019	-	radical SAM domain-containing protein
1902	 61.05	0	1902070..1902657	-	195	161619893	-	BCAN_A2020	-	ATP:cob(I)alamin adenosyltransferase
1903	 54.41	0	1902659..1902862	-	67	161619894	-	BCAN_A2021	-	hypothetical protein
1904	 60.14	0	1902892..1903734	-	280	161619895	vdlC	BCAN_A2022	-	short chain dehydrogenase
1905	 56.68	0	1903892..1904752	+	286	161619896	yihY	BCAN_A2023	-	YihY family protein
1906	 60.91	0	1904770..1905255	+	161	161619897	-	BCAN_A2024	-	hypothetical protein
1907	 58.58	0	1905263..1905979	-	238	161619898	-	BCAN_A2025	-	redoxin domain-containing protein
1908	 59.60	0	1906033..1907433	+	466	161619899	argH	BCAN_A2026	-	argininosuccinate lyase
1909	 58.20	0	1907538..1907726	+	62	161619900	-	BCAN_A2027	-	hypothetical protein
1910	 61.06	0	1907754..1909019	+	421	161619901	lysA	BCAN_A2028	-	diaminopimelate decarboxylase
1911	 61.07	0	1909118..1911763	+	881	161619902	-	BCAN_A2029	-	hypothetical protein
1912	 55.49	0	1911803..1912339	-	178	161619903	hpt	BCAN_A2030	-	hypoxanthine phosphoribosyltransferase
1913	 62.82	+1	1912488..1913267	+	259	161619904	-	BCAN_A2031	-	ATP synthase subunits region ORF 4
1914	 59.08	0	1913412..1914518	+	368	161619905	hisC	BCAN_A2032	-	histidinol-phosphate aminotransferase
1915	 60.77	0	1914523..1915488	+	321	161619906	-	BCAN_A2033	-	cyclohexadienyl dehydrogenase
1916	 57.65	0	1915457..1916476	-	339	161619907	-	BCAN_A2034	-	hypothetical protein
1917	 48.53	-2	1916496..1916699	-	67	161619908	-	BCAN_A2035	-	hypothetical protein
1918	 58.11	0	1916688..1917248	+	186	161619909	-	BCAN_A2036	-	cation transport regulator-like protein 1
1919	 53.26	0	1917581..1917871	+	96	161619910	-	BCAN_A2038	-	protein of unknown function YGGT
1920	 55.18	0	1918042..1918572	-	176	161619911	ppa	BCAN_A2039	-	inorganic pyrophosphatase
1921	 58.88	0	1918725..1919507	-	260	161619912	-	BCAN_A2040	-	1-acyl-sn-glycerol-3-phosphate acyltransferase
1922	 56.55	0	1919686..1920219	-	177	161619913	-	BCAN_A2041	-	hypothetical protein
1923	 60.88	0	1920585..1921586	-	333	161619914	-	BCAN_A2042	-	hypothetical protein
1924	 60.15	0	1921579..1922238	-	219	161619915	ftsE	BCAN_A2043	-	cell division ATP-binding protein FtsE
1925	 53.11	0	1922243..1922419	-	58	161619916	-	BCAN_A2044	-	hypothetical protein
1926	 54.58	0	1922547..1922819	-	90	161619917	-	BCAN_A2045	-	hypothetical protein
1927	 56.29	0	1922596..1922913	+	105	161619918	-	BCAN_A2046	-	hypothetical protein
1928	 58.37	0	1923297..1923983	+	228	161619919	aqpZ	BCAN_A2047	-	aquaporin Z
1929	 55.03	0	1924364..1925059	+	231	161619920	-	BCAN_A2048	-	outer membrane lipoprotein carrier protein LolA
1930	 58.24	0	1925162..1925968	+	268	161619921	-	BCAN_A2049	-	exodeoxyribonuclease III (xth)
1931	 61.69	+1	1925974..1926435	-	153	161619922	-	BCAN_A2050	-	cAMP-dependent protein kinase regulatory subunit
1932	 55.99	0	1926470..1927153	-	227	161619923	pmrA	BCAN_A2051	-	transcriptional regulatory protein basR/pmrA
1933	 61.17	0	1927361..1927906	+	181	161619924	-	BCAN_A2052	-	hypothetical protein
1934	 44.33	-2	1927967..1928266	+	99	161619925	-	BCAN_A2053	-	hypothetical protein
1935	 45.73	-2	1928295..1929818	-	507	161619926	-	BCAN_A2054	-	Sulfated surface glycoprotein 185 precursor
1936	 43.15	-2	1929815..1930894	-	359	161619927	-	BCAN_A2055	-	hypothetical protein
1937	 46.15	-2	1931221..1931610	+	129	161619928	-	BCAN_A2056	-	hypothetical protein
1938	 42.96	-2	1931934..1932899	-	321	161619929	-	BCAN_A2057	-	hypothetical protein
1939	 58.93	0	1938357..1939028	-	223	161619930	-	BCAN_A2060	-	hypothetical protein
1940	 59.52	0	1939108..1939401	-	97	161619931	rpmB	BCAN_A2061	-	50S ribosomal protein L28
1941	 55.02	0	1939763..1940578	+	271	161619932	-	BCAN_A2062	-	hypothetical protein
1942	 58.87	0	1940690..1941112	-	140	161619933	-	BCAN_A2063	-	heavy metal-dependent transcription regulator 1
1943	 60.74	0	1941201..1943645	+	814	161619934	-	BCAN_A2064	-	heavy metal translocating P-type ATPase
1944	 45.47	-2	1944052..1944801	+	249	161619935	-	BCAN_A2065	-	hypothetical protein
1945	 41.16	-2	1944828..1945913	+	361	161619936	-	BCAN_A2066	-	hypothetical protein
1946	 61.67	+1	1946086..1947987	-	633	161619937	cobT	BCAN_A2067	-	cobaltochelatase, CobT subunit
1947	 57.75	0	1948095..1949081	-	328	161619938	cobS	BCAN_A2068	-	cobalamin 5'-phosphate synthase
1948	 63.64	+1	1949160..1949390	+	76	161619939	-	BCAN_A2069	-	hypothetical protein
1949	 56.98	0	1949368..1949997	-	209	161619940	-	BCAN_A2070	-	hypothetical protein
1950	 49.49	-1	1949994..1950191	-	65	161619941	-	BCAN_A2071	-	hypothetical protein
1951	 57.78	0	1950184..1950498	+	104	161619942	-	BCAN_A2072	-	hypothetical protein
1952	 59.40	0	1950523..1951830	-	435	161619943	-	BCAN_A2073	-	hypothetical protein
1953	 60.33	0	1951894..1953030	-	378	161619944	aroB	BCAN_A2074	-	3-dehydroquinate synthase
1954	 58.21	0	1953123..1953725	-	200	161619945	aroK	BCAN_A2075	-	shikimate kinase
1955	 55.91	0	1953871..1954056	+	61	161619946	-	BCAN_A2076	-	hypothetical protein
1956	 59.74	0	1954059..1954982	+	307	161619947	xerD	BCAN_A2077	-	site-specific tyrosine recombinase XerD
1957	 59.54	0	1955121..1956074	+	317	161619948	accA	BCAN_A2078	-	acetyl-CoA carboxylase carboxyltransferase subunit alpha
1958	 58.50	0	1956296..1957507	+	403	161619949	-	BCAN_A2079	-	hypothetical protein
1959	 54.65	0	1957486..1957743	+	85	161619950	-	BCAN_A2080	-	SirA family protein
1960	 59.68	0	1957761..1958933	-	390	161619951	-	BCAN_A2081	-	cobalamin synthesis protein P47K
1961	 60.74	0	1958935..1960047	-	370	161619952	-	BCAN_A2082	-	Serine-type D-Ala-D-Ala carboxypeptidase
1962	 59.54	0	1960345..1961508	+	387	161619953	-	BCAN_A2083	-	amidohydrolase
1963	 51.85	-1	1961505..1961639	+	44	161619954	-	BCAN_A2084	-	hypothetical protein
1964	 59.08	0	1961707..1962471	-	254	161619955	gdhII	BCAN_A2086	-	glucose 1-dehydrogenase 2
1965	 50.80	-1	1962579..1963013	+	144	161619956	-	BCAN_A2087	-	hypothetical protein
1966	 44.44	-2	1963112..1963507	+	131	161619957	-	BCAN_A2088	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.