IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1708	 54.44	0	1702323..1702502	-	59	161619699	rpmF	BCAN_A1813	-	50S ribosomal protein L32
1709	 56.27	0	1702663..1703460	-	265	161619700	mtgA	BCAN_A1814	-	monofunctional biosynthetic peptidoglycan transglycosylase
1710	 62.84	+1	1703584..1704498	+	304	161619701	-	BCAN_A1815	-	polyprenyl synthetase
1711	 60.17	0	1704506..1705768	-	420	161619702	ispG	BCAN_A1816	-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase
1712	 57.07	0	1705936..1706727	+	263	161619703	-	BCAN_A1817	-	3-hydroxybutyrate dehydrogenase
1713	 58.96	0	1706745..1707938	-	397	161619704	mosC	BCAN_A1818	-	membrane protein mosC
1714	 58.79	0	1708000..1711476	-	1158	161619705	-	BCAN_A1819	-	pyruvate carboxylase
1715	 56.72	0	1711742..1712857	-	371	161619706	livJ	BCAN_A1820	-	Leu/Ile/Val-binding protein precursor
1716	 56.06	0	1713000..1713131	-	43	161619707	-	BCAN_A1821	-	hypothetical protein
1717	 49.28	-1	1713150..1713287	+	45	161619708	-	BCAN_A1822	-	hypothetical protein
1718	 54.75	0	1713478..1714593	-	371	161619709	livJ	BCAN_A1823	-	Leu/Ile/Val-binding protein precursor
1719	 53.91	0	1714745..1715089	-	114	161619710	-	BCAN_A1824	-	hypothetical protein
1720	 58.17	0	1715843..1717183	-	446	161619711	-	BCAN_A1827	-	ABC transporter related
1721	 57.97	0	1717183..1718562	-	459	161619712	-	BCAN_A1828	-	inner-membrane translocator
1722	 57.47	0	1718565..1719488	-	307	161619713	-	BCAN_A1829	-	hypothetical protein
1723	 59.18	0	1719767..1720768	-	333	161619714	-	BCAN_A1830	-	proline racemase
1724	 60.56	0	1720774..1722051	-	425	161619715	-	BCAN_A1831	-	D-amino-acid dehydrogenase
1725	 48.92	-1	1722060..1722245	+	61	161619716	-	BCAN_A1832	-	hypothetical protein
1726	 57.31	0	1723068..1723505	-	145	161619717	slyA	BCAN_A1835	-	transcriptional regulator slyA
1727	 57.84	0	1723848..1724255	-	135	161619718	atpC	BCAN_A1836	-	F0F1 ATP synthase subunit epsilon
1728	 61.62	+1	1724380..1725945	-	521	161619719	atpD	BCAN_A1837	-	F0F1 ATP synthase subunit beta
1729	 57.00	0	1726073..1726951	-	292	161619720	-	BCAN_A1838	-	F0F1 ATP synthase subunit gamma
1730	 59.74	0	1726973..1728502	-	509	161619721	atpA	BCAN_A1839	-	F0F1 ATP synthase subunit alpha
1731	 58.29	0	1728502..1729062	-	186	161619722	atpH	BCAN_A1840	-	F0F1 ATP synthase subunit delta
1732	 58.94	0	1729344..1729757	-	137	161619723	-	BCAN_A1841	-	hypothetical protein
1733	 62.42	+1	1729824..1732058	-	744	161619724	priA	BCAN_A1842	-	primosome assembly protein PriA
1734	 56.73	0	1732168..1732821	+	217	161619725	talC	BCAN_A1843	-	putative translaldolase
1735	 58.93	0	1732965..1733546	-	193	161619726	-	BCAN_A1844	-	hypothetical protein
1736	 59.26	0	1733533..1736166	-	877	161619727	leuS	BCAN_A1845	-	leucyl-tRNA synthetase
1737	 60.79	0	1736289..1736969	+	226	161619728	-	BCAN_A1846	-	hypothetical protein
1738	 57.06	0	1736982..1737512	-	176	161619729	-	BCAN_A1847	-	hypothetical protein
1739	 54.17	0	1737583..1737870	-	95	161619730	-	BCAN_A1848	-	Usg family protein
1740	 59.25	0	1738211..1740166	+	651	161619731	acsA	BCAN_A1849	-	acetyl-CoA synthetase
1741	 60.73	0	1740322..1740540	-	72	161619732	-	BCAN_A1850	-	hypothetical protein
1742	 60.22	0	1740672..1741649	+	325	161619733	htpX	BCAN_A1851	-	heat shock protein HtpX
1743	 62.73	+1	1741665..1743062	+	465	161619734	-	BCAN_A1852	-	Fmu (Sun) domain-containing protein
1744	 61.56	+1	1743183..1744925	+	580	161619735	-	BCAN_A1853	-	hypothetical protein
1745	 61.47	+1	1745032..1746648	+	538	161619736	purH	BCAN_A1854	-	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
1746	 58.63	0	1746698..1748065	-	455	161619737	-	BCAN_A1855	-	major facilitator transporter
1747	 41.83	-2	1748155..1748307	+	50	161619738	-	BCAN_A1856	-	hypothetical protein
1748	 59.40	0	1748285..1753087	-	1600	161619739	-	BCAN_A1857	-	NAD-glutamate dehydrogenase
1749	 58.26	0	1753352..1753993	-	213	161619740	-	BCAN_A1858	-	hypothetical protein
1750	 58.71	0	1754006..1754809	-	267	161619741	-	BCAN_A1859	-	hypothetical protein
1751	 55.77	0	1754890..1755513	-	207	161619742	-	BCAN_A1860	-	LemA family protein
1752	 52.30	-1	1755510..1755683	-	57	161619743	-	BCAN_A1861	-	hypothetical protein
1753	 62.72	+1	1755783..1756187	-	134	161619744	rpsP	BCAN_A1862	-	30S ribosomal protein S16
1754	 58.41	0	1756254..1756568	-	104	161619745	-	BCAN_A1863	-	chorismate mutase
1755	 60.31	0	1756574..1758145	-	523	161619746	ffh	BCAN_A1864	-	signal recognition particle protein
1756	 59.90	0	1758580..1759407	+	275	161619747	-	BCAN_A1865	-	lytic murein transglycosylase
1757	 55.30	0	1759471..1760112	-	213	161619748	-	BCAN_A1866	-	carbonic anhydrase
1758	 61.87	+1	1760286..1761182	-	298	161619749	-	BCAN_A1867	-	pyridoxamine kinase
1759	 64.24	+1	1761184..1761471	-	95	161619750	-	BCAN_A1868	-	hypothetical protein
1760	 60.32	0	1761844..1763340	-	498	161619751	mmsA	BCAN_A1869	-	methylmalonate-semialdehyde dehydrogenase
1761	 61.81	+1	1763447..1764373	+	308	161619752	-	BCAN_A1870	-	LysR family transcriptional regulator
1762	 60.16	0	1764584..1765228	-	214	161619753	-	BCAN_A1871	-	hypothetical protein
1763	 58.78	0	1765222..1765614	+	130	161619754	-	BCAN_A1872	-	hypothetical protein
1764	 58.82	0	1765296..1765550	-	84	161619755	-	BCAN_A1873	-	hypothetical protein
1765	 60.15	0	1765666..1766202	-	178	161619756	nudH	BCAN_A1874	-	dinucleoside polyphosphate hydrolase
1766	 58.84	0	1766420..1767748	-	442	161619757	-	BCAN_A1875	-	carboxyl-terminal protease
1767	 59.41	0	1767738..1769087	-	449	161619758	-	BCAN_A1876	-	leucine zipper protein 1
1768	 57.22	0	1769200..1770099	-	299	161619759	-	BCAN_A1877	-	hypothetical protein
1769	 56.99	0	1770761..1771132	-	123	161619760	-	BCAN_A1879	-	Iojap-related protein
1770	 58.96	0	1771295..1771969	-	224	161619761	nadD	BCAN_A1880	-	nicotinic acid mononucleotide adenylyltransferase
1771	 61.21	0	1771969..1773252	-	427	161619762	proA	BCAN_A1881	-	gamma-glutamyl phosphate reductase
1772	 60.25	0	1773262..1774398	-	378	161619763	proB	BCAN_A1882	-	gamma-glutamyl kinase
1773	 59.36	0	1774426..1775451	-	341	161619764	-	BCAN_A1883	-	GTPase ObgE
1774	 52.89	-1	1775707..1776831	-	374	161619765	-	BCAN_A1884	-	hypothetical protein
1775	 57.17	0	1777141..1777698	-	185	161619766	-	BCAN_A1885	-	GCN5-related N-acetyltransferase
1776	 57.60	0	1777752..1778402	-	216	161619767	-	BCAN_A1886	-	acetyltransferase
1777	 57.78	0	1778523..1778792	-	89	161619768	rpmA	BCAN_A1887	-	50S ribosomal protein L27
1778	 61.31	0	1778818..1779246	-	142	161619769	rplU	BCAN_A1888	-	50S ribosomal protein L21
1779	 49.72	-1	1779776..1780654	+	292	161619770	-	BCAN_A1890	-	transposase
1780	 52.74	-1	1780871..1782823	+	650	161619771	-	BCAN_A1891	-	hypothetical protein
1781	 51.85	-1	1782820..1783494	+	224	161619772	-	BCAN_A1892	-	hypothetical protein
1782	 48.25	-2	1783907..1784020	+	37	161619773	-	BCAN_A1893	-	hypothetical protein
1783	 48.03	-2	1784053..1784739	-	228	161619774	-	BCAN_A1894	-	transposase
1784	 50.35	-1	1784850..1786289	-	479	161619775	-	BCAN_A1895	-	hypothetical protein
1785	 45.65	-2	1786252..1786389	-	45	161619776	-	BCAN_A1896	-	hypothetical protein
1786	 50.37	-1	1786465..1787139	-	224	161619777	-	BCAN_A1897	-	hypothetical protein
1787	 54.76	0	1787457..1787624	+	55	161619778	-	BCAN_A1898	-	hypothetical protein
1788	 45.10	-2	1788012..1788164	+	50	161619779	-	BCAN_A1901	-	hypothetical protein
1789	 59.05	0	1794277..1796232	+	651	161619780	-	BCAN_A1906	-	peptidase M23B
1790	 59.17	0	1796300..1797526	-	408	161619781	-	BCAN_A1907	-	ATP synthase subunits region ORF 5
1791	 58.82	0	1798199..1800823	-	874	161619782	clpB	BCAN_A1908	-	chaperone clpB
1792	 62.85	+1	1801022..1801780	-	252	161619783	-	BCAN_A1909	-	hypothetical protein
1793	 50.55	-1	1801761..1802033	-	90	161619784	-	BCAN_A1910	-	hypothetical protein
1794	 49.66	-1	1802095..1802241	+	48	161619785	-	BCAN_A1911	-	hypothetical protein
1795	 57.88	0	1802225..1803112	-	295	161619786	-	BCAN_A1912	-	HemK family methyltransferase
1796	 60.19	0	1803109..1804188	-	359	161619787	prfA	BCAN_A1913	-	peptide chain release factor 1
1797	 60.46	0	1804385..1806655	-	756	161619788	ptsI	BCAN_A1914	-	phosphoenolpyruvate-protein phosphotransferase
1798	 59.04	0	1806983..1808254	-	423	161619789	-	BCAN_A1915	-	aspartate kinase
1799	 59.84	0	1808472..1809218	+	248	161619790	ubiG	BCAN_A1916	-	3-demethylubiquinone-9 3-methyltransferase
1800	 59.17	0	1809224..1810117	-	297	161619791	-	BCAN_A1917	-	hypothetical protein
1801	 56.34	0	1810145..1810570	-	141	161619792	-	BCAN_A1918	-	hypothetical protein
1802	 60.00	0	1810576..1811430	-	284	161619793	-	BCAN_A1919	-	Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
1803	 56.93	0	1811441..1811707	-	88	161619794	grxC	BCAN_A1920	-	glutaredoxin 3
1804	 45.53	-2	1811691..1811813	+	40	161619795	-	BCAN_A1921	-	hypothetical protein
1805	 62.10	+1	1811791..1812579	-	262	161619796	gntX	BCAN_A1922	-	protein gntX
1806	 62.53	+1	1812762..1813655	+	297	161619797	bioC	BCAN_A1923	-	biotin synthesis protein BioC
1807	 50.37	-1	1813721..1813855	-	44	161619798	-	BCAN_A1924	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.