IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1423	 54.35	0	1423009..1424112	-	367	161619414	-	BCAN_A1503	-	penicillin acylase precursor
1424	 54.48	0	1424388..1425191	+	267	161619415	-	BCAN_A1504	-	hypothetical protein
1425	 60.83	0	1425395..1425514	-	39	161619416	-	BCAN_A1505	-	hypothetical protein
1426	 48.28	-2	1425798..1425971	+	57	161619417	-	BCAN_A1506	-	hypothetical protein
1427	 43.42	-2	1426025..1426252	-	75	161619418	-	BCAN_A1507	-	hypothetical protein
1428	 59.89	0	1426379..1426732	+	117	161619419	-	BCAN_A1508	-	hypothetical protein
1429	 56.89	0	1426893..1427465	-	190	161619420	-	BCAN_A1509	-	hypothetical protein
1430	 55.35	0	1427701..1428195	+	164	161619421	-	BCAN_A1510	-	phage integrase
1431	 55.51	0	1428613..1429365	+	250	161619422	-	BCAN_A1512	-	26 kDa periplasmic immunogenic protein precursor
1432	 58.84	0	1429540..1429884	-	114	161619423	-	BCAN_A1513	-	hypothetical protein
1433	 54.68	0	1430128..1430586	-	152	161619424	-	BCAN_A1514	-	hypothetical protein
1434	 54.98	0	1430778..1431068	-	96	161619425	-	BCAN_A1515	-	hypothetical protein
1435	 56.81	0	1431092..1433110	-	672	161619426	rpoD	BCAN_A1516	-	RNA polymerase sigma factor RpoD
1436	 48.08	-2	1433141..1433296	-	51	161619427	-	BCAN_A1517	-	hypothetical protein
1437	 61.53	+1	1433578..1435545	-	655	161619428	dnaG	BCAN_A1518	-	DNA primase
1438	 59.39	0	1435915..1437591	+	558	161619429	-	BCAN_A1519	-	Na+ cotransporter
1439	 57.84	0	1437658..1438110	-	150	161619430	-	BCAN_A1520	-	GatB/Yqey domain-containing protein
1440	 60.70	0	1438490..1439713	+	407	161619431	carA	BCAN_A1521	-	carbamoyl phosphate synthase small subunit
1441	 54.63	0	1439526..1439849	+	107	161619432	-	BCAN_A1522	-	hypothetical protein
1442	 61.27	0	1439885..1440811	-	308	161619433	-	BCAN_A1523	-	protein of unknown function zinc metallopeptidase
1443	 54.34	0	1440928..1441446	-	172	161619434	-	BCAN_A1524	-	transmembrane protein
1444	 56.80	0	1441532..1442332	+	266	161619435	-	BCAN_A1525	-	hypothetical protein
1445	 60.50	0	1442567..1446055	+	1162	161619436	carB	BCAN_A1526	-	carbamoyl phosphate synthase large subunit
1446	 48.72	-2	1446403..1446714	+	103	161619437	-	BCAN_A1527	-	hypothetical protein
1447	 58.47	0	1446772..1448637	-	621	161619438	-	BCAN_A1528	-	ABC transporter
1448	 55.19	0	1448827..1449288	+	153	161619439	-	BCAN_A1529	-	NUDIX hydrolase
1449	 58.10	0	1449481..1449690	+	69	161619440	-	BCAN_A1530	-	hypothetical protein
1450	 57.03	0	1449820..1450431	-	203	161619441	gstA	BCAN_A1531	-	protein gstA
1451	 58.27	0	1450681..1451883	+	400	161619442	aspC	BCAN_A1532	-	aspartate aminotransferase
1452	 47.31	-2	1451825..1452010	+	61	161619443	-	BCAN_A1533	-	hypothetical protein
1453	 39.35	-2	1452086..1452301	+	71	161619444	-	BCAN_A1534	-	hypothetical protein
1454	 57.17	0	1452353..1453258	-	301	161619445	-	BCAN_A1535	-	hypothetical protein
1455	 59.59	0	1453329..1454303	-	324	161619446	trxB	BCAN_A1536	-	thioredoxin-disulfide reductase
1456	 57.53	0	1454625..1456025	+	466	161619447	-	BCAN_A1537	-	cation transporter
1457	 50.91	-1	1456032..1456196	+	54	161619448	-	BCAN_A1538	-	hypothetical protein
1458	 59.02	0	1456283..1456753	+	156	161619449	lrp	BCAN_A1539	-	leucine-responsive regulatory protein
1459	 57.65	0	1456760..1457824	-	354	161619450	lpcC	BCAN_A1540	-	lipopolysaccharide core biosynthesis mannosyltransferase lpcC
1460	 55.06	0	1457831..1458304	-	157	161619451	greA	BCAN_A1541	-	transcription elongation factor GreA
1461	 54.92	0	1458573..1459628	-	351	161619452	-	BCAN_A1542	-	hypothetical protein
1462	 48.68	-2	1459618..1459806	-	62	161619453	-	BCAN_A1543	-	hypothetical protein
1463	 60.75	0	1459784..1460695	+	303	161619454	-	BCAN_A1544	-	hypothetical protein
1464	 52.99	0	1460700..1461050	-	116	161619455	-	BCAN_A1545	-	hypothetical protein
1465	 59.87	0	1461328..1462239	+	303	161619456	-	BCAN_A1546	-	extensin family protein
1466	 57.95	0	1462372..1462761	-	129	161619457	-	BCAN_A1547	-	thioesterase superfamily protein
1467	 60.65	0	1462983..1463564	+	193	161619458	-	BCAN_A1548	-	SH3 type 3 domain-containing protein
1468	 60.29	0	1463690..1466512	+	940	161619459	uvrB	BCAN_A1549	-	excinuclease ABC subunit B
1469	 52.31	-1	1467942..1468157	+	71	161619460	-	BCAN_A1551	-	hypothetical protein
1470	 61.79	+1	1468574..1469086	+	170	161619461	-	BCAN_A1552	-	hypothetical protein
1471	 58.30	0	1469145..1469801	-	218	161619462	-	BCAN_A1553	-	beta-lactamase domain-containing protein
1472	 58.51	0	1470015..1470296	-	93	161619463	-	BCAN_A1554	-	hypothetical protein
1473	 46.46	-2	1470471..1470767	+	98	161619464	-	BCAN_A1555	-	hypothetical protein
1474	 53.54	0	1470764..1471357	+	197	161619465	petP	BCAN_A1556	-	HTH-type transcriptional regulator petP
1475	 59.23	0	1471439..1472164	+	241	161619466	petR	BCAN_A1557	-	protein petR
1476	 59.52	0	1472308..1473651	+	447	161619467	-	BCAN_A1558	-	hypothetical protein
1477	 50.39	-1	1473655..1473783	+	42	161619468	-	BCAN_A1559	-	hypothetical protein
1478	 55.17	0	1474083..1474430	-	115	161619469	csaA	BCAN_A1560	-	export-related chaperone CsaA
1479	 50.91	-1	1474408..1474572	-	54	161619470	-	BCAN_A1561	-	hypothetical protein
1480	 56.89	0	1474569..1475069	-	166	161619471	-	BCAN_A1562	-	hypothetical protein
1481	 56.39	0	1475498..1475818	-	106	161619472	-	BCAN_A1563	-	hypothetical protein
1482	 51.77	-1	1475836..1475976	-	46	161619473	-	BCAN_A1564	-	hypothetical protein
1483	 61.58	+1	1476003..1476848	+	281	161619474	lgt	BCAN_A1565	-	prolipoprotein diacylglyceryl transferase
1484	 59.38	0	1476841..1477938	+	365	161619475	-	BCAN_A1566	-	hypothetical protein
1485	 58.33	0	1478118..1478969	+	283	161619476	-	BCAN_A1567	-	hypothetical protein
1486	 57.73	0	1479082..1480233	+	383	161619477	pepQ	BCAN_A1568	-	Xaa-Pro dipeptidase
1487	 58.92	0	1480287..1480841	+	184	161619478	-	BCAN_A1569	-	hypothetical protein
1488	 59.38	0	1481180..1482112	+	310	161619479	prs	BCAN_A1570	-	ribose-phosphate pyrophosphokinase
1489	 58.17	0	1484493..1485116	+	207	161619480	-	BCAN_A1572	-	50S ribosomal protein L25/general stress protein Ctc
1490	 56.97	0	1485145..1485897	+	250	161619481	pth	BCAN_A1573	-	peptidyl-tRNA hydrolase
1491	 59.42	0	1485985..1487088	+	367	161619482	ychF	BCAN_A1574	-	translation-associated GTPase
1492	 57.29	0	1487150..1487650	+	166	161619483	-	BCAN_A1575	-	dehydratase
1493	 57.76	0	1487647..1488129	+	160	161619484	-	BCAN_A1576	-	dehydratase
1494	 56.33	0	1488171..1488731	-	186	161619485	apt	BCAN_A1577	-	adenine phosphoribosyltransferase
1495	 57.43	0	1489039..1489926	-	295	161619486	petC	BCAN_A1578	-	cytochrome c1 precursor
1496	 57.04	0	1489940..1491238	-	432	161619487	petB	BCAN_A1579	-	cytochrome b
1497	 58.16	0	1491260..1491823	-	187	161619488	petA	BCAN_A1580	-	ubiquinol-cytochrome c reductase, iron-sulfur subunit
1498	 58.43	0	1492075..1493943	-	622	161619489	-	BCAN_A1581	-	ABC transporter related
1499	 57.16	0	1494097..1495989	-	630	161619490	-	BCAN_A1582	-	ABC transporter related
1500	 58.54	0	1496110..1496589	+	159	161619491	-	BCAN_A1583	-	tRNA/rRNA methyltransferase (SpoU)
1501	 56.96	0	1496624..1497736	+	370	161619492	-	BCAN_A1584	-	purine nucleoside permease
1502	 62.07	+1	1497848..1498108	-	86	161619493	-	BCAN_A1585	-	hypothetical protein
1503	 57.79	0	1498402..1499313	+	303	161619494	-	BCAN_A1586	-	coproporphyrinogen III oxidase
1504	 61.01	0	1499347..1499841	-	164	161619495	-	BCAN_A1587	-	GCN5-related N-acetyltransferase
1505	 59.36	0	1500874..1502145	-	423	161619496	-	BCAN_A1590	-	Poly-A polymerase/tRNA nucleotidyltransferase
1506	 61.22	0	1502142..1502765	-	207	161619497	-	BCAN_A1591	-	NUDIX hydrolase
1507	 60.06	0	1502762..1503427	-	221	161619498	-	BCAN_A1592	-	hypothetical protein
1508	 61.90	+1	1503547..1504554	+	335	161619499	-	BCAN_A1593	-	hypothetical protein
1509	 63.56	+1	1504554..1505486	+	310	161619500	-	BCAN_A1594	-	hypothetical protein
1510	 61.65	+1	1505483..1508332	+	949	161619501	-	BCAN_A1595	-	hypothetical protein
1511	 60.55	0	1508396..1510471	+	691	161619502	-	BCAN_A1596	-	hypothetical protein
1512	 63.12	+1	1510539..1511045	-	168	161619503	-	BCAN_A1597	-	GCN5-related N-acetyltransferase
1513	 56.81	0	1511349..1512332	+	327	161619504	-	BCAN_A1598	-	glutathione S-transferase
1514	 56.29	0	1512480..1513163	+	227	161619505	alkL	BCAN_A1599	-	Outer membrane protein alkL precursor
1515	 53.51	0	1513197..1513652	-	151	161619506	-	BCAN_A1600	-	hypothetical protein
1516	 60.02	0	1513761..1514663	+	300	161619507	-	BCAN_A1601	-	metallophosphoesterase
1517	 57.52	0	1514864..1516591	-	575	161619508	leuA	BCAN_A1602	-	2-isopropylmalate synthase
1518	 58.49	0	1516723..1516881	-	52	161619509	-	BCAN_A1603	-	hypothetical protein
1519	 58.53	0	1516896..1517804	-	302	161619510	-	BCAN_A1604	-	cation diffusion facilitator family transporter
1520	 45.39	-2	1517814..1518095	+	93	161619511	-	BCAN_A1605	-	hypothetical protein
1521	 58.38	0	1518274..1520469	-	731	161619512	-	BCAN_A1606	-	anthranilate synthase
1522	 52.85	-1	1520411..1520656	+	81	161619513	-	BCAN_A1607	-	hypothetical protein
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.