IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1369	 60.35	0	1363421..1364497	+	358	161619360	-	BCAN_A1445	-	serine/threonine protein kinase
1370	 59.37	0	1364556..1367132	+	858	161619361	pcrA	BCAN_A1446	-	ATP-dependent DNA helicase pcrA
1371	 54.22	0	1367206..1367703	-	165	161619362	-	BCAN_A1447	-	CreA family protein
1372	 56.96	0	1367768..1368457	-	229	161619363	-	BCAN_A1448	-	chloramphenicol acetyltransferase
1373	 55.16	0	1368566..1369156	+	196	161619364	-	BCAN_A1449	-	electron transport protein SCO1/SenC
1374	 58.04	0	1369194..1370051	+	285	161619365	prmA	BCAN_A1450	-	ribosomal protein L11 methyltransferase
1375	 59.44	0	1370117..1371943	+	608	161619366	-	BCAN_A1451	-	peptidase M24
1376	 56.88	0	1371944..1372648	-	234	161619367	-	BCAN_A1452	-	hypothetical protein
1377	 59.95	0	1372648..1374807	-	719	161619368	ligA	BCAN_A1453	-	NAD-dependent DNA ligase LigA
1378	 62.26	+1	1374993..1376672	-	559	161619369	recN	BCAN_A1454	-	DNA repair protein RecN
1379	 56.60	0	1376685..1377548	-	287	161619370	-	BCAN_A1455	-	hypothetical protein
1380	 48.78	-2	1377650..1377895	+	81	161619371	-	BCAN_A1456	-	hypothetical protein
1381	 56.33	0	1377955..1378815	-	286	161619372	lpxC	BCAN_A1457	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
1382	 63.90	+1	1379355..1381055	-	566	161619373	ftsZ	BCAN_A1458	-	cell division protein FtsZ
1383	 60.54	0	1381152..1382474	-	440	161619374	ftsA	BCAN_A1459	-	cell division protein FtsA
1384	 58.25	0	1382471..1383337	-	288	161619375	ftsQ	BCAN_A1460	-	cell division protein FtsQ
1385	 55.56	0	1383394..1384320	-	308	161619376	-	BCAN_A1461	-	D-alanine--D-alanine ligase
1386	 61.09	0	1384563..1385531	-	322	161619377	murB	BCAN_A1462	-	UDP-N-acetylenolpyruvoylglucosamine reductase
1387	 61.02	0	1385531..1386946	-	471	161619378	murC	BCAN_A1463	-	UDP-N-acetylmuramate--L-alanine ligase
1388	 61.93	+1	1386943..1388082	-	379	161619379	murG	BCAN_A1464	-	N-acetylglucosaminyl transferase
1389	 59.15	0	1388309..1389466	-	385	161619380	-	BCAN_A1465	-	cell division protein FtsW
1390	 60.47	0	1389466..1390869	-	467	161619381	murD	BCAN_A1466	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
1391	 57.25	0	1390882..1391964	-	360	161619382	mraY	BCAN_A1467	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
1392	 58.78	0	1391991..1393436	-	481	161619383	murF	BCAN_A1468	-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1393	 59.85	0	1393433..1394899	-	488	161619384	murE	BCAN_A1469	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
1394	 59.38	0	1394960..1396783	-	607	161619385	penA	BCAN_A1470	-	penicillin-binding protein 2
1395	 55.72	0	1396786..1397187	-	133	161619386	-	BCAN_A1471	-	hypothetical protein
1396	 61.48	+1	1397192..1398232	-	346	161619387	mraW	BCAN_A1472	-	S-adenosyl-methyltransferase MraW
1397	 51.48	-1	1398210..1398479	+	89	161619388	-	BCAN_A1473	-	hypothetical protein
1398	 58.79	0	1398730..1400100	+	456	161619389	-	BCAN_A1474	-	manganese transport protein MntH
1399	 55.19	0	1400802..1401446	-	214	161619390	-	BCAN_A1477	-	lytic transglycosylase catalytic
1400	 55.39	0	1401787..1402593	-	268	161619391	ampD	BCAN_A1478	-	protein ampD
1401	 54.43	0	1402590..1403300	-	236	161619392	djlA	BCAN_A1479	-	DnaJ-like protein djlA
1402	 58.52	0	1403420..1403824	-	134	161619393	-	BCAN_A1480	-	hypothetical protein
1403	 59.47	0	1404128..1404961	+	277	161619394	-	BCAN_A1481	-	glycosy hydrolase family protein
1404	 58.65	0	1406375..1407310	+	311	161619395	-	BCAN_A1484	-	auxin efflux carrier
1405	 57.68	0	1407745..1408656	-	303	161619396	metF	BCAN_A1485	-	5,10-methylenetetrahydrofolate reductase
1406	 59.84	0	1408702..1409727	-	341	161619397	-	BCAN_A1486	-	methyltransferase type 11
1407	 58.64	0	1409847..1410170	+	107	161619398	-	BCAN_A1487	-	hypothetical protein
1408	 57.09	0	1410225..1411550	-	441	161619399	cit	BCAN_A1488	-	metabolite:proton symporter family protein
1409	 50.20	-1	1411558..1411812	+	84	161619400	-	BCAN_A1489	-	hypothetical protein
1410	 56.12	0	1411986..1412753	-	255	161619401	tam	BCAN_A1490	-	trans-aconitate 2-methyltransferase
1411	 56.18	0	1412826..1414475	-	549	161619402	-	BCAN_A1491	-	putative ABC transporter ATP-binding protein
1412	 61.11	0	1414555..1414734	-	59	161619403	-	BCAN_A1492	-	hypothetical protein
1413	 57.04	0	1414971..1415915	+	314	161619404	-	BCAN_A1493	-	lysophospholipase L2
1414	 51.65	-1	1415954..1416619	+	221	161619405	-	BCAN_A1494	-	hypothetical protein
1415	 56.19	0	1416713..1417399	-	228	161619406	-	BCAN_A1495	-	hypothetical protein
1416	 57.21	0	1417750..1418997	+	415	161619407	-	BCAN_A1496	-	biphenyl dioxygenase subunit alpha
1417	 59.16	0	1419031..1420149	+	372	161619408	-	BCAN_A1497	-	ferredoxin, leaf L-A
1418	 55.86	0	1420152..1420373	-	73	161619409	-	BCAN_A1498	-	hypothetical protein
1419	 56.35	0	1420511..1421140	+	209	161619410	-	BCAN_A1499	-	nicotinamidase
1420	 54.43	0	1421137..1422198	-	353	161619411	-	BCAN_A1500	-	hypothetical protein
1421	 53.93	0	1422545..1422811	+	88	161619412	-	BCAN_A1501	-	hypothetical protein
1422	 51.11	-1	1422767..1422946	-	59	161619413	-	BCAN_A1502	-	hypothetical protein
1423	 54.35	0	1423009..1424112	-	367	161619414	-	BCAN_A1503	-	penicillin acylase precursor
1424	 54.48	0	1424388..1425191	+	267	161619415	-	BCAN_A1504	-	hypothetical protein
1425	 60.83	0	1425395..1425514	-	39	161619416	-	BCAN_A1505	-	hypothetical protein
1426	 48.28	-2	1425798..1425971	+	57	161619417	-	BCAN_A1506	-	hypothetical protein
1427	 43.42	-2	1426025..1426252	-	75	161619418	-	BCAN_A1507	-	hypothetical protein
1428	 59.89	0	1426379..1426732	+	117	161619419	-	BCAN_A1508	-	hypothetical protein
1429	 56.89	0	1426893..1427465	-	190	161619420	-	BCAN_A1509	-	hypothetical protein
1430	 55.35	0	1427701..1428195	+	164	161619421	-	BCAN_A1510	-	phage integrase
1431	 55.51	0	1428613..1429365	+	250	161619422	-	BCAN_A1512	-	26 kDa periplasmic immunogenic protein precursor
1432	 58.84	0	1429540..1429884	-	114	161619423	-	BCAN_A1513	-	hypothetical protein
1433	 54.68	0	1430128..1430586	-	152	161619424	-	BCAN_A1514	-	hypothetical protein
1434	 54.98	0	1430778..1431068	-	96	161619425	-	BCAN_A1515	-	hypothetical protein
1435	 56.81	0	1431092..1433110	-	672	161619426	rpoD	BCAN_A1516	-	RNA polymerase sigma factor RpoD
1436	 48.08	-2	1433141..1433296	-	51	161619427	-	BCAN_A1517	-	hypothetical protein
1437	 61.53	+1	1433578..1435545	-	655	161619428	dnaG	BCAN_A1518	-	DNA primase
1438	 59.39	0	1435915..1437591	+	558	161619429	-	BCAN_A1519	-	Na+ cotransporter
1439	 57.84	0	1437658..1438110	-	150	161619430	-	BCAN_A1520	-	GatB/Yqey domain-containing protein
1440	 60.70	0	1438490..1439713	+	407	161619431	carA	BCAN_A1521	-	carbamoyl phosphate synthase small subunit
1441	 54.63	0	1439526..1439849	+	107	161619432	-	BCAN_A1522	-	hypothetical protein
1442	 61.27	0	1439885..1440811	-	308	161619433	-	BCAN_A1523	-	protein of unknown function zinc metallopeptidase
1443	 54.34	0	1440928..1441446	-	172	161619434	-	BCAN_A1524	-	transmembrane protein
1444	 56.80	0	1441532..1442332	+	266	161619435	-	BCAN_A1525	-	hypothetical protein
1445	 60.50	0	1442567..1446055	+	1162	161619436	carB	BCAN_A1526	-	carbamoyl phosphate synthase large subunit
1446	 48.72	-2	1446403..1446714	+	103	161619437	-	BCAN_A1527	-	hypothetical protein
1447	 58.47	0	1446772..1448637	-	621	161619438	-	BCAN_A1528	-	ABC transporter
1448	 55.19	0	1448827..1449288	+	153	161619439	-	BCAN_A1529	-	NUDIX hydrolase
1449	 58.10	0	1449481..1449690	+	69	161619440	-	BCAN_A1530	-	hypothetical protein
1450	 57.03	0	1449820..1450431	-	203	161619441	gstA	BCAN_A1531	-	protein gstA
1451	 58.27	0	1450681..1451883	+	400	161619442	aspC	BCAN_A1532	-	aspartate aminotransferase
1452	 47.31	-2	1451825..1452010	+	61	161619443	-	BCAN_A1533	-	hypothetical protein
1453	 39.35	-2	1452086..1452301	+	71	161619444	-	BCAN_A1534	-	hypothetical protein
1454	 57.17	0	1452353..1453258	-	301	161619445	-	BCAN_A1535	-	hypothetical protein
1455	 59.59	0	1453329..1454303	-	324	161619446	trxB	BCAN_A1536	-	thioredoxin-disulfide reductase
1456	 57.53	0	1454625..1456025	+	466	161619447	-	BCAN_A1537	-	cation transporter
1457	 50.91	-1	1456032..1456196	+	54	161619448	-	BCAN_A1538	-	hypothetical protein
1458	 59.02	0	1456283..1456753	+	156	161619449	lrp	BCAN_A1539	-	leucine-responsive regulatory protein
1459	 57.65	0	1456760..1457824	-	354	161619450	lpcC	BCAN_A1540	-	lipopolysaccharide core biosynthesis mannosyltransferase lpcC
1460	 55.06	0	1457831..1458304	-	157	161619451	greA	BCAN_A1541	-	transcription elongation factor GreA
1461	 54.92	0	1458573..1459628	-	351	161619452	-	BCAN_A1542	-	hypothetical protein
1462	 48.68	-2	1459618..1459806	-	62	161619453	-	BCAN_A1543	-	hypothetical protein
1463	 60.75	0	1459784..1460695	+	303	161619454	-	BCAN_A1544	-	hypothetical protein
1464	 52.99	0	1460700..1461050	-	116	161619455	-	BCAN_A1545	-	hypothetical protein
1465	 59.87	0	1461328..1462239	+	303	161619456	-	BCAN_A1546	-	extensin family protein
1466	 57.95	0	1462372..1462761	-	129	161619457	-	BCAN_A1547	-	thioesterase superfamily protein
1467	 60.65	0	1462983..1463564	+	193	161619458	-	BCAN_A1548	-	SH3 type 3 domain-containing protein
1468	 60.29	0	1463690..1466512	+	940	161619459	uvrB	BCAN_A1549	-	excinuclease ABC subunit B
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.