IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1324	 57.56	0	1325983..1326795	-	270	161619315	crcB	BCAN_A1397	-	camphor resistance protein CrcB
1325	 56.67	0	1326808..1327197	-	129	161619316	crcB	BCAN_A1398	-	camphor resistance protein CrcB
1326	 56.43	0	1327466..1328491	+	341	161619317	-	BCAN_A1399	-	hypothetical protein
1327	 52.43	-1	1328498..1329094	+	198	161619318	-	BCAN_A1400	-	hypothetical protein
1328	 51.95	-1	1328624..1329058	-	144	161619319	-	BCAN_A1401	-	pyridoxamine 5'-phosphate oxidase-related FMN-binding
1329	 47.83	-2	1329060..1329197	+	45	161619320	-	BCAN_A1402	-	hypothetical protein
1330	 57.93	0	1329210..1330136	-	308	161619321	-	BCAN_A1403	-	PhzF family phenazine biosynthesis protein
1331	 58.88	0	1330241..1330972	-	243	161619322	-	BCAN_A1404	-	NUDIX hydrolase
1332	 55.04	0	1332173..1332688	+	171	161619323	-	BCAN_A1408	-	BA14K family protein
1333	 57.34	0	1332734..1333966	-	410	161619324	-	BCAN_A1409	-	GntR family transcriptional regulator
1334	 50.00	-1	1334048..1334329	-	93	161619325	-	BCAN_A1410	-	hypothetical protein
1335	 58.04	0	1334351..1335370	-	339	161619326	ilvC	BCAN_A1411	-	ketol-acid reductoisomerase
1336	 60.12	0	1335426..1336067	-	213	161619327	-	BCAN_A1412	-	TetR family transcriptional regulator
1337	 46.79	-2	1336125..1336280	+	51	161619328	-	BCAN_A1413	-	hypothetical protein
1338	 58.13	0	1336277..1338232	-	651	161619329	kup	BCAN_A1414	-	potassium transport system protein kup
1339	 57.23	0	1338375..1338533	-	52	161619330	-	BCAN_A1415	-	hypothetical protein
1340	 59.51	0	1338602..1339342	-	246	161619331	pdxJ	BCAN_A1416	-	pyridoxal phosphate biosynthetic protein PdxJ
1341	 53.48	0	1339639..1340040	+	133	161619332	-	BCAN_A1417	-	hypothetical protein
1342	 57.93	0	1340041..1341207	-	388	161619333	-	BCAN_A1418	-	hypothetical protein
1343	 52.38	-1	1341161..1341307	+	48	161619334	-	BCAN_A1419	-	hypothetical protein
1344	 58.46	0	1341346..1341918	-	190	161619335	ilvN	BCAN_A1420	-	acetolactate synthase 3 regulatory subunit
1345	 58.50	0	1341937..1343760	-	607	161619336	ilvB	BCAN_A1421	-	acetolactate synthase 3 catalytic subunit
1346	 59.38	0	1344008..1344940	-	310	161619337	miaA	BCAN_A1422	-	tRNA delta(2)-isopentenylpyrophosphate transferase
1347	 60.22	0	1344958..1345857	+	299	161619338	serB	BCAN_A1423	-	phosphoserine phosphatase SerB
1348	 59.14	0	1345898..1347079	-	393	161619339	-	BCAN_A1424	-	hypothetical protein
1349	 53.47	0	1347055..1347198	-	47	161619340	-	BCAN_A1425	-	hypothetical protein
1350	 58.67	0	1347209..1348783	-	524	161619341	degP	BCAN_A1426	-	protease Do
1351	 59.68	0	1349007..1349192	-	61	161619342	-	BCAN_A1427	-	hypothetical protein
1352	 60.13	0	1349213..1350115	-	300	161619343	-	BCAN_A1428	-	HflC protein
1353	 58.90	0	1350115..1351311	-	398	161619344	hflK	BCAN_A1429	-	HflK protein
1354	 57.61	0	1351388..1351906	-	172	161619345	-	BCAN_A1430	-	dihydrofolate reductase type 3
1355	 55.35	0	1351909..1352703	-	264	161619346	thyA	BCAN_A1431	-	thymidylate synthase
1356	 57.69	0	1352804..1353115	-	103	161619347	-	BCAN_A1432	-	hypothetical protein
1357	 47.62	-2	1353543..1353584	+	13	161619348	-	BCAN_A1433	-	tmRNA tag peptide
1358	 60.40	0	1353688..1354899	-	403	161619349	-	BCAN_A1434	-	Bcr/CflA subfamily drug resistance transporter
1359	 51.70	-1	1354916..1355062	-	48	161619350	-	BCAN_A1435	-	hypothetical protein
1360	 56.94	0	1355293..1355919	+	208	161619351	-	BCAN_A1436	-	TetR family transcriptional regulator
1361	 53.86	0	1356000..1356569	+	189	161619352	-	BCAN_A1437	-	hypothetical protein
1362	 54.80	0	1356682..1356858	+	58	161619353	-	BCAN_A1438	-	hypothetical protein
1363	 52.24	-1	1356950..1357150	+	66	161619354	-	BCAN_A1439	-	hypothetical protein
1364	 57.54	0	1357147..1357398	+	83	161619355	-	BCAN_A1440	-	hypothetical protein
1365	 60.20	0	1357426..1361169	-	1247	161619356	-	BCAN_A1441	-	AsmA family protein
1366	 48.23	-2	1361224..1361364	-	46	161619357	-	BCAN_A1442	-	hypothetical protein
1367	 59.49	0	1361361..1362767	-	468	161619358	-	BCAN_A1443	-	hypothetical protein
1368	 60.39	0	1362792..1363301	-	169	161619359	-	BCAN_A1444	-	hypothetical protein
1369	 60.35	0	1363421..1364497	+	358	161619360	-	BCAN_A1445	-	serine/threonine protein kinase
1370	 59.37	0	1364556..1367132	+	858	161619361	pcrA	BCAN_A1446	-	ATP-dependent DNA helicase pcrA
1371	 54.22	0	1367206..1367703	-	165	161619362	-	BCAN_A1447	-	CreA family protein
1372	 56.96	0	1367768..1368457	-	229	161619363	-	BCAN_A1448	-	chloramphenicol acetyltransferase
1373	 55.16	0	1368566..1369156	+	196	161619364	-	BCAN_A1449	-	electron transport protein SCO1/SenC
1374	 58.04	0	1369194..1370051	+	285	161619365	prmA	BCAN_A1450	-	ribosomal protein L11 methyltransferase
1375	 59.44	0	1370117..1371943	+	608	161619366	-	BCAN_A1451	-	peptidase M24
1376	 56.88	0	1371944..1372648	-	234	161619367	-	BCAN_A1452	-	hypothetical protein
1377	 59.95	0	1372648..1374807	-	719	161619368	ligA	BCAN_A1453	-	NAD-dependent DNA ligase LigA
1378	 62.26	+1	1374993..1376672	-	559	161619369	recN	BCAN_A1454	-	DNA repair protein RecN
1379	 56.60	0	1376685..1377548	-	287	161619370	-	BCAN_A1455	-	hypothetical protein
1380	 48.78	-2	1377650..1377895	+	81	161619371	-	BCAN_A1456	-	hypothetical protein
1381	 56.33	0	1377955..1378815	-	286	161619372	lpxC	BCAN_A1457	-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
1382	 63.90	+1	1379355..1381055	-	566	161619373	ftsZ	BCAN_A1458	-	cell division protein FtsZ
1383	 60.54	0	1381152..1382474	-	440	161619374	ftsA	BCAN_A1459	-	cell division protein FtsA
1384	 58.25	0	1382471..1383337	-	288	161619375	ftsQ	BCAN_A1460	-	cell division protein FtsQ
1385	 55.56	0	1383394..1384320	-	308	161619376	-	BCAN_A1461	-	D-alanine--D-alanine ligase
1386	 61.09	0	1384563..1385531	-	322	161619377	murB	BCAN_A1462	-	UDP-N-acetylenolpyruvoylglucosamine reductase
1387	 61.02	0	1385531..1386946	-	471	161619378	murC	BCAN_A1463	-	UDP-N-acetylmuramate--L-alanine ligase
1388	 61.93	+1	1386943..1388082	-	379	161619379	murG	BCAN_A1464	-	N-acetylglucosaminyl transferase
1389	 59.15	0	1388309..1389466	-	385	161619380	-	BCAN_A1465	-	cell division protein FtsW
1390	 60.47	0	1389466..1390869	-	467	161619381	murD	BCAN_A1466	-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
1391	 57.25	0	1390882..1391964	-	360	161619382	mraY	BCAN_A1467	-	phospho-N-acetylmuramoyl-pentapeptide-transferase
1392	 58.78	0	1391991..1393436	-	481	161619383	murF	BCAN_A1468	-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
1393	 59.85	0	1393433..1394899	-	488	161619384	murE	BCAN_A1469	-	UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
1394	 59.38	0	1394960..1396783	-	607	161619385	penA	BCAN_A1470	-	penicillin-binding protein 2
1395	 55.72	0	1396786..1397187	-	133	161619386	-	BCAN_A1471	-	hypothetical protein
1396	 61.48	+1	1397192..1398232	-	346	161619387	mraW	BCAN_A1472	-	S-adenosyl-methyltransferase MraW
1397	 51.48	-1	1398210..1398479	+	89	161619388	-	BCAN_A1473	-	hypothetical protein
1398	 58.79	0	1398730..1400100	+	456	161619389	-	BCAN_A1474	-	manganese transport protein MntH
1399	 55.19	0	1400802..1401446	-	214	161619390	-	BCAN_A1477	-	lytic transglycosylase catalytic
1400	 55.39	0	1401787..1402593	-	268	161619391	ampD	BCAN_A1478	-	protein ampD
1401	 54.43	0	1402590..1403300	-	236	161619392	djlA	BCAN_A1479	-	DnaJ-like protein djlA
1402	 58.52	0	1403420..1403824	-	134	161619393	-	BCAN_A1480	-	hypothetical protein
1403	 59.47	0	1404128..1404961	+	277	161619394	-	BCAN_A1481	-	glycosy hydrolase family protein
1404	 58.65	0	1406375..1407310	+	311	161619395	-	BCAN_A1484	-	auxin efflux carrier
1405	 57.68	0	1407745..1408656	-	303	161619396	metF	BCAN_A1485	-	5,10-methylenetetrahydrofolate reductase
1406	 59.84	0	1408702..1409727	-	341	161619397	-	BCAN_A1486	-	methyltransferase type 11
1407	 58.64	0	1409847..1410170	+	107	161619398	-	BCAN_A1487	-	hypothetical protein
1408	 57.09	0	1410225..1411550	-	441	161619399	cit	BCAN_A1488	-	metabolite:proton symporter family protein
1409	 50.20	-1	1411558..1411812	+	84	161619400	-	BCAN_A1489	-	hypothetical protein
1410	 56.12	0	1411986..1412753	-	255	161619401	tam	BCAN_A1490	-	trans-aconitate 2-methyltransferase
1411	 56.18	0	1412826..1414475	-	549	161619402	-	BCAN_A1491	-	putative ABC transporter ATP-binding protein
1412	 61.11	0	1414555..1414734	-	59	161619403	-	BCAN_A1492	-	hypothetical protein
1413	 57.04	0	1414971..1415915	+	314	161619404	-	BCAN_A1493	-	lysophospholipase L2
1414	 51.65	-1	1415954..1416619	+	221	161619405	-	BCAN_A1494	-	hypothetical protein
1415	 56.19	0	1416713..1417399	-	228	161619406	-	BCAN_A1495	-	hypothetical protein
1416	 57.21	0	1417750..1418997	+	415	161619407	-	BCAN_A1496	-	biphenyl dioxygenase subunit alpha
1417	 59.16	0	1419031..1420149	+	372	161619408	-	BCAN_A1497	-	ferredoxin, leaf L-A
1418	 55.86	0	1420152..1420373	-	73	161619409	-	BCAN_A1498	-	hypothetical protein
1419	 56.35	0	1420511..1421140	+	209	161619410	-	BCAN_A1499	-	nicotinamidase
1420	 54.43	0	1421137..1422198	-	353	161619411	-	BCAN_A1500	-	hypothetical protein
1421	 53.93	0	1422545..1422811	+	88	161619412	-	BCAN_A1501	-	hypothetical protein
1422	 51.11	-1	1422767..1422946	-	59	161619413	-	BCAN_A1502	-	hypothetical protein
1423	 54.35	0	1423009..1424112	-	367	161619414	-	BCAN_A1503	-	penicillin acylase precursor
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.