IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
1135	 58.68	0	1151276..1151713	-	145	161619126	-	BCAN_A1193	-	hypothetical protein
1136	 59.35	0	1151778..1153307	+	509	161619127	-	BCAN_A1194	-	hypothetical protein
1137	 59.26	0	1151802..1153205	-	467	161619128	sdaA	BCAN_A1195	-	L-serine ammonia-lyase
1138	 50.79	-1	1153403..1153528	-	41	161619129	-	BCAN_A1196	-	hypothetical protein
1139	 55.97	0	1153727..1154521	-	264	161619130	-	BCAN_A1197	-	hypothetical protein
1140	 58.36	0	1154696..1155682	+	328	161619131	-	BCAN_A1198	-	hypothetical protein
1141	 55.81	0	1155693..1156079	-	128	161619132	-	BCAN_A1199	-	hypothetical protein
1142	 54.92	0	1156317..1156682	+	121	161619133	-	BCAN_A1200	-	hypothetical protein
1143	 59.77	0	1156697..1157044	+	115	161619134	-	BCAN_A1201	-	hypothetical protein
1144	 55.56	0	1157115..1157429	+	104	161619135	-	BCAN_A1202	-	protein of unknown function DUF883 ElaB
1145	 49.46	-1	1157486..1157578	+	30	161619136	-	BCAN_A1203	-	hypothetical protein
1146	 57.48	0	1157874..1158341	+	155	161619137	queF	BCAN_A1204	-	7-cyano-7-deazaguanine reductase
1147	 48.00	-2	1158345..1158494	-	49	161619138	-	BCAN_A1205	-	hypothetical protein
1148	 59.32	0	1158472..1158648	+	58	161619139	-	BCAN_A1206	-	hypothetical protein
1149	 53.96	0	1158680..1159222	+	180	161619140	-	BCAN_A1207	-	hypothetical protein
1150	 57.96	0	1159225..1160637	-	470	161619141	-	BCAN_A1208	-	hypothetical protein
1151	 59.26	0	1160801..1161556	+	251	161619142	pccB	BCAN_A1209	-	propionyl-CoA carboxylase beta chain
1152	 48.57	-2	1161526..1161630	+	34	161619143	-	BCAN_A1210	-	hypothetical protein
1153	 59.63	0	1161641..1163644	+	667	161619144	-	BCAN_A1211	-	propionyl-coenzyme A carboxylase, alpha polypeptide
1154	 58.81	0	1163705..1165843	+	712	161619145	-	BCAN_A1212	-	methylmalonyl-CoA mutase
1155	 56.20	0	1165950..1166312	-	120	161619146	-	BCAN_A1213	-	hypothetical protein
1156	 57.15	0	1166499..1168547	-	682	161619147	-	BCAN_A1214	-	TRAP transporter, 4TM/12TM fusion protein
1157	 51.70	-1	1168588..1168734	-	48	161619148	-	BCAN_A1215	-	hypothetical protein
1158	 57.68	0	1168784..1169773	-	329	161619149	-	BCAN_A1216	-	TRAP transporter solute receptor TAXI family protein
1159	 57.55	0	1169919..1170752	-	277	161619150	murI	BCAN_A1217	-	glutamate racemase
1160	 57.52	0	1170749..1171579	-	276	161619151	-	BCAN_A1218	-	RNA methyltransferase
1161	 58.29	0	1171759..1172343	+	194	161619152	-	BCAN_A1219	-	PfpI family intracellular peptidase
1162	 58.15	0	1172432..1172842	+	136	161619153	-	BCAN_A1220	-	hypothetical protein
1163	 57.28	0	1172970..1174184	+	404	161619154	-	BCAN_A1221	-	isocitrate dehydrogenase
1164	 58.09	0	1174406..1175851	+	481	161619155	phoA	BCAN_A1222	-	bacterial alkaline phosphatase
1165	 58.77	0	1176003..1178660	-	885	161619156	alaS	BCAN_A1223	-	alanyl-tRNA synthetase
1166	 57.00	0	1179053..1180138	-	361	161619157	recA	BCAN_A1224	-	recombinase A
1167	 49.21	-1	1180308..1180433	-	41	161619158	-	BCAN_A1225	-	hypothetical protein
1168	 59.58	0	1180469..1181131	-	220	161619159	-	BCAN_A1226	-	OmpA/MotB domain-containing protein
1169	 56.07	0	1181218..1181802	-	194	161619160	-	BCAN_A1227	-	lytic transglycosylase catalytic
1170	 59.89	0	1181926..1183239	-	437	161619161	-	BCAN_A1228	-	recombination factor protein RarA
1171	 59.09	0	1183386..1184810	-	474	161619162	degP	BCAN_A1229	-	protease Do
1172	 58.04	0	1185090..1185518	-	142	161619163	rplQ	BCAN_A1230	-	50S ribosomal protein L17
1173	 57.10	0	1185680..1186693	-	337	161619164	rpoA	BCAN_A1231	-	DNA-directed RNA polymerase subunit alpha
1174	 61.79	+1	1186809..1187198	-	129	161619165	rpsK	BCAN_A1232	-	30S ribosomal protein S11
1175	 56.91	0	1187326..1187694	-	122	161619166	rpsM	BCAN_A1233	-	30S ribosomal protein S13
1176	 49.43	-1	1187688..1187861	+	57	161619167	-	BCAN_A1234	-	hypothetical protein
1177	 58.97	0	1188004..1188588	-	194	161619168	-	BCAN_A1235	-	adenylate kinase
1178	 55.18	0	1188585..1189925	-	446	161619169	-	BCAN_A1236	-	preprotein translocase subunit SecY
1179	 59.66	0	1190086..1190556	-	156	161619170	rplO	BCAN_A1237	-	50S ribosomal protein L15
1180	 58.59	0	1190577..1190774	-	65	161619171	rpmD	BCAN_A1238	-	50S ribosomal protein L30
1181	 60.07	0	1190892..1191452	-	186	161619172	rpsE	BCAN_A1239	-	30S ribosomal protein S5
1182	 61.98	+1	1191494..1191856	-	120	161619173	rplR	BCAN_A1240	-	50S ribosomal protein L18
1183	 57.49	0	1191869..1192402	-	177	161619174	rplF	BCAN_A1241	-	50S ribosomal protein L6
1184	 57.89	0	1192441..1192839	-	132	161619175	-	BCAN_A1242	-	30S ribosomal protein S8
1185	 57.84	0	1192850..1193155	-	101	161619176	-	BCAN_A1243	-	30S ribosomal protein S14
1186	 54.84	0	1193183..1193740	-	185	161619177	rplE	BCAN_A1244	-	50S ribosomal protein L5
1187	 57.05	0	1193733..1194044	-	103	161619178	rplX	BCAN_A1245	-	50S ribosomal protein L24
1188	 54.74	0	1194057..1194425	-	122	161619179	rplN	BCAN_A1246	-	50S ribosomal protein L14
1189	 53.50	0	1194494..1194736	-	80	161619180	rpsQ	BCAN_A1247	-	30S ribosomal protein S17
1190	 58.21	0	1194749..1194949	-	66	161619181	rpmC	BCAN_A1248	-	50S ribosomal protein L29
1191	 58.21	0	1194962..1195375	-	137	161619182	rplP	BCAN_A1249	-	50S ribosomal protein L16
1192	 57.24	0	1195415..1196125	-	236	161619183	rpsC	BCAN_A1250	-	30S ribosomal protein S3
1193	 59.23	0	1196125..1196514	-	129	161619184	rplV	BCAN_A1251	-	50S ribosomal protein L22
1194	 54.48	0	1196517..1196795	-	92	161619185	rpsS	BCAN_A1252	-	30S ribosomal protein S19
1195	 59.95	0	1196811..1197644	-	277	161619186	rplB	BCAN_A1253	-	50S ribosomal protein L2
1196	 57.48	0	1197666..1197959	-	97	161619187	rplW	BCAN_A1254	-	50S ribosomal protein L23
1197	 60.55	0	1197956..1198576	-	206	161619188	rplD	BCAN_A1255	-	50S ribosomal protein L4
1198	 58.40	0	1198576..1199289	-	237	161619189	rplC	BCAN_A1256	-	50S ribosomal protein L3
1199	 57.28	0	1199319..1199627	-	102	161619190	rpsJ	BCAN_A1257	-	30S ribosomal protein S10
1200	 58.93	0	1199688..1200863	-	391	161619191	tuf	BCAN_A1258	-	elongation factor Tu
1201	 56.98	0	1200927..1203011	-	694	161619192	fusA	BCAN_A1259	-	elongation factor G
1202	 57.32	0	1203042..1203512	-	156	161619193	rpsG	BCAN_A1260	-	30S ribosomal protein S7
1203	 57.53	0	1203579..1203950	-	123	161619194	rpsL	BCAN_A1261	-	30S ribosomal protein S12
1204	 52.59	-1	1204040..1204174	-	44	161619195	-	BCAN_A1262	-	hypothetical protein
1205	 52.42	-1	1204382..1204753	+	123	161619196	-	BCAN_A1263	-	hypothetical protein
1206	 57.96	0	1204860..1209062	-	1400	161619197	rpoC	BCAN_A1264	-	DNA-directed RNA polymerase subunit beta'
1207	 53.17	0	1209059..1209184	-	41	161619198	-	BCAN_A1265	-	hypothetical protein
1208	 57.72	0	1209211..1213344	-	1377	161619199	rpoB	BCAN_A1266	-	DNA-directed RNA polymerase subunit beta
1209	 59.20	0	1213552..1213926	-	124	161619200	rplL	BCAN_A1267	-	50S ribosomal protein L7/L12
1210	 58.38	0	1213978..1214496	-	172	161619201	rplJ	BCAN_A1268	-	50S ribosomal protein L10
1211	 56.70	0	1214887..1215588	-	233	161619202	rplA	BCAN_A1269	-	50S ribosomal protein L1
1212	 58.04	0	1215593..1216021	-	142	161619203	rplK	BCAN_A1270	-	50S ribosomal protein L11
1213	 52.08	-1	1216224..1216751	-	175	161619204	nusG	BCAN_A1271	-	transcription antitermination protein NusG
1214	 53.73	0	1216775..1216975	-	66	161619205	secE	BCAN_A1272	-	preprotein translocase subunit SecE
1215	 58.93	0	1217649..1218824	-	391	161619206	tuf	BCAN_A1274	-	elongation factor Tu
1216	 54.23	0	1218775..1218975	+	66	161619207	-	BCAN_A1275	-	hypothetical protein
1217	 61.21	0	1219455..1220315	+	286	161619208	-	BCAN_A1278	-	RNA methyltransferase
1218	 57.61	0	1220977..1221738	-	253	161619209	-	BCAN_A1279	-	rhomboid family protein
1219	 58.72	0	1222097..1222738	+	213	161619210	-	BCAN_A1280	-	hypothetical protein
1220	 59.57	0	1222982..1223587	+	201	161619211	-	BCAN_A1281	-	transglutaminase family protein cysteine peptidase BTLCP
1221	 57.58	0	1223666..1224193	-	175	161619212	-	BCAN_A1282	-	hypothetical protein
1222	 48.63	-2	1224464..1224718	-	84	161619213	-	BCAN_A1283	-	hypothetical protein
1223	 57.94	0	1224966..1225790	-	274	161619214	cysE	BCAN_A1284	-	serine O-acetyltransferase
1224	 58.24	0	1225965..1226735	-	256	161619215	-	BCAN_A1285	-	alpha/beta hydrolase fold
1225	 54.37	0	1226769..1227248	-	159	161619216	-	BCAN_A1286	-	hypothetical protein
1226	 59.62	0	1227622..1228203	-	193	161619217	cspG	BCAN_A1287	-	cold shock-like protein cspG
1227	 44.20	-2	1228327..1228464	-	45	161619218	-	BCAN_A1288	-	hypothetical protein
1228	 58.28	0	1228566..1229006	+	146	161619219	-	BCAN_A1289	-	glyoxalase/bleomycin resistance protein/dioxygenase
1229	 61.81	+1	1229058..1230086	-	342	161619220	-	BCAN_A1290	-	import inner membrane translocase subunit Tim44
1230	 61.51	+1	1230248..1232032	-	594	161619221	recJ	BCAN_A1291	-	single-stranded-DNA-specific exonuclease RecJ
1231	 53.67	0	1232082..1233143	-	353	161619222	-	BCAN_A1292	-	D-alanine--D-alanine ligase
1232	 45.39	-2	1233172..1233312	+	46	161619223	-	BCAN_A1293	-	hypothetical protein
1233	 61.20	0	1233446..1234432	-	328	161619224	glpX	BCAN_A1294	-	fructose 1,6-bisphosphatase II
1234	 58.86	0	1234825..1236144	-	439	161619225	-	BCAN_A1295	-	homoserine dehydrogenase
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.