IslandPathversion 1.0

IslandPath Analysis: Brucella canis ATCC 23365



Each circle in the graphic corresponds to a predicted protein-coding ORF in the genome. Circle colours indicate if an ORF has a higher or lower %G+C than cutoffs you set below --(default is +/- 3.48 of the mean %G+C). Strike lines across the circles represent regions with dinucleotide bias above a pre-determined cutoff. Click on a circle to view a different portion of the table presented below the graph (default is the first 100 ORFs).
A yellow circle indicates its %G+C value is bigger than the high value. A green circle indicates its %G+C value is bigger than the low value and smaller than the high value. A pink circle indicates its %G+C value is smaller than the low value. A strike line across the circles indicates the region has dinucleotide bais above 1 STD DEV. A black verticle bar indicates a transfer RNA gene lies between the two ORFs. A purple verticle bar indicates a ribosomal RNA gene lies between the two ORFs. A deep blue verticle bar indicates both a tRNA and rRNA gene lie between the two ORFs. A black square indicates the dot is annotated as a transposase. A black triangle indicates the dot is annotated as an integrase. Low: High: Mean: 57.15 STD DEV: 4.17
Brucella canis ATCC 23365 chromosome I, complete sequence - 1..2105969
2102 proteins
Pos	%G+C	SD	Location	Strand	Length	PID	Gene	Synonym	Code	Product
70	 53.52	0	81176..81913	+	245	161618061	-	BCAN_A0074	-	invasion associated locus B family protein
71	 58.23	0	81992..83212	-	406	161618062	argG	BCAN_A0075	-	argininosuccinate synthase
72	 57.74	0	84062..84565	-	167	161618063	-	BCAN_A0077	-	hypothetical protein
73	 59.22	0	84599..85834	-	411	161618064	-	BCAN_A0078	-	radical SAM protein
74	 51.04	-1	85778..85969	+	63	161618065	-	BCAN_A0079	-	hypothetical protein
75	 55.38	0	85954..86148	+	64	161618066	-	BCAN_A0080	-	hypothetical protein
76	 57.54	0	86094..86597	-	167	161618067	-	BCAN_A0081	-	hypothetical protein
77	 63.28	+1	87053..87436	-	127	161618068	-	BCAN_A0082	-	hypothetical protein
78	 54.76	0	87524..87817	-	97	161618069	-	BCAN_A0083	-	pterin-4-alpha-carbinolamine dehydratase
79	 55.61	0	88044..88649	+	201	161618070	-	BCAN_A0084	-	protein tyrosine phosphatase
80	 61.25	0	88559..89149	-	196	161618071	-	BCAN_A0085	-	2'-5' RNA ligase
81	 55.92	0	89330..90055	-	241	161618072	-	BCAN_A0086	-	arylesterase precursor
82	 61.73	+1	90202..90930	+	242	161618073	-	BCAN_A0087	-	ABC transporter related
83	 61.69	+1	90927..93476	+	849	161618074	-	BCAN_A0088	-	hypothetical protein
84	 57.99	0	93711..94448	+	245	161618075	-	BCAN_A0090	-	hypothetical protein
85	 59.44	0	94563..95102	+	179	161618076	pat	BCAN_A0091	-	phosphinothricin N-acetyltransferase
86	 54.73	0	95122..95523	-	133	161618077	-	BCAN_A0092	-	hypothetical protein
87	 56.87	0	96073..96807	-	244	161618078	-	BCAN_A0093	-	hypothetical protein
88	 56.74	0	96960..97100	-	46	161618079	-	BCAN_A0094	-	hypothetical protein
89	 60.27	0	97084..99771	-	895	161618080	acnA	BCAN_A0095	-	aconitate hydratase
90	 58.18	0	100115..100762	+	215	161618081	ccmA	BCAN_A0096	-	cytochrome c biogenesis protein CcmA
91	 62.31	+1	100762..101427	+	221	161618082	ccmB	BCAN_A0097	-	heme exporter protein CcmB
92	 58.52	0	101485..102270	+	261	161618083	ccmC	BCAN_A0098	-	heme exporter protein CcmC
93	 56.90	0	102267..102440	+	57	161618084	-	BCAN_A0099	-	Heme exporter protein D (CcmD)
94	 59.31	0	102437..103048	+	203	161618085	dsbE	BCAN_A0100	-	DsbE subfamily periplasmic protein thiol:disulfide oxidoreductase
95	 56.67	0	103235..103354	+	39	161618086	-	BCAN_A0101	-	hypothetical protein
96	 61.00	0	103297..105132	-	611	161618087	ilvD	BCAN_A0102	-	dihydroxy-acid dehydratase
97	 54.35	0	105314..105451	+	45	161618088	-	BCAN_A0103	-	hypothetical protein
98	 61.11	0	105532..105963	-	143	161618089	-	BCAN_A0104	-	hypothetical protein
99	 59.79	0	105990..106367	-	125	161618090	-	BCAN_A0105	-	response regulator receiver protein
100	 49.37	-1	106542..106778	-	78	161618091	-	BCAN_A0106	-	AsnC family transcriptional regulator
101	 57.04	0	107431..107835	+	134	161618092	-	BCAN_A0107	-	hypothetical protein
102	 57.02	0	107921..108625	-	234	161618093	-	BCAN_A0108	-	hypothetical protein
103	 53.85	0	108697..109515	+	272	161618094	-	BCAN_A0109	-	hypothetical protein
104	 57.63	0	109793..110821	+	342	161618095	-	BCAN_A0110	-	sulfate ABC transporter, sulfate-binding protein
105	 59.40	0	110916..111782	+	288	161618096	cysT	BCAN_A0111	-	sulfate ABC transporter, permease protein CysT
106	 59.05	0	111772..112638	+	288	161618097	cysW	BCAN_A0112	-	sulfate ABC transporter, permease protein CysW
107	 61.39	+1	112736..113815	+	359	161618098	cysA	BCAN_A0113	-	sulfate ABC transporter, ATP-binding protein
108	 60.51	0	114201..122804	+	2867	161618099	-	BCAN_A0114	-	glycosyltransferase 36
109	 58.47	0	122894..124198	+	434	161618100	pncB	BCAN_A0115	-	nicotinate phosphoribosyltransferase
110	 60.65	0	124240..125070	-	276	161618101	-	BCAN_A0116	-	PhzF family phenazine biosynthesis protein
111	 55.77	0	125180..125968	-	262	161618102	-	BCAN_A0117	-	methyltransferase type 11
112	 59.44	0	125991..126917	-	308	161618103	frk	BCAN_A0118	-	fructokinase
113	 59.60	0	127008..127814	-	268	161618104	-	BCAN_A0119	-	short-chain dehydrogenase/reductase SDR
114	 60.03	0	127935..130226	-	763	161618105	-	BCAN_A0120	-	1A family penicillin-binding protein
115	 56.13	0	130431..131123	-	230	161618106	ropB	BCAN_A0121	-	22 kDa outer membrane protein precursor
116	 56.19	0	131390..132076	-	228	161618107	ropB	BCAN_A0122	-	22 kDa outer membrane protein precursor
117	 56.15	0	132308..132925	-	205	161618108	-	BCAN_A0123	-	hypothetical protein
118	 59.39	0	132964..134379	-	471	161618109	-	BCAN_A0124	-	hypothetical protein
119	 52.61	-1	134610..134858	+	82	161618110	-	BCAN_A0125	-	hypothetical protein
120	 59.49	0	134940..137879	+	979	161618111	polA	BCAN_A0126	-	DNA polymerase I
121	 60.18	0	138021..139901	+	626	161618112	ydbR	BCAN_A0127	-	DEAD-box ATP-dependent RNA helicase ydbR
122	 59.66	0	139997..142438	-	813	161618113	gyrB	BCAN_A0128	-	DNA gyrase subunit B
123	 50.00	-1	142489..142656	-	55	161618114	-	BCAN_A0129	-	hypothetical protein
124	 57.95	0	142760..143596	-	278	161618115	fghA	BCAN_A0130	-	S-formylglutathione hydrolase
125	 57.84	0	143604..144260	-	218	161618116	-	BCAN_A0131	-	hypothetical protein
126	 56.84	0	144260..144727	-	155	161618117	-	BCAN_A0132	-	GCN5-related N-acetyltransferase
127	 61.19	0	144727..145839	-	370	161618118	-	BCAN_A0133	-	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase
128	 57.33	0	145736..145885	+	49	161618119	-	BCAN_A0134	-	hypothetical protein
129	 58.60	0	145873..146157	-	94	161618120	-	BCAN_A0135	-	hypothetical protein
130	 60.94	0	148833..150125	+	430	161618121	regB	BCAN_A0137	-	sensor histidine kinase regB
131	 58.27	0	150195..150563	+	122	161618122	-	BCAN_A0138	-	transposase for insertion sequence element IS6501
132	 58.01	0	150217..150528	+	103	161618123	-	BCAN_A0139	-	IS711, transposase orfA
133	 50.36	-1	150560..150970	+	136	161618124	-	BCAN_A0140	-	transposase for insertion sequence element IS6501
134	 50.74	-1	151019..151357	+	112	161618125	-	BCAN_A0141	-	hypothetical protein
135	 60.64	0	151553..152116	+	187	161618126	regA	BCAN_A0142	-	photosynthetic apparatus regulatory protein regA
136	 63.70	+1	152122..152424	-	100	161618127	-	BCAN_A0143	-	hypothetical protein
137	 57.17	0	152886..153506	+	206	161618128	-	BCAN_A0144	-	ErfK/YbiS/YcfS/YnhG family protein
138	 59.51	0	153596..154168	-	190	161618129	-	BCAN_A0145	-	HIRA-interacting protein 5
139	 60.93	0	154277..154816	-	179	161618130	-	BCAN_A0146	-	UspA domain-containing protein
140	 59.33	0	154823..155980	-	385	161618131	trpS	BCAN_A0147	-	tryptophanyl-tRNA synthetase
141	 59.94	0	155987..157576	-	529	161618132	mviN	BCAN_A0148	-	integral membrane protein MviN
142	 58.47	0	157590..160394	-	934	161618133	glnD	BCAN_A0149	-	PII uridylyl-transferase
143	 45.83	-2	160460..160555	+	31	161618134	-	BCAN_A0150	-	hypothetical protein
144	 60.56	0	162966..165698	+	910	161618135	mutS	BCAN_A0152	-	DNA mismatch repair protein
145	 58.39	0	166004..166897	-	297	161618136	-	BCAN_A0153	-	hypothetical protein
146	 52.80	-1	167172..167654	-	160	161618137	lspA	BCAN_A0154	-	signal peptidase II
147	 60.18	0	167656..168549	-	297	161618138	-	BCAN_A0155	-	tRNA/rRNA methyltransferase (SpoU)
148	 61.08	0	168546..169691	-	381	161618139	-	BCAN_A0156	-	hypothetical protein
149	 58.95	0	169804..170127	-	107	161618140	-	BCAN_A0157	-	hypothetical protein
150	 57.19	0	170137..170421	-	94	161618141	ihfB	BCAN_A0158	-	integration host factor subunit beta
151	 60.06	0	170468..171451	-	327	161618142	sppA	BCAN_A0159	-	signal peptide peptidase SppA, 36K type
152	 56.02	0	171913..172635	+	240	161618143	-	BCAN_A0160	-	hypothetical protein
153	 60.98	0	172958..173572	+	204	161618144	-	BCAN_A0161	-	hypothetical protein
154	 59.95	0	173584..174417	+	277	161618145	-	BCAN_A0162	-	ABC transporter ATP-binding protein
155	 57.75	0	174713..176215	+	500	161618146	rpoN	BCAN_A0163	-	RNA polymerase factor sigma-54
156	 46.99	-2	176364..176729	-	121	161618147	-	BCAN_A0164	-	hypothetical protein
157	 58.92	0	176965..177558	+	197	161618148	yfiA	BCAN_A0165	-	ribosomal subunit interface protein
158	 58.49	0	177661..178125	+	154	161618149	ptsN	BCAN_A0166	-	PTS IIA-like nitrogen-regulatory protein PtsN
159	 58.54	0	178206..178451	-	81	161618150	-	BCAN_A0167	-	hypothetical protein
160	 56.50	0	178557..178979	-	140	161618151	hspD	BCAN_A0168	-	small heat shock protein hspD
161	 49.25	-1	179070..179270	-	66	161618152	-	BCAN_A0169	-	hypothetical protein
162	 58.05	0	179251..179865	-	204	161618153	-	BCAN_A0170	-	hypothetical protein
163	 60.51	0	179853..180599	+	248	161618154	nth	BCAN_A0171	-	endonuclease III
164	 58.40	0	180640..181353	-	237	161618155	-	BCAN_A0172	-	CysZ-like protein
165	 59.00	0	181350..181610	-	86	161618156	-	BCAN_A0173	-	hypothetical protein
166	 59.92	0	181613..182605	+	330	161618157	-	BCAN_A0174	-	fructokinase-2
167	 59.97	0	182624..183280	-	218	161618158	-	BCAN_A0175	-	hypothetical protein
168	 59.45	0	183413..184105	-	230	161618159	grpE	BCAN_A0176	-	protein grpE
169	 59.85	0	184211..185281	-	356	161618160	hrcA	BCAN_A0177	-	heat-inducible transcription repressor
57.15	MEAN

4.17	STD DEV



Last Updated: Dec 04, 2008

Funding for this work was provided by the Peter Wall Institute for Advanced Studies. This service is hosted by the Brinkman Laboratory of the Department of Molecular Biology and Biochemistry at Simon Fraser University.